Gene annotation
Transcriptome id Sobic.003G351701.1
Synonym -
Functional annotation -
UniProt A0A1W0W0E9
Pfam PF01417
Panther DB PTHR12276 PTHR12276:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46540 : ENTH/VHS family protein
RAP-DB (Rice) LOC_Os01g62370.1 : ENTH domain containing protein, expressed
MaizeGDB (Corn) Zm00025a039684 , Zm00025a026916
Brachypodium KQK10515
Barley HORVU3Hr1G086380.1 , HORVU3Hr1G086380.2 , HORVU3Hr1G086380.3 , HORVU3Hr1G086380.4 , HORVU3Hr1G086380.5 , HORVU3Hr1G086380.6 , HORVU3Hr1G086380.7 , HORVU3Hr1G086380.8 , HORVU3Hr1G086380.9 , HORVU3Hr1G086380.10 , HORVU3Hr1G086380.11
Wheat TraesCS3D02G353100 , TraesCS3A02G358800 , TraesCS3B02G391600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G233100 expressed protein -
2 Sobic.005G168800 DJ-1 family protein, putative, expressed K18881: D-lactate dehydratase
3 Sobic.004G269700 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K04708: 3-dehydrosphinganine reductase
4 Sobic.007G165400 DNA binding protein, putative, expressed -
5 Sobic.007G186100 protein kinase, putative, expressed K13436: pto-interacting protein 1
6 Sobic.002G318100 expressed protein -
7 Sobic.009G130100 CHIT17 - Chitinase family protein precursor, expressed K01183: chitinase
8 Sobic.005G142101 - K19042: E3 ubiquitin-protein ligase BOI and related proteins
9 Sobic.007G115100 hydrolase, NUDIX family, domain containing protein, expressed -
10 Sobic.001G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bHelix-loop-helix transcription factor, putative, expressed -
11 Sobic.001G353300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
12 Sobic.008G112600 guanylate kinase, putative, expressed K00942: E2.7.4.8, guanylate kinase
13 Sobic.003G343900 expressed protein -
14 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -
15 Sobic.004G001000 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
16 Sobic.003G404600 regulatory protein, putative, expressed -
17 Sobic.003G184100 auxin-induced protein 5NG4, putative, expressed -
18 Sobic.001G284600 xyloglucan endotransglucosylase/hydrolase 29(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
19 Sobic.002G272900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
20 Sobic.004G024100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -


Gene co-expression network
sample Sobic003G351701 Sobic003G351701 Sobic002G233100 Sobic002G233100 Sobic003G351701--Sobic002G233100 Sobic005G168800 Sobic005G168800 Sobic003G351701--Sobic005G168800 Sobic004G269700 Sobic004G269700 Sobic003G351701--Sobic004G269700 Sobic007G165400 Sobic007G165400 Sobic003G351701--Sobic007G165400 Sobic007G186100 Sobic007G186100 Sobic003G351701--Sobic007G186100 Sobic002G318100 Sobic002G318100 Sobic003G351701--Sobic002G318100 Sobic009G130100 Sobic009G130100 Sobic003G351701--Sobic009G130100 Sobic005G142101 Sobic005G142101 Sobic003G351701--Sobic005G142101 Sobic007G115100 Sobic007G115100 Sobic003G351701--Sobic007G115100 Sobic004G001000 Sobic004G001000 Sobic002G233100--Sobic004G001000 Sobic003G366600 Sobic003G366600 Sobic002G233100--Sobic003G366600 Sobic003G184100 Sobic003G184100 Sobic002G233100--Sobic003G184100 Sobic002G312900 Sobic002G312900 Sobic002G233100--Sobic002G312900 Sobic005G043000 Sobic005G043000 Sobic002G233100--Sobic005G043000 Sobic002G196100 Sobic002G196100 Sobic002G233100--Sobic002G196100 Sobic003G404600 Sobic003G404600 Sobic002G233100--Sobic003G404600 Sobic007G161400 Sobic007G161400 Sobic002G233100--Sobic007G161400 Sobic006G059700 Sobic006G059700 Sobic002G233100--Sobic006G059700 Sobic003G416300 Sobic003G416300 Sobic005G168800--Sobic003G416300 Sobic003G079400 Sobic003G079400 Sobic005G168800--Sobic003G079400 Sobic001G082600 Sobic001G082600 Sobic005G168800--Sobic001G082600 Sobic004G046200 Sobic004G046200 Sobic005G168800--Sobic004G046200 Sobic008G106700 Sobic008G106700 Sobic005G168800--Sobic008G106700 Sobic003G050200 Sobic003G050200 Sobic005G168800--Sobic003G050200 Sobic009G179900 Sobic009G179900 Sobic005G168800--Sobic009G179900 Sobic001G139100 Sobic001G139100 Sobic005G168800--Sobic001G139100 Sobic001G325400 Sobic001G325400 Sobic005G168800--Sobic001G325400 Sobic004G269700--Sobic007G115100 Sobic010G023800 Sobic010G023800 Sobic004G269700--Sobic010G023800 Sobic001G418900 Sobic001G418900 Sobic004G269700--Sobic001G418900 Sobic010G195500 Sobic010G195500 Sobic004G269700--Sobic010G195500 Sobic003G357100 Sobic003G357100 Sobic004G269700--Sobic003G357100 Sobic001G224400 Sobic001G224400 Sobic004G269700--Sobic001G224400 Sobic008G129400 Sobic008G129400 Sobic004G269700--Sobic008G129400 Sobic001G505500 Sobic001G505500 Sobic004G269700--Sobic001G505500 Sobic010G153100 Sobic010G153100 Sobic004G269700--Sobic010G153100 Sobic002G185800 Sobic002G185800 Sobic007G165400--Sobic002G185800 Sobic003G203600 Sobic003G203600 Sobic007G165400--Sobic003G203600 Sobic003G015300 Sobic003G015300 Sobic007G165400--Sobic003G015300 Sobic001G067100 Sobic001G067100 Sobic007G165400--Sobic001G067100 Sobic007G176000 Sobic007G176000 Sobic007G165400--Sobic007G176000 Sobic001G264000 Sobic001G264000 Sobic007G165400--Sobic001G264000 Sobic010G110800 Sobic010G110800 Sobic007G165400--Sobic010G110800 Sobic006G197100 Sobic006G197100 Sobic007G165400--Sobic006G197100 Sobic002G001700 Sobic002G001700 Sobic007G165400--Sobic002G001700 Sobic001G494000 Sobic001G494000 Sobic007G186100--Sobic001G494000 Sobic003G343900 Sobic003G343900 Sobic007G186100--Sobic003G343900 Sobic003G119500 Sobic003G119500 Sobic007G186100--Sobic003G119500 Sobic004G062500 Sobic004G062500 Sobic007G186100--Sobic004G062500 Sobic010G062100 Sobic010G062100 Sobic007G186100--Sobic010G062100 Sobic004G212300 Sobic004G212300 Sobic007G186100--Sobic004G212300 Sobic003G219800 Sobic003G219800 Sobic007G186100--Sobic003G219800 Sobic009G181800 Sobic009G181800 Sobic007G186100--Sobic009G181800 Sobic003G316000 Sobic003G316000 Sobic007G186100--Sobic003G316000 Sobic002G318100--Sobic003G079400 Sobic009G187200 Sobic009G187200 Sobic002G318100--Sobic009G187200 Sobic002G318100--Sobic001G082600 Sobic002G318100--Sobic003G316000 Sobic002G318100--Sobic008G106700 Sobic002G318100--Sobic004G046200 Sobic006G044100 Sobic006G044100 Sobic002G318100--Sobic006G044100 Sobic002G318100--Sobic005G168800 Sobic003G016100 Sobic003G016100 Sobic002G318100--Sobic003G016100 Sobic004G262500 Sobic004G262500 Sobic009G130100--Sobic004G262500 Sobic009G130100--Sobic003G366600 Sobic009G130100--Sobic003G404600 Sobic003G228200 Sobic003G228200 Sobic009G130100--Sobic003G228200 Sobic003G280400 Sobic003G280400 Sobic009G130100--Sobic003G280400 Sobic009G130100--Sobic006G059700 Sobic009G130100--Sobic006G197100 Sobic010G001000 Sobic010G001000 Sobic009G130100--Sobic010G001000 Sobic004G349125 Sobic004G349125 Sobic009G130100--Sobic004G349125 Sobic002G183400 Sobic002G183400 Sobic005G142101--Sobic002G183400 Sobic002G342000 Sobic002G342000 Sobic005G142101--Sobic002G342000 Sobic002G136700 Sobic002G136700 Sobic005G142101--Sobic002G136700 Sobic005G168100 Sobic005G168100 Sobic005G142101--Sobic005G168100 Sobic005G142101--Sobic003G357100 Sobic004G318100 Sobic004G318100 Sobic005G142101--Sobic004G318100 Sobic010G089500 Sobic010G089500 Sobic005G142101--Sobic010G089500 Sobic004G278000 Sobic004G278000 Sobic005G142101--Sobic004G278000 Sobic009G182200 Sobic009G182200 Sobic005G142101--Sobic009G182200 Sobic007G115100--Sobic001G418900 Sobic007G115100--Sobic004G269700 Sobic003G155400 Sobic003G155400 Sobic007G115100--Sobic003G155400 Sobic007G115100--Sobic001G505500 Sobic007G115100--Sobic010G153100 Sobic001G342200 Sobic001G342200 Sobic007G115100--Sobic001G342200 Sobic007G115100--Sobic010G023800 Sobic010G154700 Sobic010G154700 Sobic007G115100--Sobic010G154700 Sobic004G138800 Sobic004G138800 Sobic007G115100--Sobic004G138800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.