Gene annotation
Transcriptome id Sobic.003G190900.1
Synonym Sb03g025510
Functional annotation expressed protein
UniProt C5XNN5
Pfam -
Panther DB PTHR37175 PTHR37175:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07020 : -
RAP-DB (Rice) LOC_Os01g38490.1 : expressed protein
MaizeGDB (Corn) Zm00025a028419
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G126200 mitosis protein dim1, putative, expressed K12859: TXNL4A, U5 snRNP protein, DIM1 family
2 Sobic.004G352900 expressed protein -
3 Sobic.004G309500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.010G237000 coiled-coil domain-containing protein 72, putative, expressed -
5 Sobic.010G042800 peptidase, T1 family, putative, expressed K02737: 20S proteasome subunit beta 5
6 Sobic.008G097401 - -
7 Sobic.006G266100 expressed protein -
8 Sobic.006G008400 receptor protein kinase, putative, expressed -
9 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2
10 Sobic.004G310900 emp24/gp25L/p24 family protein, putative, expressed -
11 Sobic.001G294000 LOL3, putative, expressed -
12 Sobic.002G123200 DNA directed RNA polymerase, 7 kDa subunit domain containing protein, expressed K03009: RPB12, DNA-directed RNA polymerases I, II, and III subunit RPABC4
13 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
14 Sobic.006G262900 expressed protein -
15 Sobic.001G129300 ribosomal L18p/L5e family protein, putative, expressed -
16 Sobic.004G260400 expressed protein K07018: uncharacterized protein
17 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
18 Sobic.010G029400 peptidase, T1 family, putative, expressed K02738: 20S proteasome subunit beta 1
19 Sobic.006G052400 LSM domain containing protein, expressed K12625: U6 snRNA-associated Sm-like protein LSm6
20 Sobic.004G014000 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic003G190900 Sobic003G190900 Sobic007G126200 Sobic007G126200 Sobic003G190900--Sobic007G126200 Sobic004G352900 Sobic004G352900 Sobic003G190900--Sobic004G352900 Sobic004G309500 Sobic004G309500 Sobic003G190900--Sobic004G309500 Sobic010G237000 Sobic010G237000 Sobic003G190900--Sobic010G237000 Sobic010G042800 Sobic010G042800 Sobic003G190900--Sobic010G042800 Sobic008G097401 Sobic008G097401 Sobic003G190900--Sobic008G097401 Sobic006G266100 Sobic006G266100 Sobic003G190900--Sobic006G266100 Sobic006G008400 Sobic006G008400 Sobic003G190900--Sobic006G008400 Sobic005G157200 Sobic005G157200 Sobic003G190900--Sobic005G157200 Sobic001G149700 Sobic001G149700 Sobic007G126200--Sobic001G149700 Sobic010G071200 Sobic010G071200 Sobic007G126200--Sobic010G071200 Sobic009G036900 Sobic009G036900 Sobic007G126200--Sobic009G036900 Sobic003G273100 Sobic003G273100 Sobic007G126200--Sobic003G273100 Sobic004G231400 Sobic004G231400 Sobic007G126200--Sobic004G231400 Sobic010G055500 Sobic010G055500 Sobic007G126200--Sobic010G055500 Sobic003G116700 Sobic003G116700 Sobic007G126200--Sobic003G116700 Sobic002G068300 Sobic002G068300 Sobic007G126200--Sobic002G068300 Sobic001G350501 Sobic001G350501 Sobic007G126200--Sobic001G350501 Sobic002G427900 Sobic002G427900 Sobic004G352900--Sobic002G427900 Sobic009G156300 Sobic009G156300 Sobic004G352900--Sobic009G156300 Sobic004G014000 Sobic004G014000 Sobic004G352900--Sobic004G014000 Sobic010G066300 Sobic010G066300 Sobic004G352900--Sobic010G066300 Sobic002G254650 Sobic002G254650 Sobic004G352900--Sobic002G254650 Sobic001G536500 Sobic001G536500 Sobic004G352900--Sobic001G536500 Sobic002G117200 Sobic002G117200 Sobic004G352900--Sobic002G117200 Sobic010G029400 Sobic010G029400 Sobic004G352900--Sobic010G029400 Sobic009G131100 Sobic009G131100 Sobic004G352900--Sobic009G131100 Sobic005G000100 Sobic005G000100 Sobic004G309500--Sobic005G000100 Sobic004G309500--Sobic002G117200 Sobic004G309500--Sobic004G352900 Sobic003G401400 Sobic003G401400 Sobic004G309500--Sobic003G401400 Sobic004G309500--Sobic009G156300 Sobic001G321500 Sobic001G321500 Sobic004G309500--Sobic001G321500 Sobic001G202400 Sobic001G202400 Sobic004G309500--Sobic001G202400 Sobic004G309500--Sobic004G014000 Sobic001G022600 Sobic001G022600 Sobic004G309500--Sobic001G022600 Sobic009G016201 Sobic009G016201 Sobic010G237000--Sobic009G016201 Sobic003G344600 Sobic003G344600 Sobic010G237000--Sobic003G344600 Sobic001G037000 Sobic001G037000 Sobic010G237000--Sobic001G037000 Sobic002G330000 Sobic002G330000 Sobic010G237000--Sobic002G330000 Sobic001G128400 Sobic001G128400 Sobic010G237000--Sobic001G128400 Sobic003G249800 Sobic003G249800 Sobic010G237000--Sobic003G249800 Sobic002G282400 Sobic002G282400 Sobic010G237000--Sobic002G282400 Sobic003G254800 Sobic003G254800 Sobic010G237000--Sobic003G254800 Sobic003G350300 Sobic003G350300 Sobic010G237000--Sobic003G350300 Sobic004G310900 Sobic004G310900 Sobic010G042800--Sobic004G310900 Sobic002G263800 Sobic002G263800 Sobic010G042800--Sobic002G263800 Sobic010G042800--Sobic005G157200 Sobic002G406500 Sobic002G406500 Sobic010G042800--Sobic002G406500 Sobic004G066800 Sobic004G066800 Sobic010G042800--Sobic004G066800 Sobic004G032000 Sobic004G032000 Sobic010G042800--Sobic004G032000 Sobic001G331900 Sobic001G331900 Sobic010G042800--Sobic001G331900 Sobic003G129800 Sobic003G129800 Sobic010G042800--Sobic003G129800 Sobic010G042800--Sobic001G128400 Sobic002G296300 Sobic002G296300 Sobic008G097401--Sobic002G296300 Sobic009G198500 Sobic009G198500 Sobic008G097401--Sobic009G198500 Sobic001G078500 Sobic001G078500 Sobic008G097401--Sobic001G078500 Sobic010G121300 Sobic010G121300 Sobic008G097401--Sobic010G121300 Sobic004G339200 Sobic004G339200 Sobic008G097401--Sobic004G339200 Sobic001G403700 Sobic001G403700 Sobic008G097401--Sobic001G403700 Sobic004G300900 Sobic004G300900 Sobic008G097401--Sobic004G300900 Sobic002G078400 Sobic002G078400 Sobic008G097401--Sobic002G078400 Sobic003G124800 Sobic003G124800 Sobic008G097401--Sobic003G124800 Sobic002G266800 Sobic002G266800 Sobic006G266100--Sobic002G266800 Sobic001G148700 Sobic001G148700 Sobic006G266100--Sobic001G148700 Sobic002G279000 Sobic002G279000 Sobic006G266100--Sobic002G279000 Sobic002G116200 Sobic002G116200 Sobic006G266100--Sobic002G116200 Sobic009G199700 Sobic009G199700 Sobic006G266100--Sobic009G199700 Sobic002G378401 Sobic002G378401 Sobic006G266100--Sobic002G378401 Sobic002G090700 Sobic002G090700 Sobic006G266100--Sobic002G090700 Sobic001G216701 Sobic001G216701 Sobic006G266100--Sobic001G216701 Sobic001G392800 Sobic001G392800 Sobic006G266100--Sobic001G392800 Sobic009G238900 Sobic009G238900 Sobic006G008400--Sobic009G238900 Sobic001G096100 Sobic001G096100 Sobic006G008400--Sobic001G096100 Sobic006G002700 Sobic006G002700 Sobic006G008400--Sobic006G002700 Sobic001G304400 Sobic001G304400 Sobic006G008400--Sobic001G304400 Sobic006G038200 Sobic006G038200 Sobic006G008400--Sobic006G038200 Sobic009G062000 Sobic009G062000 Sobic006G008400--Sobic009G062000 Sobic003G206700 Sobic003G206700 Sobic006G008400--Sobic003G206700 Sobic001G168600 Sobic001G168600 Sobic006G008400--Sobic001G168600 Sobic001G289100 Sobic001G289100 Sobic006G008400--Sobic001G289100 Sobic008G058300 Sobic008G058300 Sobic005G157200--Sobic008G058300 Sobic005G157200--Sobic001G331900 Sobic001G377800 Sobic001G377800 Sobic005G157200--Sobic001G377800 Sobic003G025200 Sobic003G025200 Sobic005G157200--Sobic003G025200 Sobic005G157200--Sobic002G406500 Sobic007G163700 Sobic007G163700 Sobic005G157200--Sobic007G163700 Sobic005G157200--Sobic010G029400 Sobic004G107600 Sobic004G107600 Sobic005G157200--Sobic004G107600 Sobic001G529000 Sobic001G529000 Sobic005G157200--Sobic001G529000
Octagon: transcription factors


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