Gene annotation
Transcriptome id Sobic.003G302100.1
Synonym Sb03g035120
Functional annotation expressed protein
UniProt C5XKS8
Pfam PF05097
Panther DB PTHR33671 PTHR33671:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G29240 : Protein of unknown function (DUF688)
RAP-DB (Rice) LOC_Os01g55410.1 : expressed protein
MaizeGDB (Corn) Zm00025a027499
Brachypodium KQK09830
Barley -
Wheat TraesCS3D02G295500 , TraesCS3A02G306400 , TraesCS3A02G306400
Populus -


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cDNA sequences
Sobic.003G302100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G088000 RNA recognition motif containing protein, putative, expressed K14396: PABPN1, polyadenylate-binding protein 2
2 Sobic.001G405900 ranBP1 domain containing protein, expressed K15306: Ran-binding protein 1
3 Sobic.002G076866 - -
4 Sobic.005G121100 ZOS11-03 - C2H2 zinc finger protein, expressed -
5 Sobic.010G279000 expressed protein -
6 Sobic.009G218800 Divergent PAP2 family domain containing protein, expressed K09775: uncharacterized protein
7 Sobic.003G392200 CXE carboxylesterase, putative, expressed -
8 Sobic.001G429400 wibg, putative, expressed K14294: WIBG, partner of Y14 and mago
9 Sobic.001G230900 - K07910: Ras-related protein Rab-18
10 Sobic.008G141800 Probable galacturonosyltransferase 13(PubMedID : 26186930)@glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
11 Sobic.008G066000 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
12 Sobic.003G052400 proline-rich family protein, putative, expressed -
13 Sobic.001G324900 proline-rich family protein, putative, expressed -
14 Sobic.001G047100 OTU-like cysteine protease family protein, putative, expressed K18342: OTU domain-containing protein 6
15 Sobic.010G199100 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.004G054300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
17 Sobic.009G195900 OsFBT9 - F-box and tubby domain containing protein, expressed -
18 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
19 Sobic.010G105600 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
20 Sobic.009G229300 glycosyltransferase family 43 protein, putative, expressed -


Gene co-expression network
sample Sobic003G302100 Sobic003G302100 Sobic010G088000 Sobic010G088000 Sobic003G302100--Sobic010G088000 Sobic001G405900 Sobic001G405900 Sobic003G302100--Sobic001G405900 Sobic002G076866 Sobic002G076866 Sobic003G302100--Sobic002G076866 Sobic005G121100 Sobic005G121100 Sobic003G302100--Sobic005G121100 Sobic010G279000 Sobic010G279000 Sobic003G302100--Sobic010G279000 Sobic009G218800 Sobic009G218800 Sobic003G302100--Sobic009G218800 Sobic003G392200 Sobic003G392200 Sobic003G302100--Sobic003G392200 Sobic001G429400 Sobic001G429400 Sobic003G302100--Sobic001G429400 Sobic001G230900 Sobic001G230900 Sobic003G302100--Sobic001G230900 Sobic001G047100 Sobic001G047100 Sobic010G088000--Sobic001G047100 Sobic003G124800 Sobic003G124800 Sobic010G088000--Sobic003G124800 Sobic010G088000--Sobic009G218800 Sobic006G252200 Sobic006G252200 Sobic010G088000--Sobic006G252200 Sobic004G085200 Sobic004G085200 Sobic010G088000--Sobic004G085200 Sobic006G002700 Sobic006G002700 Sobic010G088000--Sobic006G002700 Sobic010G008100 Sobic010G008100 Sobic010G088000--Sobic010G008100 Sobic001G439600 Sobic001G439600 Sobic010G088000--Sobic001G439600 Sobic001G096100 Sobic001G096100 Sobic010G088000--Sobic001G096100 Sobic009G206700 Sobic009G206700 Sobic001G405900--Sobic009G206700 Sobic001G405900--Sobic010G279000 Sobic009G182300 Sobic009G182300 Sobic001G405900--Sobic009G182300 Sobic003G373100 Sobic003G373100 Sobic001G405900--Sobic003G373100 Sobic004G244800 Sobic004G244800 Sobic001G405900--Sobic004G244800 Sobic004G212300 Sobic004G212300 Sobic001G405900--Sobic004G212300 Sobic001G007600 Sobic001G007600 Sobic001G405900--Sobic001G007600 Sobic002G343500 Sobic002G343500 Sobic001G405900--Sobic002G343500 Sobic001G324900 Sobic001G324900 Sobic001G405900--Sobic001G324900 Sobic001G105500 Sobic001G105500 Sobic002G076866--Sobic001G105500 Sobic004G031600 Sobic004G031600 Sobic002G076866--Sobic004G031600 Sobic004G274400 Sobic004G274400 Sobic002G076866--Sobic004G274400 Sobic009G219000 Sobic009G219000 Sobic002G076866--Sobic009G219000 Sobic003G407200 Sobic003G407200 Sobic002G076866--Sobic003G407200 Sobic002G306000 Sobic002G306000 Sobic002G076866--Sobic002G306000 Sobic010G105600 Sobic010G105600 Sobic002G076866--Sobic010G105600 Sobic002G040700 Sobic002G040700 Sobic002G076866--Sobic002G040700 Sobic008G016900 Sobic008G016900 Sobic002G076866--Sobic008G016900 Sobic002G384200 Sobic002G384200 Sobic005G121100--Sobic002G384200 Sobic003G022800 Sobic003G022800 Sobic005G121100--Sobic003G022800 Sobic007G213600 Sobic007G213600 Sobic005G121100--Sobic007G213600 Sobic006G075801 Sobic006G075801 Sobic005G121100--Sobic006G075801 Sobic006G180600 Sobic006G180600 Sobic005G121100--Sobic006G180600 Sobic004G342900 Sobic004G342900 Sobic005G121100--Sobic004G342900 Sobic005G121100--Sobic001G324900 Sobic002G005700 Sobic002G005700 Sobic005G121100--Sobic002G005700 Sobic005G121100--Sobic001G405900 Sobic001G196100 Sobic001G196100 Sobic010G279000--Sobic001G196100 Sobic002G309500 Sobic002G309500 Sobic010G279000--Sobic002G309500 Sobic001G230100 Sobic001G230100 Sobic010G279000--Sobic001G230100 Sobic010G279000--Sobic001G405900 Sobic001G116000 Sobic001G116000 Sobic010G279000--Sobic001G116000 Sobic001G035400 Sobic001G035400 Sobic010G279000--Sobic001G035400 Sobic003G217100 Sobic003G217100 Sobic010G279000--Sobic003G217100 Sobic010G038700 Sobic010G038700 Sobic010G279000--Sobic010G038700 Sobic010G279000--Sobic001G007600 Sobic004G014000 Sobic004G014000 Sobic009G218800--Sobic004G014000 Sobic001G294000 Sobic001G294000 Sobic009G218800--Sobic001G294000 Sobic004G300900 Sobic004G300900 Sobic009G218800--Sobic004G300900 Sobic004G272300 Sobic004G272300 Sobic009G218800--Sobic004G272300 Sobic009G198500 Sobic009G198500 Sobic009G218800--Sobic009G198500 Sobic008G097401 Sobic008G097401 Sobic009G218800--Sobic008G097401 Sobic004G305600 Sobic004G305600 Sobic009G218800--Sobic004G305600 Sobic009G249000 Sobic009G249000 Sobic009G218800--Sobic009G249000 Sobic001G529000 Sobic001G529000 Sobic009G218800--Sobic001G529000 Sobic007G178200 Sobic007G178200 Sobic003G392200--Sobic007G178200 Sobic007G188100 Sobic007G188100 Sobic003G392200--Sobic007G188100 Sobic001G525400 Sobic001G525400 Sobic003G392200--Sobic001G525400 Sobic002G270700 Sobic002G270700 Sobic003G392200--Sobic002G270700 Sobic002G197600 Sobic002G197600 Sobic003G392200--Sobic002G197600 Sobic009G171100 Sobic009G171100 Sobic003G392200--Sobic009G171100 Sobic001G081600 Sobic001G081600 Sobic003G392200--Sobic001G081600 Sobic002G395600 Sobic002G395600 Sobic003G392200--Sobic002G395600 Sobic001G063600 Sobic001G063600 Sobic003G392200--Sobic001G063600 Sobic004G072800 Sobic004G072800 Sobic001G429400--Sobic004G072800 Sobic003G024800 Sobic003G024800 Sobic001G429400--Sobic003G024800 Sobic010G211300 Sobic010G211300 Sobic001G429400--Sobic010G211300 Sobic003G045400 Sobic003G045400 Sobic001G429400--Sobic003G045400 Sobic003G043100 Sobic003G043100 Sobic001G429400--Sobic003G043100 Sobic001G427800 Sobic001G427800 Sobic001G429400--Sobic001G427800 Sobic009G140700 Sobic009G140700 Sobic001G429400--Sobic009G140700 Sobic002G272600 Sobic002G272600 Sobic001G429400--Sobic002G272600 Sobic004G263900 Sobic004G263900 Sobic001G429400--Sobic004G263900 Sobic010G238700 Sobic010G238700 Sobic001G230900--Sobic010G238700 Sobic009G036900 Sobic009G036900 Sobic001G230900--Sobic009G036900 Sobic010G144400 Sobic010G144400 Sobic001G230900--Sobic010G144400 Sobic002G068300 Sobic002G068300 Sobic001G230900--Sobic002G068300 Sobic001G230900--Sobic003G024800 Sobic008G132800 Sobic008G132800 Sobic001G230900--Sobic008G132800 Sobic010G228600 Sobic010G228600 Sobic001G230900--Sobic010G228600 Sobic001G090000 Sobic001G090000 Sobic001G230900--Sobic001G090000 Sobic001G040300 Sobic001G040300 Sobic001G230900--Sobic001G040300
Octagon: transcription factors


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