Gene annotation
Transcriptome id Sobic.008G024800.1
Synonym Sb08g002160, FHIT
Functional annotation histidine triad family protein, putative, expressed
UniProt Q84YD8 , A0A1B6PB01
Pfam PF01230
Panther DB PTHR23089 PTHR23089:SF19
NCBI CDD KOG3379; Diadenosine polyphosphate hydrolase and related proteins of the histidine triad (HIT) family
KEGG Orthology K01522; bis(5'-adenosyl)-triphosphatase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G58240 : FRAGILE HISTIDINE TRIAD
RAP-DB (Rice) LOC_Os12g02730.1 : histidine triad family protein, putative, expressed
MaizeGDB (Corn) Zm00025a040753
Brachypodium PNT65546
Barley HORVU5Hr1G046170.11 , HORVU5Hr1G046170.10 , HORVU5Hr1G046170.9 , HORVU5Hr1G046170.8 , HORVU5Hr1G046170.5 , HORVU5Hr1G046170.4 , HORVU5Hr1G046170.7 , HORVU5Hr1G046170.6 , HORVU5Hr1G046170.1 , HORVU5Hr1G046170.3 , HORVU5Hr1G046170.2
Wheat TraesCS5D02G147300 , TraesCS4A02G191700 , TraesCS5B02G143800 , TraesCS4B02G123600 , TraesCS5A02G145100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G046300 ubiquitin carboxyl-terminal hydrolase 14, putative, expressed K11836: USP5_13, ubiquitin carboxyl-terminal hydrolase 5/13
2 Sobic.010G176500 expressed protein -
3 Sobic.010G228500 rab geranylgeranyl transferase like protein, putative, expressed K14050: geranylgeranyl transferase type-2 subunit alpha
4 Sobic.006G188500 uncharacterized mscS family protein, putative, expressed -
5 Sobic.001G456800 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
6 Sobic.010G266500 BRE, putative, expressed K12173: BRE, BRCA1-A complex subunit BRE
7 Sobic.006G010000 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
8 Sobic.005G172500 WD repeat-containing protein, putative, expressed K08266: MLST8, target of rapamycin complex subunit LST8
9 Sobic.001G244300 GA19388-PA, putative, expressed K10768: alkylated DNA repair protein alkB homolog 6
10 Sobic.009G243100 pex14, putative, expressed -
11 Sobic.008G017200 WD domain, G-beta repeat domain containing protein, expressed K14320: aladin
12 Sobic.001G023800 expressed protein -
13 Sobic.006G233300 RNA binding protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
14 Sobic.006G268600 SAR DNA-binding protein-like, putative, expressed -
15 Sobic.006G148100 DUF647 domain containing protein, putative, expressed -
16 Sobic.006G233000 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
17 Sobic.008G032200 expressed protein -
18 Sobic.009G234700 protein of unknown function DUF1296 domain containing protein, expressed -
19 Sobic.007G200900 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
20 Sobic.002G405500 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11841: USP10, ubiquitin carboxyl-terminal hydrolase 10


Gene co-expression network
sample Sobic008G024800 Sobic008G024800 Sobic003G046300 Sobic003G046300 Sobic008G024800--Sobic003G046300 Sobic010G176500 Sobic010G176500 Sobic008G024800--Sobic010G176500 Sobic010G228500 Sobic010G228500 Sobic008G024800--Sobic010G228500 Sobic006G188500 Sobic006G188500 Sobic008G024800--Sobic006G188500 Sobic001G456800 Sobic001G456800 Sobic008G024800--Sobic001G456800 Sobic010G266500 Sobic010G266500 Sobic008G024800--Sobic010G266500 Sobic006G010000 Sobic006G010000 Sobic008G024800--Sobic006G010000 Sobic005G172500 Sobic005G172500 Sobic008G024800--Sobic005G172500 Sobic001G244300 Sobic001G244300 Sobic008G024800--Sobic001G244300 Sobic003G046300--Sobic006G188500 Sobic008G103300 Sobic008G103300 Sobic003G046300--Sobic008G103300 Sobic002G142900 Sobic002G142900 Sobic003G046300--Sobic002G142900 Sobic002G371700 Sobic002G371700 Sobic003G046300--Sobic002G371700 Sobic003G132000 Sobic003G132000 Sobic003G046300--Sobic003G132000 Sobic007G000200 Sobic007G000200 Sobic003G046300--Sobic007G000200 Sobic002G263600 Sobic002G263600 Sobic003G046300--Sobic002G263600 Sobic001G455800 Sobic001G455800 Sobic003G046300--Sobic001G455800 Sobic001G487100 Sobic001G487100 Sobic003G046300--Sobic001G487100 Sobic001G218800 Sobic001G218800 Sobic010G176500--Sobic001G218800 Sobic007G039400 Sobic007G039400 Sobic010G176500--Sobic007G039400 Sobic001G291800 Sobic001G291800 Sobic010G176500--Sobic001G291800 Sobic002G092300 Sobic002G092300 Sobic010G176500--Sobic002G092300 Sobic002G256200 Sobic002G256200 Sobic010G176500--Sobic002G256200 Sobic010G176500--Sobic008G103300 Sobic001G482900 Sobic001G482900 Sobic010G176500--Sobic001G482900 Sobic003G099300 Sobic003G099300 Sobic010G176500--Sobic003G099300 Sobic006G233300 Sobic006G233300 Sobic010G176500--Sobic006G233300 Sobic002G308500 Sobic002G308500 Sobic010G228500--Sobic002G308500 Sobic004G277200 Sobic004G277200 Sobic010G228500--Sobic004G277200 Sobic010G228500--Sobic008G103300 Sobic010G219000 Sobic010G219000 Sobic010G228500--Sobic010G219000 Sobic008G099800 Sobic008G099800 Sobic010G228500--Sobic008G099800 Sobic002G189400 Sobic002G189400 Sobic010G228500--Sobic002G189400 Sobic004G339100 Sobic004G339100 Sobic010G228500--Sobic004G339100 Sobic002G405500 Sobic002G405500 Sobic010G228500--Sobic002G405500 Sobic007G225100 Sobic007G225100 Sobic010G228500--Sobic007G225100 Sobic006G188500--Sobic003G046300 Sobic006G188500--Sobic007G000200 Sobic009G003700 Sobic009G003700 Sobic006G188500--Sobic009G003700 Sobic009G234700 Sobic009G234700 Sobic006G188500--Sobic009G234700 Sobic001G488100 Sobic001G488100 Sobic006G188500--Sobic001G488100 Sobic006G188500--Sobic001G487100 Sobic005G175000 Sobic005G175000 Sobic006G188500--Sobic005G175000 Sobic004G006600 Sobic004G006600 Sobic006G188500--Sobic004G006600 Sobic001G462600 Sobic001G462600 Sobic006G188500--Sobic001G462600 Sobic001G456800--Sobic003G046300 Sobic001G456800--Sobic005G175000 Sobic001G456800--Sobic006G188500 Sobic001G456800--Sobic008G024800 Sobic008G118500 Sobic008G118500 Sobic001G456800--Sobic008G118500 Sobic001G469200 Sobic001G469200 Sobic001G456800--Sobic001G469200 Sobic002G199400 Sobic002G199400 Sobic001G456800--Sobic002G199400 Sobic006G087100 Sobic006G087100 Sobic001G456800--Sobic006G087100 Sobic008G017200 Sobic008G017200 Sobic001G456800--Sobic008G017200 Sobic008G164600 Sobic008G164600 Sobic010G266500--Sobic008G164600 Sobic007G187600 Sobic007G187600 Sobic010G266500--Sobic007G187600 Sobic001G023800 Sobic001G023800 Sobic010G266500--Sobic001G023800 Sobic001G461400 Sobic001G461400 Sobic010G266500--Sobic001G461400 Sobic010G266500--Sobic002G371700 Sobic003G416700 Sobic003G416700 Sobic010G266500--Sobic003G416700 Sobic002G145800 Sobic002G145800 Sobic010G266500--Sobic002G145800 Sobic004G155600 Sobic004G155600 Sobic010G266500--Sobic004G155600 Sobic010G118000 Sobic010G118000 Sobic010G266500--Sobic010G118000 Sobic006G010000--Sobic006G233300 Sobic006G233000 Sobic006G233000 Sobic006G010000--Sobic006G233000 Sobic008G153500 Sobic008G153500 Sobic006G010000--Sobic008G153500 Sobic003G293300 Sobic003G293300 Sobic006G010000--Sobic003G293300 Sobic010G186600 Sobic010G186600 Sobic006G010000--Sobic010G186600 Sobic001G114500 Sobic001G114500 Sobic006G010000--Sobic001G114500 Sobic001G259000 Sobic001G259000 Sobic006G010000--Sobic001G259000 Sobic001G234200 Sobic001G234200 Sobic006G010000--Sobic001G234200 Sobic002G071000 Sobic002G071000 Sobic006G010000--Sobic002G071000 Sobic004G131300 Sobic004G131300 Sobic005G172500--Sobic004G131300 Sobic006G148100 Sobic006G148100 Sobic005G172500--Sobic006G148100 Sobic009G056200 Sobic009G056200 Sobic005G172500--Sobic009G056200 Sobic001G493200 Sobic001G493200 Sobic005G172500--Sobic001G493200 Sobic001G227400 Sobic001G227400 Sobic005G172500--Sobic001G227400 Sobic002G371300 Sobic002G371300 Sobic005G172500--Sobic002G371300 Sobic005G172500--Sobic002G142900 Sobic003G408600 Sobic003G408600 Sobic005G172500--Sobic003G408600 Sobic004G257100 Sobic004G257100 Sobic005G172500--Sobic004G257100 Sobic001G120500 Sobic001G120500 Sobic001G244300--Sobic001G120500 Sobic008G063300 Sobic008G063300 Sobic001G244300--Sobic008G063300 Sobic001G407700 Sobic001G407700 Sobic001G244300--Sobic001G407700 Sobic001G244300--Sobic005G172500 Sobic001G244300--Sobic009G056200 Sobic007G102700 Sobic007G102700 Sobic001G244300--Sobic007G102700 Sobic001G058200 Sobic001G058200 Sobic001G244300--Sobic001G058200 Sobic004G156800 Sobic004G156800 Sobic001G244300--Sobic004G156800 Sobic001G401500 Sobic001G401500 Sobic001G244300--Sobic001G401500
Octagon: transcription factors


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