Gene annotation
Transcriptome id Sobic.006G104500.1
Synonym Sb06g018760, SERK1, ATSERK1
Functional annotation BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
UniProt C5Y9S6
Pfam PF00560 PF08263 PF00069
Panther DB PTHR27001 PTHR27001:SF224
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K13418; somatic embryogenesis receptor kinase 1
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G71830 : somatic embryogenesis receptor-like kinase 1
RAP-DB (Rice) LOC_Os04g38480.1 : BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a020793 , Zm00025a056190
Brachypodium PNT61220 , KQJ82949 , KQK00013
Barley HORVU2Hr1G080020.6 , HORVU2Hr1G080020.7 , HORVU2Hr1G080020.4 , HORVU2Hr1G080020.2 , HORVU2Hr1G080020.5 , HORVU2Hr1G080020.3 , HORVU2Hr1G080020.8 , HORVU2Hr1G080020.9
Wheat TraesCS2D02G321400 , TraesCS2B02G340700 , TraesCS2A02G343100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G321900 CDP-alcohol phosphatidyltransferase, putative, expressed K08744: cardiolipin synthase (CMP-forming)
2 Sobic.002G394800 SWIB/MDM2 domain containing protein, expressed K11650: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
3 Sobic.007G010900 esterase, putative, expressed -
4 Sobic.006G233300 RNA binding protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
5 Sobic.006G233000 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
6 Sobic.003G199200 aspartic proteinase-like protein 2 precursor, putative, expressed -
7 Sobic.001G117300 expressed protein -
8 Sobic.007G202600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio domain-containing protein PPD1, putative, expressed K17943: pumilio RNA-binding family
9 Sobic.004G349175 - K14509: ETR, ethylene receptor
10 Sobic.008G024800 histidine triad family protein, putative, expressed K01522: bis(5'-adenosyl)-triphosphatase
11 Sobic.010G228500 rab geranylgeranyl transferase like protein, putative, expressed K14050: geranylgeranyl transferase type-2 subunit alpha
12 Sobic.010G004100 expressed protein -
13 Sobic.001G387500 disease resistance RPP13-like protein 1, putative, expressed -
14 Sobic.006G047100 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
15 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -
16 Sobic.010G083900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsPOP12 - Putative Prolyl Oligopeptidase homologue, expressed -
17 Sobic.002G143900 OsFBL19 - F-box domain and LRR containing protein, expressed K10273: F-box and leucine-rich repeat protein 7
18 Sobic.001G023800 expressed protein -
19 Sobic.002G014600 OsFBX285 - F-box domain containing protein, expressed -
20 Sobic.009G105900 amino acid permease family protein, putative, expressed K14427: SLC12A4_6, solute carrier family 12 (potassium/chloride transporter), member 4/6


Gene co-expression network
sample Sobic006G104500 Sobic006G104500 Sobic003G321900 Sobic003G321900 Sobic006G104500--Sobic003G321900 Sobic002G394800 Sobic002G394800 Sobic006G104500--Sobic002G394800 Sobic007G010900 Sobic007G010900 Sobic006G104500--Sobic007G010900 Sobic006G233300 Sobic006G233300 Sobic006G104500--Sobic006G233300 Sobic006G233000 Sobic006G233000 Sobic006G104500--Sobic006G233000 Sobic003G199200 Sobic003G199200 Sobic006G104500--Sobic003G199200 Sobic001G117300 Sobic001G117300 Sobic006G104500--Sobic001G117300 Sobic007G202600 Sobic007G202600 Sobic006G104500--Sobic007G202600 Sobic004G349175 Sobic004G349175 Sobic006G104500--Sobic004G349175 Sobic010G228500 Sobic010G228500 Sobic003G321900--Sobic010G228500 Sobic008G009600 Sobic008G009600 Sobic003G321900--Sobic008G009600 Sobic010G083900 Sobic010G083900 Sobic003G321900--Sobic010G083900 Sobic004G211100 Sobic004G211100 Sobic003G321900--Sobic004G211100 Sobic003G321900--Sobic006G104500 Sobic006G231800 Sobic006G231800 Sobic003G321900--Sobic006G231800 Sobic010G176500 Sobic010G176500 Sobic003G321900--Sobic010G176500 Sobic002G405500 Sobic002G405500 Sobic003G321900--Sobic002G405500 Sobic004G047200 Sobic004G047200 Sobic003G321900--Sobic004G047200 Sobic002G394800--Sobic006G233300 Sobic002G143900 Sobic002G143900 Sobic002G394800--Sobic002G143900 Sobic002G394800--Sobic006G233000 Sobic002G280600 Sobic002G280600 Sobic002G394800--Sobic002G280600 Sobic006G245700 Sobic006G245700 Sobic002G394800--Sobic006G245700 Sobic006G272200 Sobic006G272200 Sobic002G394800--Sobic006G272200 Sobic001G370300 Sobic001G370300 Sobic002G394800--Sobic001G370300 Sobic004G249300 Sobic004G249300 Sobic002G394800--Sobic004G249300 Sobic002G430900 Sobic002G430900 Sobic002G394800--Sobic002G430900 Sobic009G105900 Sobic009G105900 Sobic007G010900--Sobic009G105900 Sobic008G125000 Sobic008G125000 Sobic007G010900--Sobic008G125000 Sobic003G307900 Sobic003G307900 Sobic007G010900--Sobic003G307900 Sobic007G010900--Sobic004G047200 Sobic001G373000 Sobic001G373000 Sobic007G010900--Sobic001G373000 Sobic006G056200 Sobic006G056200 Sobic007G010900--Sobic006G056200 Sobic008G013300 Sobic008G013300 Sobic007G010900--Sobic008G013300 Sobic002G318600 Sobic002G318600 Sobic007G010900--Sobic002G318600 Sobic007G010900--Sobic006G233300 Sobic006G010000 Sobic006G010000 Sobic006G233300--Sobic006G010000 Sobic006G233300--Sobic002G143900 Sobic006G233300--Sobic006G233000 Sobic003G158700 Sobic003G158700 Sobic006G233300--Sobic003G158700 Sobic006G233300--Sobic002G394800 Sobic003G099300 Sobic003G099300 Sobic006G233300--Sobic003G099300 Sobic010G239800 Sobic010G239800 Sobic006G233300--Sobic010G239800 Sobic010G247400 Sobic010G247400 Sobic006G233300--Sobic010G247400 Sobic006G233300--Sobic002G280600 Sobic006G233000--Sobic006G010000 Sobic010G085200 Sobic010G085200 Sobic006G233000--Sobic010G085200 Sobic006G233000--Sobic006G233300 Sobic004G155600 Sobic004G155600 Sobic006G233000--Sobic004G155600 Sobic001G259000 Sobic001G259000 Sobic006G233000--Sobic001G259000 Sobic006G233000--Sobic002G394800 Sobic003G439800 Sobic003G439800 Sobic006G233000--Sobic003G439800 Sobic006G270600 Sobic006G270600 Sobic006G233000--Sobic006G270600 Sobic007G134100 Sobic007G134100 Sobic006G233000--Sobic007G134100 Sobic001G393700 Sobic001G393700 Sobic003G199200--Sobic001G393700 Sobic003G389300 Sobic003G389300 Sobic003G199200--Sobic003G389300 Sobic003G199200--Sobic006G056200 Sobic010G017800 Sobic010G017800 Sobic003G199200--Sobic010G017800 Sobic002G327000 Sobic002G327000 Sobic003G199200--Sobic002G327000 Sobic002G137400 Sobic002G137400 Sobic003G199200--Sobic002G137400 Sobic001G163400 Sobic001G163400 Sobic003G199200--Sobic001G163400 Sobic003G227100 Sobic003G227100 Sobic003G199200--Sobic003G227100 Sobic003G240700 Sobic003G240700 Sobic003G199200--Sobic003G240700 Sobic002G418700 Sobic002G418700 Sobic001G117300--Sobic002G418700 Sobic001G323000 Sobic001G323000 Sobic001G117300--Sobic001G323000 Sobic006G194500 Sobic006G194500 Sobic001G117300--Sobic006G194500 Sobic006G249700 Sobic006G249700 Sobic001G117300--Sobic006G249700 Sobic001G466700 Sobic001G466700 Sobic001G117300--Sobic001G466700 Sobic001G143500 Sobic001G143500 Sobic001G117300--Sobic001G143500 Sobic009G138100 Sobic009G138100 Sobic001G117300--Sobic009G138100 Sobic006G217700 Sobic006G217700 Sobic001G117300--Sobic006G217700 Sobic007G162800 Sobic007G162800 Sobic001G117300--Sobic007G162800 Sobic010G083000 Sobic010G083000 Sobic007G202600--Sobic010G083000 Sobic007G041500 Sobic007G041500 Sobic007G202600--Sobic007G041500 Sobic002G189400 Sobic002G189400 Sobic007G202600--Sobic002G189400 Sobic004G330900 Sobic004G330900 Sobic007G202600--Sobic004G330900 Sobic004G282400 Sobic004G282400 Sobic007G202600--Sobic004G282400 Sobic010G188400 Sobic010G188400 Sobic007G202600--Sobic010G188400 Sobic002G152200 Sobic002G152200 Sobic007G202600--Sobic002G152200 Sobic009G193300 Sobic009G193300 Sobic007G202600--Sobic009G193300 Sobic006G114500 Sobic006G114500 Sobic007G202600--Sobic006G114500 Sobic001G040300 Sobic001G040300 Sobic004G349175--Sobic001G040300 Sobic004G173500 Sobic004G173500 Sobic004G349175--Sobic004G173500 Sobic001G543300 Sobic001G543300 Sobic004G349175--Sobic001G543300 Sobic010G029400 Sobic010G029400 Sobic004G349175--Sobic010G029400 Sobic008G132800 Sobic008G132800 Sobic004G349175--Sobic008G132800 Sobic006G056600 Sobic006G056600 Sobic004G349175--Sobic006G056600 Sobic002G050200 Sobic002G050200 Sobic004G349175--Sobic002G050200 Sobic006G098500 Sobic006G098500 Sobic004G349175--Sobic006G098500 Sobic006G242300 Sobic006G242300 Sobic004G349175--Sobic006G242300
Octagon: transcription factors


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