Gene annotation
Transcriptome id Sobic.003G360800.1
Synonym Sb03g040270
Functional annotation expressed protein
UniProt C5XQF7
Pfam PF13432
Panther DB PTHR26312 PTHR26312:SF83
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07280 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os01g63620.1 : expressed protein
MaizeGDB (Corn) Zm00025a043786 , Zm00025a037200 , Zm00025a039609 , Zm00025a026811
Brachypodium KQK10638 , KQK05985
Barley HORVU3Hr1G084970.1 , HORVU3Hr1G084970.3 , HORVU3Hr1G084970.2 , HORVU3Hr1G084970.5 , HORVU3Hr1G084970.4 , HORVU1Hr1G073460.2 , HORVU1Hr1G073460.1 , HORVU1Hr1G073400.1 , HORVU1Hr1G073400.2
Wheat TraesCS3D02G361500 , TraesCS3A02G368600 , TraesCS1A02G278600 , TraesCS1D02G277900 , TraesCS3B02G400100 , TraesCS1B02G287500
Populus -


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cDNA sequences
Sobic.003G360800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G006400 cytochrome P450, putative, expressed -
2 Sobic.010G186400 Tetratricopeptide repeat (TPR)-like superfamily protein(PubMedID : 26465154)@expressed protein -
3 Sobic.006G226601 - -
4 Sobic.004G269800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
5 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
6 Sobic.003G328100 expressed protein -
7 Sobic.001G118400 expressed protein -
8 Sobic.006G155500 expressed protein -
9 Sobic.001G276300 peptide transporter PTR2, putative, expressed -
10 Sobic.008G006100 MATE efflux protein, putative, expressed -
11 Sobic.006G110900 acetyltransferase, GNAT family, putative, expressed -
12 Sobic.003G397600 expressed protein -
13 Sobic.004G154400 drought-induced protein 1, putative, expressed -
14 Sobic.007G169100 glutathione S-transferase, N-terminal domain containing protein, expressed -
15 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
16 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
17 Sobic.002G225100 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
18 Sobic.002G061900 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
19 Sobic.003G179400 NLI interacting factor(NIF) family protein(PubMedID : 26320239)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
20 Sobic.002G005600 Aldolase-type TIM barrel family protein(PubMedID : 26465154)@SOR/SNZ family protein, putative, expressed K06215: pdxS, pyridoxal 5'-phosphate synthase pdxS subunit


Gene co-expression network
sample Sobic003G360800 Sobic003G360800 Sobic004G006400 Sobic004G006400 Sobic003G360800--Sobic004G006400 Sobic010G186400 Sobic010G186400 Sobic003G360800--Sobic010G186400 Sobic006G226601 Sobic006G226601 Sobic003G360800--Sobic006G226601 Sobic004G269800 Sobic004G269800 Sobic003G360800--Sobic004G269800 Sobic001G286600 Sobic001G286600 Sobic003G360800--Sobic001G286600 Sobic003G328100 Sobic003G328100 Sobic003G360800--Sobic003G328100 Sobic001G118400 Sobic001G118400 Sobic003G360800--Sobic001G118400 Sobic006G155500 Sobic006G155500 Sobic003G360800--Sobic006G155500 Sobic001G276300 Sobic001G276300 Sobic003G360800--Sobic001G276300 Sobic004G154400 Sobic004G154400 Sobic004G006400--Sobic004G154400 Sobic004G006400--Sobic001G286600 Sobic009G062400 Sobic009G062400 Sobic004G006400--Sobic009G062400 Sobic004G006400--Sobic003G328100 Sobic008G006100 Sobic008G006100 Sobic004G006400--Sobic008G006100 Sobic003G037300 Sobic003G037300 Sobic004G006400--Sobic003G037300 Sobic006G158700 Sobic006G158700 Sobic004G006400--Sobic006G158700 Sobic001G521200 Sobic001G521200 Sobic004G006400--Sobic001G521200 Sobic004G006400--Sobic006G226601 Sobic003G421400 Sobic003G421400 Sobic010G186400--Sobic003G421400 Sobic002G386400 Sobic002G386400 Sobic010G186400--Sobic002G386400 Sobic010G186400--Sobic003G360800 Sobic006G110900 Sobic006G110900 Sobic010G186400--Sobic006G110900 Sobic008G063200 Sobic008G063200 Sobic010G186400--Sobic008G063200 Sobic009G141400 Sobic009G141400 Sobic010G186400--Sobic009G141400 Sobic001G121100 Sobic001G121100 Sobic010G186400--Sobic001G121100 Sobic001G161300 Sobic001G161300 Sobic010G186400--Sobic001G161300 Sobic003G253300 Sobic003G253300 Sobic010G186400--Sobic003G253300 Sobic006G226601--Sobic001G276300 Sobic006G226601--Sobic003G328100 Sobic007G169100 Sobic007G169100 Sobic006G226601--Sobic007G169100 Sobic006G226601--Sobic004G006400 Sobic010G231500 Sobic010G231500 Sobic006G226601--Sobic010G231500 Sobic006G097500 Sobic006G097500 Sobic006G226601--Sobic006G097500 Sobic002G005600 Sobic002G005600 Sobic006G226601--Sobic002G005600 Sobic007G058001 Sobic007G058001 Sobic006G226601--Sobic007G058001 Sobic009G207900 Sobic009G207900 Sobic006G226601--Sobic009G207900 Sobic005G028800 Sobic005G028800 Sobic004G269800--Sobic005G028800 Sobic007G166300 Sobic007G166300 Sobic004G269800--Sobic007G166300 Sobic004G269800--Sobic001G276300 Sobic006G063900 Sobic006G063900 Sobic004G269800--Sobic006G063900 Sobic001G509200 Sobic001G509200 Sobic004G269800--Sobic001G509200 Sobic009G132000 Sobic009G132000 Sobic004G269800--Sobic009G132000 Sobic006G213700 Sobic006G213700 Sobic004G269800--Sobic006G213700 Sobic009G170200 Sobic009G170200 Sobic004G269800--Sobic009G170200 Sobic004G103300 Sobic004G103300 Sobic004G269800--Sobic004G103300 Sobic001G286600--Sobic004G154400 Sobic001G286600--Sobic009G062400 Sobic010G269400 Sobic010G269400 Sobic001G286600--Sobic010G269400 Sobic010G058200 Sobic010G058200 Sobic001G286600--Sobic010G058200 Sobic001G286600--Sobic001G118400 Sobic001G286600--Sobic003G328100 Sobic001G286600--Sobic006G155500 Sobic001G286600--Sobic006G110900 Sobic003G070900 Sobic003G070900 Sobic001G286600--Sobic003G070900 Sobic003G328100--Sobic007G169100 Sobic003G328100--Sobic001G118400 Sobic003G328100--Sobic006G155500 Sobic006G140700 Sobic006G140700 Sobic003G328100--Sobic006G140700 Sobic007G107700 Sobic007G107700 Sobic003G328100--Sobic007G107700 Sobic003G328100--Sobic001G286600 Sobic003G328100--Sobic010G231500 Sobic004G281900 Sobic004G281900 Sobic003G328100--Sobic004G281900 Sobic003G328100--Sobic006G097500 Sobic001G118400--Sobic006G155500 Sobic001G118400--Sobic003G070900 Sobic001G118400--Sobic003G328100 Sobic004G165900 Sobic004G165900 Sobic001G118400--Sobic004G165900 Sobic001G118400--Sobic001G286600 Sobic002G061900 Sobic002G061900 Sobic001G118400--Sobic002G061900 Sobic010G056300 Sobic010G056300 Sobic001G118400--Sobic010G056300 Sobic004G252500 Sobic004G252500 Sobic001G118400--Sobic004G252500 Sobic001G118400--Sobic006G140700 Sobic006G155500--Sobic001G118400 Sobic006G050400 Sobic006G050400 Sobic006G155500--Sobic006G050400 Sobic006G155500--Sobic003G328100 Sobic006G155500--Sobic003G253300 Sobic006G155500--Sobic001G286600 Sobic006G155500--Sobic006G110900 Sobic006G155500--Sobic002G061900 Sobic006G155500--Sobic003G070900 Sobic006G155500--Sobic006G097500 Sobic007G135800 Sobic007G135800 Sobic001G276300--Sobic007G135800 Sobic001G276300--Sobic001G509200 Sobic001G276300--Sobic005G028800 Sobic001G276300--Sobic006G213700 Sobic003G380200 Sobic003G380200 Sobic001G276300--Sobic003G380200 Sobic001G276300--Sobic006G226601 Sobic001G276300--Sobic010G231500 Sobic001G276300--Sobic007G169100 Sobic002G225100 Sobic002G225100 Sobic001G276300--Sobic002G225100
Octagon: transcription factors


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