Gene annotation
Transcriptome id Sobic.008G032200.2,Sobic.008G032200.3
Synonym Sb08g002760
Functional annotation expressed protein
UniProt A0A1Z5R4L9 , A0A1Z5R4H7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51650 : -
RAP-DB (Rice) LOC_Os12g02130.1 : expressed protein
MaizeGDB (Corn) Zm00025a029023 , Zm00025a053839 , Zm00025a033297
Brachypodium KQJ89428 , KQJ89427
Barley HORVU4Hr1G022540.3 , HORVU4Hr1G022540.2 , HORVU4Hr1G022540.1 , HORVU4Hr1G022540.7 , HORVU4Hr1G022540.6 , HORVU4Hr1G022540.5 , HORVU4Hr1G022540.4
Wheat TraesCS4A02G195400 , TraesCS4A02G195400 , TraesCS4A02G195300 , TraesCS4A02G195300 , TraesCS4B02G120100 , TraesCS4B02G120100 , TraesCS4B02G120000 , TraesCS4B02G120000 , TraesCS4D02G118200 , TraesCS4D02G118200 , TraesCS4D02G118100 , TraesCS4D02G118100 , TraesCS4D02G118100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G266500 BRE, putative, expressed K12173: BRE, BRCA1-A complex subunit BRE
2 Sobic.005G172500 WD repeat-containing protein, putative, expressed K08266: MLST8, target of rapamycin complex subunit LST8
3 Sobic.003G214600 transcriptional corepressor LEUNIG, putative, expressed -
4 Sobic.001G008200 expressed protein K13211: GC-rich sequence DNA-binding factor
5 Sobic.010G176500 expressed protein -
6 Sobic.002G142900 immunoglobulin/major histocompatibility complex, putative, expressed K12607: CCR4-NOT transcription complex subunit 10
7 Sobic.003G046300 ubiquitin carboxyl-terminal hydrolase 14, putative, expressed K11836: USP5_13, ubiquitin carboxyl-terminal hydrolase 5/13
8 Sobic.005G133800 NEF1, putative, expressed -
9 Sobic.003G310900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
10 Sobic.001G426100 enolase, putative, expressed K01689: ENO, enolase
11 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
12 Sobic.001G291800 eukaryotic translation initiation factor 3 subunit B, putative, expressed K03253: translation initiation factor 3 subunit B
13 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
14 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1
15 Sobic.001G058200 PPR repeat domain containing protein, putative, expressed -
16 Sobic.003G062300 NF-X1-type zinc finger protein, putative, expressed K15683: NFXL1, NF-X1-type zinc finger protein NFXL1
17 Sobic.004G237400 cullin, putative, expressed K03869: cullin 3
18 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
19 Sobic.002G029100 GYF domain containing protein, putative, expressed -
20 Sobic.001G455800 methionyl-tRNA synthetase, putative, expressed K01874: MARS, methionyl-tRNA synthetase


Gene co-expression network
sample Sobic008G032200 Sobic008G032200 Sobic010G266500 Sobic010G266500 Sobic008G032200--Sobic010G266500 Sobic005G172500 Sobic005G172500 Sobic008G032200--Sobic005G172500 Sobic003G214600 Sobic003G214600 Sobic008G032200--Sobic003G214600 Sobic001G008200 Sobic001G008200 Sobic008G032200--Sobic001G008200 Sobic010G176500 Sobic010G176500 Sobic008G032200--Sobic010G176500 Sobic002G142900 Sobic002G142900 Sobic008G032200--Sobic002G142900 Sobic003G046300 Sobic003G046300 Sobic008G032200--Sobic003G046300 Sobic005G133800 Sobic005G133800 Sobic008G032200--Sobic005G133800 Sobic003G310900 Sobic003G310900 Sobic008G032200--Sobic003G310900 Sobic008G164600 Sobic008G164600 Sobic010G266500--Sobic008G164600 Sobic007G187600 Sobic007G187600 Sobic010G266500--Sobic007G187600 Sobic001G023800 Sobic001G023800 Sobic010G266500--Sobic001G023800 Sobic001G461400 Sobic001G461400 Sobic010G266500--Sobic001G461400 Sobic002G371700 Sobic002G371700 Sobic010G266500--Sobic002G371700 Sobic003G416700 Sobic003G416700 Sobic010G266500--Sobic003G416700 Sobic002G145800 Sobic002G145800 Sobic010G266500--Sobic002G145800 Sobic004G155600 Sobic004G155600 Sobic010G266500--Sobic004G155600 Sobic010G118000 Sobic010G118000 Sobic010G266500--Sobic010G118000 Sobic004G131300 Sobic004G131300 Sobic005G172500--Sobic004G131300 Sobic006G148100 Sobic006G148100 Sobic005G172500--Sobic006G148100 Sobic009G056200 Sobic009G056200 Sobic005G172500--Sobic009G056200 Sobic001G493200 Sobic001G493200 Sobic005G172500--Sobic001G493200 Sobic001G227400 Sobic001G227400 Sobic005G172500--Sobic001G227400 Sobic002G371300 Sobic002G371300 Sobic005G172500--Sobic002G371300 Sobic005G172500--Sobic002G142900 Sobic003G408600 Sobic003G408600 Sobic005G172500--Sobic003G408600 Sobic004G257100 Sobic004G257100 Sobic005G172500--Sobic004G257100 Sobic005G200800 Sobic005G200800 Sobic003G214600--Sobic005G200800 Sobic002G029100 Sobic002G029100 Sobic003G214600--Sobic002G029100 Sobic006G088200 Sobic006G088200 Sobic003G214600--Sobic006G088200 Sobic003G214600--Sobic003G408600 Sobic009G255600 Sobic009G255600 Sobic003G214600--Sobic009G255600 Sobic005G008800 Sobic005G008800 Sobic003G214600--Sobic005G008800 Sobic007G183300 Sobic007G183300 Sobic003G214600--Sobic007G183300 Sobic007G163100 Sobic007G163100 Sobic003G214600--Sobic007G163100 Sobic003G360400 Sobic003G360400 Sobic003G214600--Sobic003G360400 Sobic004G309900 Sobic004G309900 Sobic001G008200--Sobic004G309900 Sobic001G008200--Sobic005G172500 Sobic001G008200--Sobic001G227400 Sobic001G008200--Sobic001G493200 Sobic003G133900 Sobic003G133900 Sobic001G008200--Sobic003G133900 Sobic006G240100 Sobic006G240100 Sobic001G008200--Sobic006G240100 Sobic001G008200--Sobic004G155600 Sobic001G473600 Sobic001G473600 Sobic001G008200--Sobic001G473600 Sobic001G145400 Sobic001G145400 Sobic001G008200--Sobic001G145400 Sobic001G218800 Sobic001G218800 Sobic010G176500--Sobic001G218800 Sobic007G039400 Sobic007G039400 Sobic010G176500--Sobic007G039400 Sobic001G291800 Sobic001G291800 Sobic010G176500--Sobic001G291800 Sobic002G092300 Sobic002G092300 Sobic010G176500--Sobic002G092300 Sobic002G256200 Sobic002G256200 Sobic010G176500--Sobic002G256200 Sobic008G103300 Sobic008G103300 Sobic010G176500--Sobic008G103300 Sobic001G482900 Sobic001G482900 Sobic010G176500--Sobic001G482900 Sobic003G099300 Sobic003G099300 Sobic010G176500--Sobic003G099300 Sobic006G233300 Sobic006G233300 Sobic010G176500--Sobic006G233300 Sobic002G142900--Sobic004G131300 Sobic001G263600 Sobic001G263600 Sobic002G142900--Sobic001G263600 Sobic002G133300 Sobic002G133300 Sobic002G142900--Sobic002G133300 Sobic003G195000 Sobic003G195000 Sobic002G142900--Sobic003G195000 Sobic007G054800 Sobic007G054800 Sobic002G142900--Sobic007G054800 Sobic005G162500 Sobic005G162500 Sobic002G142900--Sobic005G162500 Sobic003G104000 Sobic003G104000 Sobic002G142900--Sobic003G104000 Sobic002G256700 Sobic002G256700 Sobic002G142900--Sobic002G256700 Sobic002G335600 Sobic002G335600 Sobic002G142900--Sobic002G335600 Sobic006G188500 Sobic006G188500 Sobic003G046300--Sobic006G188500 Sobic003G046300--Sobic008G103300 Sobic003G046300--Sobic002G142900 Sobic003G046300--Sobic002G371700 Sobic003G132000 Sobic003G132000 Sobic003G046300--Sobic003G132000 Sobic007G000200 Sobic007G000200 Sobic003G046300--Sobic007G000200 Sobic002G263600 Sobic002G263600 Sobic003G046300--Sobic002G263600 Sobic001G455800 Sobic001G455800 Sobic003G046300--Sobic001G455800 Sobic001G487100 Sobic001G487100 Sobic003G046300--Sobic001G487100 Sobic006G166200 Sobic006G166200 Sobic005G133800--Sobic006G166200 Sobic004G053500 Sobic004G053500 Sobic005G133800--Sobic004G053500 Sobic002G430300 Sobic002G430300 Sobic005G133800--Sobic002G430300 Sobic006G224800 Sobic006G224800 Sobic005G133800--Sobic006G224800 Sobic005G110499 Sobic005G110499 Sobic005G133800--Sobic005G110499 Sobic003G405500 Sobic003G405500 Sobic005G133800--Sobic003G405500 Sobic004G256500 Sobic004G256500 Sobic005G133800--Sobic004G256500 Sobic003G062300 Sobic003G062300 Sobic005G133800--Sobic003G062300 Sobic001G058200 Sobic001G058200 Sobic005G133800--Sobic001G058200 Sobic001G219900 Sobic001G219900 Sobic003G310900--Sobic001G219900 Sobic003G310900--Sobic003G214600 Sobic001G191700 Sobic001G191700 Sobic003G310900--Sobic001G191700 Sobic004G085000 Sobic004G085000 Sobic003G310900--Sobic004G085000 Sobic003G310900--Sobic001G145400 Sobic001G429600 Sobic001G429600 Sobic003G310900--Sobic001G429600 Sobic003G310900--Sobic002G430300 Sobic003G152400 Sobic003G152400 Sobic003G310900--Sobic003G152400 Sobic001G052400 Sobic001G052400 Sobic003G310900--Sobic001G052400
Octagon: transcription factors


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