Gene annotation
Transcriptome id Sobic.003G332100.1
Synonym HIT3, HINT1, Sb03g037730
Functional annotation histidine triad family protein, putative, expressed
UniProt C5XN54
Pfam PF01230
Panther DB PTHR23089 PTHR23089:SF12
NCBI CDD KOG3275; Zinc-binding protein of the histidine triad (HIT) family
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G56490 : HIS triad family protein 3
RAP-DB (Rice) LOC_Os01g59750.1 : histidine triad family protein, putative, expressed
MaizeGDB (Corn) Zm00025a027126
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G130500 1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed K01814: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
2 Sobic.006G073200 OTU-like cysteine protease family protein, putative, expressed K12655: OTUD5, OTU domain-containing protein 5
3 Sobic.004G268100 ornithine carbamoyltransferase, putative, expressed K00611: OTC, argF, ornithine carbamoyltransferase
4 Sobic.004G156800 RNA pseudouridine synthase, putative, expressed -
5 Sobic.008G024800 histidine triad family protein, putative, expressed K01522: bis(5'-adenosyl)-triphosphatase
6 Sobic.009G029700 aminotransferase, putative, expressed K00818: E2.6.1.11, acetylornithine aminotransferase
7 Sobic.008G185500 zinc finger, putative, expressed -
8 Sobic.010G086500 cellulase, putative, expressed -
9 Sobic.010G176500 expressed protein -
10 Sobic.001G361300 CDPK - calcium/calmodulin dependent serine/threonine protein kinase 1(PubMedID : 31721651)@CAMK_CAMK_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
11 Sobic.006G166200 Alg9-like mannosyltransferase protein, putative, expressed K03847: alpha-1,6-mannosyltransferase
12 Sobic.001G456800 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
13 Sobic.009G045900 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
14 Sobic.001G543700 palmitoyl-protein thioesterase 1 precursor, putative, expressed K01074: palmitoyl-protein thioesterase
15 Sobic.009G070950 - -
16 Sobic.003G074200 actin, putative, expressed K11672: ACTR5, ARP5, actin-related protein 5
17 Sobic.004G340400 translation initiation factor eIF-2B subunit epsilon, putative, expressed K03240: translation initiation factor eIF-2B subunit epsilon
18 Sobic.006G082500 co-chaperone GrpE protein, putative, expressed -
19 Sobic.010G118000 PHD-finger family protein, expressed K17586: PHD and RING finger domain-containing protein 1
20 Sobic.001G241300 expressed protein -


Gene co-expression network
sample Sobic003G332100 Sobic003G332100 Sobic009G130500 Sobic009G130500 Sobic003G332100--Sobic009G130500 Sobic006G073200 Sobic006G073200 Sobic003G332100--Sobic006G073200 Sobic004G268100 Sobic004G268100 Sobic003G332100--Sobic004G268100 Sobic004G156800 Sobic004G156800 Sobic003G332100--Sobic004G156800 Sobic008G024800 Sobic008G024800 Sobic003G332100--Sobic008G024800 Sobic009G029700 Sobic009G029700 Sobic003G332100--Sobic009G029700 Sobic008G185500 Sobic008G185500 Sobic003G332100--Sobic008G185500 Sobic010G086500 Sobic010G086500 Sobic003G332100--Sobic010G086500 Sobic010G176500 Sobic010G176500 Sobic003G332100--Sobic010G176500 Sobic006G193300 Sobic006G193300 Sobic009G130500--Sobic006G193300 Sobic006G275800 Sobic006G275800 Sobic009G130500--Sobic006G275800 Sobic009G130500--Sobic003G332100 Sobic004G126000 Sobic004G126000 Sobic009G130500--Sobic004G126000 Sobic009G045900 Sobic009G045900 Sobic009G130500--Sobic009G045900 Sobic002G317100 Sobic002G317100 Sobic009G130500--Sobic002G317100 Sobic001G178400 Sobic001G178400 Sobic009G130500--Sobic001G178400 Sobic004G340400 Sobic004G340400 Sobic009G130500--Sobic004G340400 Sobic010G081700 Sobic010G081700 Sobic009G130500--Sobic010G081700 Sobic008G157200 Sobic008G157200 Sobic006G073200--Sobic008G157200 Sobic004G257100 Sobic004G257100 Sobic006G073200--Sobic004G257100 Sobic001G431000 Sobic001G431000 Sobic006G073200--Sobic001G431000 Sobic001G537500 Sobic001G537500 Sobic006G073200--Sobic001G537500 Sobic001G493200 Sobic001G493200 Sobic006G073200--Sobic001G493200 Sobic008G135200 Sobic008G135200 Sobic006G073200--Sobic008G135200 Sobic006G036100 Sobic006G036100 Sobic006G073200--Sobic006G036100 Sobic004G131300 Sobic004G131300 Sobic006G073200--Sobic004G131300 Sobic001G251100 Sobic001G251100 Sobic006G073200--Sobic001G251100 Sobic004G268100--Sobic009G029700 Sobic002G332400 Sobic002G332400 Sobic004G268100--Sobic002G332400 Sobic009G124000 Sobic009G124000 Sobic004G268100--Sobic009G124000 Sobic002G238000 Sobic002G238000 Sobic004G268100--Sobic002G238000 Sobic001G437200 Sobic001G437200 Sobic004G268100--Sobic001G437200 Sobic003G310100 Sobic003G310100 Sobic004G268100--Sobic003G310100 Sobic006G170200 Sobic006G170200 Sobic004G268100--Sobic006G170200 Sobic004G214400 Sobic004G214400 Sobic004G268100--Sobic004G214400 Sobic001G375000 Sobic001G375000 Sobic004G268100--Sobic001G375000 Sobic007G102700 Sobic007G102700 Sobic004G156800--Sobic007G102700 Sobic010G237900 Sobic010G237900 Sobic004G156800--Sobic010G237900 Sobic001G259000 Sobic001G259000 Sobic004G156800--Sobic001G259000 Sobic001G527300 Sobic001G527300 Sobic004G156800--Sobic001G527300 Sobic004G129300 Sobic004G129300 Sobic004G156800--Sobic004G129300 Sobic001G114500 Sobic001G114500 Sobic004G156800--Sobic001G114500 Sobic009G164000 Sobic009G164000 Sobic004G156800--Sobic009G164000 Sobic010G007100 Sobic010G007100 Sobic004G156800--Sobic010G007100 Sobic006G204800 Sobic006G204800 Sobic004G156800--Sobic006G204800 Sobic003G046300 Sobic003G046300 Sobic008G024800--Sobic003G046300 Sobic008G024800--Sobic010G176500 Sobic010G228500 Sobic010G228500 Sobic008G024800--Sobic010G228500 Sobic006G188500 Sobic006G188500 Sobic008G024800--Sobic006G188500 Sobic001G456800 Sobic001G456800 Sobic008G024800--Sobic001G456800 Sobic010G266500 Sobic010G266500 Sobic008G024800--Sobic010G266500 Sobic006G010000 Sobic006G010000 Sobic008G024800--Sobic006G010000 Sobic005G172500 Sobic005G172500 Sobic008G024800--Sobic005G172500 Sobic001G244300 Sobic001G244300 Sobic008G024800--Sobic001G244300 Sobic001G380500 Sobic001G380500 Sobic009G029700--Sobic001G380500 Sobic009G029700--Sobic004G268100 Sobic007G029100 Sobic007G029100 Sobic009G029700--Sobic007G029100 Sobic004G117800 Sobic004G117800 Sobic009G029700--Sobic004G117800 Sobic009G029700--Sobic001G437200 Sobic002G039000 Sobic002G039000 Sobic009G029700--Sobic002G039000 Sobic009G029700--Sobic003G310100 Sobic002G281800 Sobic002G281800 Sobic009G029700--Sobic002G281800 Sobic001G202500 Sobic001G202500 Sobic009G029700--Sobic001G202500 Sobic002G295500 Sobic002G295500 Sobic008G185500--Sobic002G295500 Sobic007G180600 Sobic007G180600 Sobic008G185500--Sobic007G180600 Sobic008G185500--Sobic001G431000 Sobic008G053600 Sobic008G053600 Sobic008G185500--Sobic008G053600 Sobic001G273700 Sobic001G273700 Sobic008G185500--Sobic001G273700 Sobic007G132100 Sobic007G132100 Sobic008G185500--Sobic007G132100 Sobic002G303600 Sobic002G303600 Sobic008G185500--Sobic002G303600 Sobic007G218000 Sobic007G218000 Sobic008G185500--Sobic007G218000 Sobic004G323700 Sobic004G323700 Sobic008G185500--Sobic004G323700 Sobic010G086500--Sobic006G036100 Sobic001G540800 Sobic001G540800 Sobic010G086500--Sobic001G540800 Sobic001G023000 Sobic001G023000 Sobic010G086500--Sobic001G023000 Sobic010G086500--Sobic004G156800 Sobic001G355200 Sobic001G355200 Sobic010G086500--Sobic001G355200 Sobic002G145800 Sobic002G145800 Sobic010G086500--Sobic002G145800 Sobic005G167700 Sobic005G167700 Sobic010G086500--Sobic005G167700 Sobic010G086500--Sobic006G073200 Sobic010G118000 Sobic010G118000 Sobic010G086500--Sobic010G118000 Sobic001G218800 Sobic001G218800 Sobic010G176500--Sobic001G218800 Sobic007G039400 Sobic007G039400 Sobic010G176500--Sobic007G039400 Sobic001G291800 Sobic001G291800 Sobic010G176500--Sobic001G291800 Sobic002G092300 Sobic002G092300 Sobic010G176500--Sobic002G092300 Sobic002G256200 Sobic002G256200 Sobic010G176500--Sobic002G256200 Sobic008G103300 Sobic008G103300 Sobic010G176500--Sobic008G103300 Sobic001G482900 Sobic001G482900 Sobic010G176500--Sobic001G482900 Sobic003G099300 Sobic003G099300 Sobic010G176500--Sobic003G099300 Sobic006G233300 Sobic006G233300 Sobic010G176500--Sobic006G233300
Octagon: transcription factors


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