Gene annotation
Transcriptome id Sobic.003G082300.1
Synonym HSP17.4, Sb03g006910, ATHSP17.4
Functional annotation hsp20/alpha crystallin family protein, putative, expressed
UniProt C5XQS3
Pfam PF00011
Panther DB PTHR11527 PTHR11527:SF141
NCBI CDD -
KEGG Orthology K13993; HSP20 family protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G53540 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os01g04350.1 : hsp20/alpha crystallin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a023565
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G082300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G103700 nitrilase-associated protein, putative, expressed K18635: protein SPIRAL1 and related proteins
2 Sobic.003G380000 expressed protein -
3 Sobic.001G398700 expressed protein -
4 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
5 Sobic.001G040800 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
6 Sobic.006G180200 transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
7 Sobic.010G178200 hemoglobin-like protein HbO, putative, expressed -
8 Sobic.001G131400 thioesterase family protein, putative, expressed -
9 Sobic.003G306100 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
10 Sobic.004G157000 protein kinase domain containing protein, expressed K13430: serine/threonine-protein kinase PBS1
11 Sobic.004G055200 phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
12 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
13 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
14 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
15 Sobic.006G131400 expressed protein -
16 Sobic.008G033600 Pyruvate kinase family protein(PubMedID : 26465154)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
17 Sobic.001G124600 - -
18 Sobic.001G335400 protein of unknown function DUF1675 domain containing protein, expressed -
19 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
20 Sobic.004G332900 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3


Gene co-expression network
sample Sobic003G082300 Sobic003G082300 Sobic008G103700 Sobic008G103700 Sobic003G082300--Sobic008G103700 Sobic003G380000 Sobic003G380000 Sobic003G082300--Sobic003G380000 Sobic001G398700 Sobic001G398700 Sobic003G082300--Sobic001G398700 Sobic003G285800 Sobic003G285800 Sobic003G082300--Sobic003G285800 Sobic001G040800 Sobic001G040800 Sobic003G082300--Sobic001G040800 Sobic006G180200 Sobic006G180200 Sobic003G082300--Sobic006G180200 Sobic010G178200 Sobic010G178200 Sobic003G082300--Sobic010G178200 Sobic001G131400 Sobic001G131400 Sobic003G082300--Sobic001G131400 Sobic003G306100 Sobic003G306100 Sobic003G082300--Sobic003G306100 Sobic004G024300 Sobic004G024300 Sobic008G103700--Sobic004G024300 Sobic001G034700 Sobic001G034700 Sobic008G103700--Sobic001G034700 Sobic010G238800 Sobic010G238800 Sobic008G103700--Sobic010G238800 Sobic008G103700--Sobic003G306100 Sobic003G344600 Sobic003G344600 Sobic008G103700--Sobic003G344600 Sobic003G443300 Sobic003G443300 Sobic008G103700--Sobic003G443300 Sobic002G335300 Sobic002G335300 Sobic008G103700--Sobic002G335300 Sobic002G128800 Sobic002G128800 Sobic008G103700--Sobic002G128800 Sobic001G432000 Sobic001G432000 Sobic008G103700--Sobic001G432000 Sobic010G232100 Sobic010G232100 Sobic003G380000--Sobic010G232100 Sobic005G228000 Sobic005G228000 Sobic003G380000--Sobic005G228000 Sobic002G345300 Sobic002G345300 Sobic003G380000--Sobic002G345300 Sobic003G380000--Sobic010G178200 Sobic003G380000--Sobic003G285800 Sobic010G135000 Sobic010G135000 Sobic003G380000--Sobic010G135000 Sobic009G046600 Sobic009G046600 Sobic003G380000--Sobic009G046600 Sobic004G157000 Sobic004G157000 Sobic003G380000--Sobic004G157000 Sobic002G046100 Sobic002G046100 Sobic003G380000--Sobic002G046100 Sobic001G398700--Sobic010G135000 Sobic001G067601 Sobic001G067601 Sobic001G398700--Sobic001G067601 Sobic001G398700--Sobic010G178200 Sobic001G398700--Sobic002G345300 Sobic009G023200 Sobic009G023200 Sobic001G398700--Sobic009G023200 Sobic001G398700--Sobic005G228000 Sobic001G477300 Sobic001G477300 Sobic001G398700--Sobic001G477300 Sobic003G162700 Sobic003G162700 Sobic001G398700--Sobic003G162700 Sobic001G533300 Sobic001G533300 Sobic001G398700--Sobic001G533300 Sobic003G285800--Sobic002G046100 Sobic002G187500 Sobic002G187500 Sobic003G285800--Sobic002G187500 Sobic003G285800--Sobic010G178200 Sobic003G350300 Sobic003G350300 Sobic003G285800--Sobic003G350300 Sobic003G285800--Sobic002G345300 Sobic003G285800--Sobic001G477300 Sobic001G281400 Sobic001G281400 Sobic003G285800--Sobic001G281400 Sobic010G086200 Sobic010G086200 Sobic003G285800--Sobic010G086200 Sobic009G129000 Sobic009G129000 Sobic003G285800--Sobic009G129000 Sobic002G194100 Sobic002G194100 Sobic001G040800--Sobic002G194100 Sobic003G253000 Sobic003G253000 Sobic001G040800--Sobic003G253000 Sobic009G001400 Sobic009G001400 Sobic001G040800--Sobic009G001400 Sobic002G363100 Sobic002G363100 Sobic001G040800--Sobic002G363100 Sobic002G202300 Sobic002G202300 Sobic001G040800--Sobic002G202300 Sobic003G130800 Sobic003G130800 Sobic001G040800--Sobic003G130800 Sobic002G355300 Sobic002G355300 Sobic001G040800--Sobic002G355300 Sobic007G114200 Sobic007G114200 Sobic001G040800--Sobic007G114200 Sobic007G088000 Sobic007G088000 Sobic001G040800--Sobic007G088000 Sobic006G180200--Sobic003G130800 Sobic006G180200--Sobic010G135000 Sobic009G185800 Sobic009G185800 Sobic006G180200--Sobic009G185800 Sobic004G055200 Sobic004G055200 Sobic006G180200--Sobic004G055200 Sobic006G180200--Sobic001G131400 Sobic008G033600 Sobic008G033600 Sobic006G180200--Sobic008G033600 Sobic004G187900 Sobic004G187900 Sobic006G180200--Sobic004G187900 Sobic003G181500 Sobic003G181500 Sobic006G180200--Sobic003G181500 Sobic008G189300 Sobic008G189300 Sobic006G180200--Sobic008G189300 Sobic010G178200--Sobic002G345300 Sobic010G178200--Sobic003G285800 Sobic010G178200--Sobic003G350300 Sobic010G041600 Sobic010G041600 Sobic010G178200--Sobic010G041600 Sobic010G178200--Sobic001G034700 Sobic010G178200--Sobic001G281400 Sobic010G178200--Sobic002G046100 Sobic010G274900 Sobic010G274900 Sobic010G178200--Sobic010G274900 Sobic007G087200 Sobic007G087200 Sobic010G178200--Sobic007G087200 Sobic001G131400--Sobic006G180200 Sobic001G353600 Sobic001G353600 Sobic001G131400--Sobic001G353600 Sobic001G131400--Sobic010G178200 Sobic009G038100 Sobic009G038100 Sobic001G131400--Sobic009G038100 Sobic001G074300 Sobic001G074300 Sobic001G131400--Sobic001G074300 Sobic009G176000 Sobic009G176000 Sobic001G131400--Sobic009G176000 Sobic004G151400 Sobic004G151400 Sobic001G131400--Sobic004G151400 Sobic001G131400--Sobic008G189300 Sobic001G131400--Sobic010G135000 Sobic001G351000 Sobic001G351000 Sobic003G306100--Sobic001G351000 Sobic004G065500 Sobic004G065500 Sobic003G306100--Sobic004G065500 Sobic003G306100--Sobic001G034700 Sobic003G306100--Sobic003G285800 Sobic003G306100--Sobic010G041600 Sobic003G150000 Sobic003G150000 Sobic003G306100--Sobic003G150000 Sobic003G306100--Sobic001G477300 Sobic003G306100--Sobic010G086200 Sobic005G168100 Sobic005G168100 Sobic003G306100--Sobic005G168100
Octagon: transcription factors


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