Gene annotation
Transcriptome id Sobic.003G353100.1
Synonym Sb03g039560
Functional annotation peptidase aspartic family protein, putative, expressed
UniProt A0A1B6Q6Z1
Pfam -
Panther DB PTHR33142 PTHR33142:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G02220 : -
RAP-DB (Rice) LOC_Os01g62584.1 : peptidase aspartic family protein, putative, expressed
MaizeGDB (Corn) Zm00025a026888
Brachypodium PNT73173
Barley HORVU3Hr1G086110.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G035700 OsMADS89 - MADS-box family gene with M-gamma type-box, expressed -
2 Sobic.003G073100 expressed protein -
3 Sobic.002G215300 expressed protein -
4 Sobic.010G106300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribonucleoside-diphosphate reductase small chain, putative, expressed K10808: ribonucleoside-diphosphate reductase subunit M2
5 Sobic.001G149800 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
6 Sobic.002G389000 cytochrome P450 72A1, putative, expressed -
7 Sobic.007G214400 EF hand family protein, putative, expressed -
8 Sobic.003G394400 ubiquitin family protein, putative, expressed -
9 Sobic.001G309600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -
10 Sobic.009G152600 -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
11 Sobic.002G389400 OsRCI2-10 - Hydrophobic protein LTI6A, expressed -
12 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
13 Sobic.010G198600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.010G031900 early nodulin 93 ENOD93 protein, putative, expressed -
15 Sobic.003G138300 expressed protein -
16 Sobic.001G115300 RNA recognition motif containing protein, putative, expressed -
17 Sobic.008G118700 respiratory burst oxidase, putative, expressed -
18 Sobic.004G260300 expressed protein -
19 Sobic.003G027400 VQ domain containing protein, putative, expressed -
20 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase


Gene co-expression network
sample Sobic003G353100 Sobic003G353100 Sobic009G035700 Sobic009G035700 Sobic003G353100--Sobic009G035700 Sobic003G073100 Sobic003G073100 Sobic003G353100--Sobic003G073100 Sobic002G215300 Sobic002G215300 Sobic003G353100--Sobic002G215300 Sobic010G106300 Sobic010G106300 Sobic003G353100--Sobic010G106300 Sobic001G149800 Sobic001G149800 Sobic003G353100--Sobic001G149800 Sobic002G389000 Sobic002G389000 Sobic003G353100--Sobic002G389000 Sobic007G214400 Sobic007G214400 Sobic003G353100--Sobic007G214400 Sobic003G394400 Sobic003G394400 Sobic003G353100--Sobic003G394400 Sobic001G309600 Sobic001G309600 Sobic003G353100--Sobic001G309600 Sobic009G035700--Sobic002G389000 Sobic010G198600 Sobic010G198600 Sobic009G035700--Sobic010G198600 Sobic003G327500 Sobic003G327500 Sobic009G035700--Sobic003G327500 Sobic009G035700--Sobic001G149800 Sobic009G035700--Sobic003G394400 Sobic001G254100 Sobic001G254100 Sobic009G035700--Sobic001G254100 Sobic008G118700 Sobic008G118700 Sobic009G035700--Sobic008G118700 Sobic009G035700--Sobic002G215300 Sobic010G031100 Sobic010G031100 Sobic009G035700--Sobic010G031100 Sobic006G230600 Sobic006G230600 Sobic003G073100--Sobic006G230600 Sobic003G073100--Sobic010G031100 Sobic004G088300 Sobic004G088300 Sobic003G073100--Sobic004G088300 Sobic009G148100 Sobic009G148100 Sobic003G073100--Sobic009G148100 Sobic003G073100--Sobic002G389000 Sobic004G210700 Sobic004G210700 Sobic003G073100--Sobic004G210700 Sobic006G230800 Sobic006G230800 Sobic003G073100--Sobic006G230800 Sobic001G525200 Sobic001G525200 Sobic003G073100--Sobic001G525200 Sobic003G145400 Sobic003G145400 Sobic003G073100--Sobic003G145400 Sobic002G215300--Sobic010G031100 Sobic003G138300 Sobic003G138300 Sobic002G215300--Sobic003G138300 Sobic002G215300--Sobic001G309600 Sobic002G215300--Sobic001G149800 Sobic010G032100 Sobic010G032100 Sobic002G215300--Sobic010G032100 Sobic006G032700 Sobic006G032700 Sobic002G215300--Sobic006G032700 Sobic001G481500 Sobic001G481500 Sobic002G215300--Sobic001G481500 Sobic010G031300 Sobic010G031300 Sobic002G215300--Sobic010G031300 Sobic002G215300--Sobic003G394400 Sobic001G130301 Sobic001G130301 Sobic010G106300--Sobic001G130301 Sobic003G346600 Sobic003G346600 Sobic010G106300--Sobic003G346600 Sobic010G060500 Sobic010G060500 Sobic010G106300--Sobic010G060500 Sobic001G537200 Sobic001G537200 Sobic010G106300--Sobic001G537200 Sobic007G197800 Sobic007G197800 Sobic010G106300--Sobic007G197800 Sobic004G008400 Sobic004G008400 Sobic010G106300--Sobic004G008400 Sobic006G116700 Sobic006G116700 Sobic010G106300--Sobic006G116700 Sobic006G201500 Sobic006G201500 Sobic010G106300--Sobic006G201500 Sobic003G322400 Sobic003G322400 Sobic010G106300--Sobic003G322400 Sobic001G149800--Sobic010G032100 Sobic002G068600 Sobic002G068600 Sobic001G149800--Sobic002G068600 Sobic001G149800--Sobic010G031100 Sobic001G149800--Sobic003G394400 Sobic003G086600 Sobic003G086600 Sobic001G149800--Sobic003G086600 Sobic001G149800--Sobic001G254100 Sobic001G107800 Sobic001G107800 Sobic001G149800--Sobic001G107800 Sobic001G149800--Sobic001G481500 Sobic001G149800--Sobic001G309600 Sobic002G389000--Sobic007G214400 Sobic001G371800 Sobic001G371800 Sobic002G389000--Sobic001G371800 Sobic002G389000--Sobic001G107800 Sobic002G389000--Sobic003G394400 Sobic001G076100 Sobic001G076100 Sobic002G389000--Sobic001G076100 Sobic002G389000--Sobic006G230600 Sobic002G389000--Sobic004G088300 Sobic002G261200 Sobic002G261200 Sobic002G389000--Sobic002G261200 Sobic002G389000--Sobic001G254100 Sobic007G214400--Sobic003G394400 Sobic007G214400--Sobic001G371800 Sobic007G214400--Sobic002G389000 Sobic007G214400--Sobic001G107800 Sobic007G214400--Sobic002G068600 Sobic007G214400--Sobic001G254100 Sobic007G214400--Sobic002G261200 Sobic007G214400--Sobic003G086600 Sobic007G214600 Sobic007G214600 Sobic007G214400--Sobic007G214600 Sobic003G394400--Sobic002G068600 Sobic003G394400--Sobic007G214400 Sobic003G394400--Sobic003G086600 Sobic003G394400--Sobic001G371800 Sobic004G166200 Sobic004G166200 Sobic003G394400--Sobic004G166200 Sobic003G394400--Sobic001G107800 Sobic003G355100 Sobic003G355100 Sobic003G394400--Sobic003G355100 Sobic003G148600 Sobic003G148600 Sobic003G394400--Sobic003G148600 Sobic003G394400--Sobic007G214600 Sobic001G397200 Sobic001G397200 Sobic001G309600--Sobic001G397200 Sobic001G309600--Sobic001G481500 Sobic001G309600--Sobic010G032100 Sobic001G309600--Sobic006G032700 Sobic001G309600--Sobic001G149800 Sobic001G309600--Sobic003G138300 Sobic001G309600--Sobic003G086600 Sobic001G309600--Sobic002G215300 Sobic001G481600 Sobic001G481600 Sobic001G309600--Sobic001G481600
Octagon: transcription factors


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