Gene annotation
Transcriptome id Sobic.003G321900.1,Sobic.003G321900.2
Synonym Sb03g036850, CLS
Functional annotation CDP-alcohol phosphatidyltransferase, putative, expressed
UniProt C5XMC7
Pfam PF01066
Panther DB PTHR14269
NCBI CDD KOG1617; CDP-alcohol phosphatidyltransferase/Phosphatidylglycerol-phosphate synthase
KEGG Orthology K08744; cardiolipin synthase (CMP-forming)
Gene Ontology GO:0016780; phosphotransferase activity, for other substituted phosphate groups GO:0016020membrane GO:0008654phospholipid biosynthetic process


Orthologs (automatic annotation)
TAIR AT4G04870 : cardiolipin synthase
RAP-DB (Rice) LOC_Os01g57930.1 : CDP-alcohol phosphatidyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a027238
Brachypodium -
Barley HORVU3Hr1G077710.28 , HORVU3Hr1G077710.29 , HORVU3Hr1G077710.22 , HORVU3Hr1G077710.23 , HORVU3Hr1G077710.20 , HORVU3Hr1G077710.21 , HORVU3Hr1G077710.26 , HORVU3Hr1G077710.27 , HORVU3Hr1G077710.24 , HORVU3Hr1G077710.25 , HORVU3Hr1G077710.3 , HORVU3Hr1G077710.2 , HORVU3Hr1G077710.7 , HORVU3Hr1G077710.6 , HORVU3Hr1G077710.5 , HORVU3Hr1G077710.4 , HORVU3Hr1G077710.9 , HORVU3Hr1G077710.8 , HORVU3Hr1G077710.13 , HORVU3Hr1G077710.12 , HORVU3Hr1G077710.11 , HORVU3Hr1G077710.10 , HORVU3Hr1G077710.17 , HORVU3Hr1G077710.16 , HORVU3Hr1G077710.15 , HORVU3Hr1G077710.14 , HORVU3Hr1G077710.19 , HORVU3Hr1G077710.18
Wheat TraesCS3D02G319700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G228500 rab geranylgeranyl transferase like protein, putative, expressed K14050: geranylgeranyl transferase type-2 subunit alpha
2 Sobic.008G009600 double-stranded RNA binding motif containing protein, expressed -
3 Sobic.010G083900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsPOP12 - Putative Prolyl Oligopeptidase homologue, expressed -
4 Sobic.004G211100 RNA binding protein, putative, expressed K11090: LA, lupus La protein
5 Sobic.006G104500 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed K13418: somatic embryogenesis receptor kinase 1
6 Sobic.006G231800 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
7 Sobic.010G176500 expressed protein -
8 Sobic.002G405500 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11841: USP10, ubiquitin carboxyl-terminal hydrolase 10
9 Sobic.004G047200 T-complex protein, putative, expressed K09499: T-complex protein 1 subunit eta
10 Sobic.007G112600 co-chaperone GrpE protein, putative, expressed K03687: molecular chaperone GrpE
11 Sobic.004G002200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
12 Sobic.001G126600 BRCA1 C Terminus domain containing protein, expressed K14843: PES1, pescadillo
13 Sobic.006G125900 elongator complex protein 3, putative, expressed K07739: ELP3, elongator complex protein 3
14 Sobic.007G010900 esterase, putative, expressed -
15 Sobic.001G061800 RFC3 - Putative clamp loader of PCNA, replication factor C subunit 3, expressed K10756: replication factor C subunit 3/5
16 Sobic.002G189400 AMP-binding enzyme, putative, expressed -
17 Sobic.002G308500 peptide-Nasparagine amidase, putative, expressed K01456: E3.5.1.52, NGLY1, peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase
18 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
19 Sobic.009G101200 expressed protein K17973: NAA25, N-terminal acetyltransferase B complex non-catalytic subunit
20 Sobic.003G287100 NADPH reductase, putative, expressed -


Gene co-expression network
sample Sobic003G321900 Sobic003G321900 Sobic010G228500 Sobic010G228500 Sobic003G321900--Sobic010G228500 Sobic008G009600 Sobic008G009600 Sobic003G321900--Sobic008G009600 Sobic010G083900 Sobic010G083900 Sobic003G321900--Sobic010G083900 Sobic004G211100 Sobic004G211100 Sobic003G321900--Sobic004G211100 Sobic006G104500 Sobic006G104500 Sobic003G321900--Sobic006G104500 Sobic006G231800 Sobic006G231800 Sobic003G321900--Sobic006G231800 Sobic010G176500 Sobic010G176500 Sobic003G321900--Sobic010G176500 Sobic002G405500 Sobic002G405500 Sobic003G321900--Sobic002G405500 Sobic004G047200 Sobic004G047200 Sobic003G321900--Sobic004G047200 Sobic002G308500 Sobic002G308500 Sobic010G228500--Sobic002G308500 Sobic004G277200 Sobic004G277200 Sobic010G228500--Sobic004G277200 Sobic008G103300 Sobic008G103300 Sobic010G228500--Sobic008G103300 Sobic010G219000 Sobic010G219000 Sobic010G228500--Sobic010G219000 Sobic008G099800 Sobic008G099800 Sobic010G228500--Sobic008G099800 Sobic002G189400 Sobic002G189400 Sobic010G228500--Sobic002G189400 Sobic004G339100 Sobic004G339100 Sobic010G228500--Sobic004G339100 Sobic010G228500--Sobic002G405500 Sobic007G225100 Sobic007G225100 Sobic010G228500--Sobic007G225100 Sobic006G049600 Sobic006G049600 Sobic008G009600--Sobic006G049600 Sobic004G011000 Sobic004G011000 Sobic008G009600--Sobic004G011000 Sobic001G017700 Sobic001G017700 Sobic008G009600--Sobic001G017700 Sobic001G142100 Sobic001G142100 Sobic008G009600--Sobic001G142100 Sobic010G073200 Sobic010G073200 Sobic008G009600--Sobic010G073200 Sobic003G407600 Sobic003G407600 Sobic008G009600--Sobic003G407600 Sobic001G145400 Sobic001G145400 Sobic008G009600--Sobic001G145400 Sobic009G101200 Sobic009G101200 Sobic008G009600--Sobic009G101200 Sobic006G226300 Sobic006G226300 Sobic008G009600--Sobic006G226300 Sobic002G378100 Sobic002G378100 Sobic010G083900--Sobic002G378100 Sobic001G322600 Sobic001G322600 Sobic010G083900--Sobic001G322600 Sobic001G049800 Sobic001G049800 Sobic010G083900--Sobic001G049800 Sobic001G422500 Sobic001G422500 Sobic010G083900--Sobic001G422500 Sobic010G224700 Sobic010G224700 Sobic010G083900--Sobic010G224700 Sobic004G151000 Sobic004G151000 Sobic010G083900--Sobic004G151000 Sobic003G014700 Sobic003G014700 Sobic010G083900--Sobic003G014700 Sobic005G028300 Sobic005G028300 Sobic010G083900--Sobic005G028300 Sobic001G119600 Sobic001G119600 Sobic010G083900--Sobic001G119600 Sobic001G008200 Sobic001G008200 Sobic004G211100--Sobic001G008200 Sobic002G263700 Sobic002G263700 Sobic004G211100--Sobic002G263700 Sobic004G211100--Sobic001G145400 Sobic006G125900 Sobic006G125900 Sobic004G211100--Sobic006G125900 Sobic002G399200 Sobic002G399200 Sobic004G211100--Sobic002G399200 Sobic004G309900 Sobic004G309900 Sobic004G211100--Sobic004G309900 Sobic004G211100--Sobic008G103300 Sobic006G270600 Sobic006G270600 Sobic004G211100--Sobic006G270600 Sobic001G259000 Sobic001G259000 Sobic004G211100--Sobic001G259000 Sobic006G104500--Sobic003G321900 Sobic002G394800 Sobic002G394800 Sobic006G104500--Sobic002G394800 Sobic007G010900 Sobic007G010900 Sobic006G104500--Sobic007G010900 Sobic006G233300 Sobic006G233300 Sobic006G104500--Sobic006G233300 Sobic006G233000 Sobic006G233000 Sobic006G104500--Sobic006G233000 Sobic003G199200 Sobic003G199200 Sobic006G104500--Sobic003G199200 Sobic001G117300 Sobic001G117300 Sobic006G104500--Sobic001G117300 Sobic007G202600 Sobic007G202600 Sobic006G104500--Sobic007G202600 Sobic004G349175 Sobic004G349175 Sobic006G104500--Sobic004G349175 Sobic006G231800--Sobic001G422500 Sobic009G145101 Sobic009G145101 Sobic006G231800--Sobic009G145101 Sobic006G231800--Sobic002G378100 Sobic006G185200 Sobic006G185200 Sobic006G231800--Sobic006G185200 Sobic009G213200 Sobic009G213200 Sobic006G231800--Sobic009G213200 Sobic006G231800--Sobic006G049600 Sobic006G231800--Sobic001G119600 Sobic010G003400 Sobic010G003400 Sobic006G231800--Sobic010G003400 Sobic002G373950 Sobic002G373950 Sobic006G231800--Sobic002G373950 Sobic001G218800 Sobic001G218800 Sobic010G176500--Sobic001G218800 Sobic007G039400 Sobic007G039400 Sobic010G176500--Sobic007G039400 Sobic001G291800 Sobic001G291800 Sobic010G176500--Sobic001G291800 Sobic002G092300 Sobic002G092300 Sobic010G176500--Sobic002G092300 Sobic002G256200 Sobic002G256200 Sobic010G176500--Sobic002G256200 Sobic010G176500--Sobic008G103300 Sobic001G482900 Sobic001G482900 Sobic010G176500--Sobic001G482900 Sobic003G099300 Sobic003G099300 Sobic010G176500--Sobic003G099300 Sobic010G176500--Sobic006G233300 Sobic006G080400 Sobic006G080400 Sobic002G405500--Sobic006G080400 Sobic007G077900 Sobic007G077900 Sobic002G405500--Sobic007G077900 Sobic002G405500--Sobic010G219000 Sobic007G019300 Sobic007G019300 Sobic002G405500--Sobic007G019300 Sobic004G155600 Sobic004G155600 Sobic002G405500--Sobic004G155600 Sobic004G223300 Sobic004G223300 Sobic002G405500--Sobic004G223300 Sobic001G536000 Sobic001G536000 Sobic002G405500--Sobic001G536000 Sobic002G405500--Sobic010G228500 Sobic001G453000 Sobic001G453000 Sobic002G405500--Sobic001G453000 Sobic004G326600 Sobic004G326600 Sobic004G047200--Sobic004G326600 Sobic002G423500 Sobic002G423500 Sobic004G047200--Sobic002G423500 Sobic002G014400 Sobic002G014400 Sobic004G047200--Sobic002G014400 Sobic001G008500 Sobic001G008500 Sobic004G047200--Sobic001G008500 Sobic005G163700 Sobic005G163700 Sobic004G047200--Sobic005G163700 Sobic001G530800 Sobic001G530800 Sobic004G047200--Sobic001G530800 Sobic004G215700 Sobic004G215700 Sobic004G047200--Sobic004G215700 Sobic001G460500 Sobic001G460500 Sobic004G047200--Sobic001G460500 Sobic001G371100 Sobic001G371100 Sobic004G047200--Sobic001G371100
Octagon: transcription factors


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