Gene annotation
Transcriptome id Sobic.003G292866.1
Synonym -
Functional annotation -
UniProt A0A1W0VZI4
Pfam -
Panther DB PTHR11909 PTHR11909:SF73
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G25760 : Protein kinase family protein
RAP-DB (Rice) LOC_Os01g54100.1 : CK1_CaseinKinase_1a.2 - CK1 includes the casein kinase 1 kinases, expressed
MaizeGDB (Corn) -
Brachypodium KQK09697
Barley HORVU3Hr1G070920.9 , HORVU3Hr1G070920.8 , HORVU3Hr1G070920.5 , HORVU3Hr1G070920.4 , HORVU3Hr1G070920.7 , HORVU3Hr1G070920.6 , HORVU3Hr1G070920.1 , HORVU3Hr1G070920.3 , HORVU3Hr1G070920.2 , HORVU3Hr1G070920.20 , HORVU3Hr1G070920.21 , HORVU3Hr1G070920.22 , HORVU3Hr1G070920.23 , HORVU3Hr1G070920.19 , HORVU3Hr1G070920.18 , HORVU3Hr1G070920.11 , HORVU3Hr1G070920.10 , HORVU3Hr1G070920.13 , HORVU3Hr1G070920.12 , HORVU3Hr1G070920.15 , HORVU3Hr1G070920.14 , HORVU3Hr1G070920.17 , HORVU3Hr1G070920.16
Wheat TraesCS3D02G275000 , TraesCS3B02G308800 , TraesCS3A02G275100 , TraesCS3D02G275000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G122200 zinc finger protein, putative, expressed K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
2 Sobic.007G031800 expressed protein -
3 Sobic.002G429400 PPR repeat containing protein, expressed -
4 Sobic.008G150200 PPR repeat domain containing protein, putative, expressed -
5 Sobic.003G214300 expressed protein -
6 Sobic.005G154700 OsFBX407 - F-box domain containing protein, expressed -
7 Sobic.004G010800 - -
8 Sobic.004G152601 - -
9 Sobic.001G396800 peptide chain release factor protein, putative, expressed K02836: peptide chain release factor 2
10 Sobic.004G204200 EMB2423, putative, expressed K11137: TELO2, telomere length regulation protein
11 Sobic.008G000800 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
12 Sobic.003G374500 pentatricopeptide repeat domain containing protein, putative, expressed -
13 Sobic.001G072200 metallo-beta-lactamase family protein, putative, expressed -
14 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
15 Sobic.007G120500 Sec1 family transport protein, putative, expressed K12479: vacuolar protein sorting-associated protein 45
16 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
17 Sobic.002G389200 pentatricopeptide repeat domain containing protein, putative, expressed -
18 Sobic.002G142600 NLI interacting factor-like phosphatase, putative, expressed -
19 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
20 Sobic.002G183300 GTP binding protein, putative, expressed -


Gene co-expression network
sample Sobic003G292866 Sobic003G292866 Sobic001G122200 Sobic001G122200 Sobic003G292866--Sobic001G122200 Sobic007G031800 Sobic007G031800 Sobic003G292866--Sobic007G031800 Sobic002G429400 Sobic002G429400 Sobic003G292866--Sobic002G429400 Sobic008G150200 Sobic008G150200 Sobic003G292866--Sobic008G150200 Sobic003G214300 Sobic003G214300 Sobic003G292866--Sobic003G214300 Sobic005G154700 Sobic005G154700 Sobic003G292866--Sobic005G154700 Sobic004G010800 Sobic004G010800 Sobic003G292866--Sobic004G010800 Sobic004G152601 Sobic004G152601 Sobic003G292866--Sobic004G152601 Sobic001G396800 Sobic001G396800 Sobic003G292866--Sobic001G396800 Sobic008G163400 Sobic008G163400 Sobic001G122200--Sobic008G163400 Sobic010G068900 Sobic010G068900 Sobic001G122200--Sobic010G068900 Sobic004G282500 Sobic004G282500 Sobic001G122200--Sobic004G282500 Sobic004G241000 Sobic004G241000 Sobic001G122200--Sobic004G241000 Sobic006G262800 Sobic006G262800 Sobic001G122200--Sobic006G262800 Sobic001G268300 Sobic001G268300 Sobic001G122200--Sobic001G268300 Sobic001G122200--Sobic001G396800 Sobic006G069100 Sobic006G069100 Sobic001G122200--Sobic006G069100 Sobic001G149100 Sobic001G149100 Sobic001G122200--Sobic001G149100 Sobic009G117300 Sobic009G117300 Sobic007G031800--Sobic009G117300 Sobic009G117400 Sobic009G117400 Sobic007G031800--Sobic009G117400 Sobic007G071950 Sobic007G071950 Sobic007G031800--Sobic007G071950 Sobic001G498200 Sobic001G498200 Sobic007G031800--Sobic001G498200 Sobic009G225200 Sobic009G225200 Sobic007G031800--Sobic009G225200 Sobic005G173366 Sobic005G173366 Sobic007G031800--Sobic005G173366 Sobic003G258900 Sobic003G258900 Sobic007G031800--Sobic003G258900 Sobic007G129401 Sobic007G129401 Sobic007G031800--Sobic007G129401 Sobic001G464200 Sobic001G464200 Sobic007G031800--Sobic001G464200 Sobic004G289400 Sobic004G289400 Sobic002G429400--Sobic004G289400 Sobic006G180700 Sobic006G180700 Sobic002G429400--Sobic006G180700 Sobic003G006400 Sobic003G006400 Sobic002G429400--Sobic003G006400 Sobic001G413800 Sobic001G413800 Sobic002G429400--Sobic001G413800 Sobic003G014700 Sobic003G014700 Sobic002G429400--Sobic003G014700 Sobic008G098600 Sobic008G098600 Sobic002G429400--Sobic008G098600 Sobic005G028300 Sobic005G028300 Sobic002G429400--Sobic005G028300 Sobic001G334100 Sobic001G334100 Sobic002G429400--Sobic001G334100 Sobic002G429400--Sobic001G122200 Sobic001G305400 Sobic001G305400 Sobic008G150200--Sobic001G305400 Sobic002G060500 Sobic002G060500 Sobic008G150200--Sobic002G060500 Sobic002G221200 Sobic002G221200 Sobic008G150200--Sobic002G221200 Sobic001G261480 Sobic001G261480 Sobic008G150200--Sobic001G261480 Sobic004G200866 Sobic004G200866 Sobic008G150200--Sobic004G200866 Sobic001G240400 Sobic001G240400 Sobic008G150200--Sobic001G240400 Sobic005G142200 Sobic005G142200 Sobic008G150200--Sobic005G142200 Sobic004G121000 Sobic004G121000 Sobic008G150200--Sobic004G121000 Sobic009G101600 Sobic009G101600 Sobic008G150200--Sobic009G101600 Sobic006G142400 Sobic006G142400 Sobic003G214300--Sobic006G142400 Sobic003G214300--Sobic008G098600 Sobic001G499000 Sobic001G499000 Sobic003G214300--Sobic001G499000 Sobic004G072800 Sobic004G072800 Sobic003G214300--Sobic004G072800 Sobic010G264000 Sobic010G264000 Sobic003G214300--Sobic010G264000 Sobic009G131900 Sobic009G131900 Sobic003G214300--Sobic009G131900 Sobic010G247400 Sobic010G247400 Sobic003G214300--Sobic010G247400 Sobic001G061200 Sobic001G061200 Sobic003G214300--Sobic001G061200 Sobic007G162800 Sobic007G162800 Sobic003G214300--Sobic007G162800 Sobic004G012000 Sobic004G012000 Sobic005G154700--Sobic004G012000 Sobic004G026100 Sobic004G026100 Sobic005G154700--Sobic004G026100 Sobic004G197900 Sobic004G197900 Sobic005G154700--Sobic004G197900 Sobic009G040800 Sobic009G040800 Sobic005G154700--Sobic009G040800 Sobic005G015100 Sobic005G015100 Sobic005G154700--Sobic005G015100 Sobic005G127300 Sobic005G127300 Sobic005G154700--Sobic005G127300 Sobic009G000400 Sobic009G000400 Sobic005G154700--Sobic009G000400 Sobic010G235600 Sobic010G235600 Sobic005G154700--Sobic010G235600 Sobic007G079200 Sobic007G079200 Sobic005G154700--Sobic007G079200 Sobic004G010800--Sobic004G152601 Sobic005G019200 Sobic005G019200 Sobic004G010800--Sobic005G019200 Sobic002G114400 Sobic002G114400 Sobic004G010800--Sobic002G114400 Sobic001G489150 Sobic001G489150 Sobic004G010800--Sobic001G489150 Sobic004G204200 Sobic004G204200 Sobic004G010800--Sobic004G204200 Sobic003G366850 Sobic003G366850 Sobic004G010800--Sobic003G366850 Sobic005G043800 Sobic005G043800 Sobic004G010800--Sobic005G043800 Sobic003G374500 Sobic003G374500 Sobic004G010800--Sobic003G374500 Sobic006G051700 Sobic006G051700 Sobic004G010800--Sobic006G051700 Sobic008G106400 Sobic008G106400 Sobic004G152601--Sobic008G106400 Sobic008G065400 Sobic008G065400 Sobic004G152601--Sobic008G065400 Sobic003G201850 Sobic003G201850 Sobic004G152601--Sobic003G201850 Sobic004G152601--Sobic004G010800 Sobic001G262900 Sobic001G262900 Sobic004G152601--Sobic001G262900 Sobic003G429500 Sobic003G429500 Sobic004G152601--Sobic003G429500 Sobic010G184900 Sobic010G184900 Sobic004G152601--Sobic010G184900 Sobic010G148750 Sobic010G148750 Sobic004G152601--Sobic010G148750 Sobic008G045600 Sobic008G045600 Sobic004G152601--Sobic008G045600 Sobic001G396800--Sobic003G214300 Sobic001G396800--Sobic001G122200 Sobic006G056600 Sobic006G056600 Sobic001G396800--Sobic006G056600 Sobic001G396800--Sobic010G247400 Sobic009G193850 Sobic009G193850 Sobic001G396800--Sobic009G193850 Sobic003G407600 Sobic003G407600 Sobic001G396800--Sobic003G407600 Sobic001G396800--Sobic008G098600 Sobic001G041200 Sobic001G041200 Sobic001G396800--Sobic001G041200 Sobic004G011000 Sobic004G011000 Sobic001G396800--Sobic004G011000
Octagon: transcription factors


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