Gene annotation
Transcriptome id Sobic.004G031501.1
Synonym -
Functional annotation -
UniProt A0A1Z5RKP0
Pfam PF11443
Panther DB PTHR31373 PTHR31373:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13210 : Uncharacterised conserved protein UCP015417, vWA
RAP-DB (Rice) LOC_Os09g32370.1 : gp176, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK16852 , KQK11816 , KQK11817 , KQK19864
Barley HORVU7Hr1G112960.2 , HORVU7Hr1G112960.3 , HORVU7Hr1G112960.1 , HORVU5Hr1G081560.3 , HORVU5Hr1G081560.2 , HORVU5Hr1G081560.5 , HORVU5Hr1G081560.4 , HORVU3Hr1G117270.1 , HORVU3Hr1G117270.2 , HORVU5Hr1G079400.3 , HORVU5Hr1G079400.2 , HORVU5Hr1G079400.1 , HORVU6Hr1G013080.4 , HORVU6Hr1G013080.1 , HORVU6Hr1G013080.2 , HORVU6Hr1G013080.3 , HORVU5Hr1G079390.2 , HORVU5Hr1G079390.1 , HORVU7Hr1G112970.1
Wheat TraesCS5A02G319700 , TraesCS5D02G325700 , TraesCS7B02G410900 , TraesCS7D02G490900 , TraesCS5B02G319900 , TraesCS7A02G503000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G111750 - -
2 Sobic.003G091300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
3 Sobic.002G178700 ubiquitin fusion protein, putative, expressed -
4 Sobic.003G006000 expressed protein -
5 Sobic.001G137500 ankyrin, putative, expressed -
6 Sobic.008G188800 ankyrin repeat domain-containing protein, putative, expressed -
7 Sobic.001G288000 ankyrin repeat domain containing protein, putative, expressed -
8 Sobic.002G258000 homologous to AGL2 and AGL4: expression analysis and mapping data suggest that it is the ortholog of OsMADS24.(PubMedID : 9065695)@OsMADS8 - MADS-box family gene with MIKCc type-box, expressed -
9 Sobic.007G012600 - -
10 Sobic.003G396500 ZOS5-12 - C2H2 zinc finger protein, expressed -
11 Sobic.001G419500 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
12 Sobic.006G152700 - -
13 Sobic.002G205000 ZOS9-06 - C2H2 zinc finger protein, expressed -
14 Sobic.002G178800 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
15 Sobic.007G146200 pectinesterase, putative, expressed K01051: pectinesterase
16 Sobic.001G171001 - -
17 Sobic.001G137400 ankyrin, putative, expressed -
18 Sobic.003G090000 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
19 Sobic.001G457600 piwi domain containing protein, expressed -
20 Sobic.003G072700 expressed protein -


Gene co-expression network
sample Sobic004G031501 Sobic004G031501 Sobic010G111750 Sobic010G111750 Sobic004G031501--Sobic010G111750 Sobic003G091300 Sobic003G091300 Sobic004G031501--Sobic003G091300 Sobic002G178700 Sobic002G178700 Sobic004G031501--Sobic002G178700 Sobic003G006000 Sobic003G006000 Sobic004G031501--Sobic003G006000 Sobic001G137500 Sobic001G137500 Sobic004G031501--Sobic001G137500 Sobic008G188800 Sobic008G188800 Sobic004G031501--Sobic008G188800 Sobic001G288000 Sobic001G288000 Sobic004G031501--Sobic001G288000 Sobic002G258000 Sobic002G258000 Sobic004G031501--Sobic002G258000 Sobic007G012600 Sobic007G012600 Sobic004G031501--Sobic007G012600 Sobic010G111750--Sobic003G091300 Sobic010G111750--Sobic002G178700 Sobic010G111750--Sobic003G006000 Sobic010G111750--Sobic002G258000 Sobic001G419500 Sobic001G419500 Sobic010G111750--Sobic001G419500 Sobic010G111750--Sobic001G137500 Sobic010G111750--Sobic004G031501 Sobic002G078900 Sobic002G078900 Sobic010G111750--Sobic002G078900 Sobic010G111750--Sobic007G012600 Sobic003G091300--Sobic010G111750 Sobic003G091300--Sobic001G288000 Sobic003G091300--Sobic002G178700 Sobic003G091300--Sobic001G137500 Sobic003G091300--Sobic003G006000 Sobic003G091300--Sobic002G258000 Sobic003G091300--Sobic001G419500 Sobic002G205000 Sobic002G205000 Sobic003G091300--Sobic002G205000 Sobic003G091300--Sobic004G031501 Sobic002G178700--Sobic001G419500 Sobic002G178700--Sobic003G006000 Sobic002G178700--Sobic001G137500 Sobic003G088600 Sobic003G088600 Sobic002G178700--Sobic003G088600 Sobic009G063700 Sobic009G063700 Sobic002G178700--Sobic009G063700 Sobic002G178700--Sobic002G078900 Sobic001G459400 Sobic001G459400 Sobic002G178700--Sobic001G459400 Sobic008G137700 Sobic008G137700 Sobic002G178700--Sobic008G137700 Sobic003G300000 Sobic003G300000 Sobic002G178700--Sobic003G300000 Sobic003G006000--Sobic002G178700 Sobic003G006000--Sobic001G137500 Sobic003G006000--Sobic001G419500 Sobic006G271600 Sobic006G271600 Sobic003G006000--Sobic006G271600 Sobic003G006000--Sobic002G078900 Sobic003G006000--Sobic003G088600 Sobic009G243000 Sobic009G243000 Sobic003G006000--Sobic009G243000 Sobic003G006000--Sobic002G258000 Sobic001G457600 Sobic001G457600 Sobic003G006000--Sobic001G457600 Sobic001G137500--Sobic001G419500 Sobic001G137500--Sobic002G258000 Sobic001G137500--Sobic001G457600 Sobic001G137500--Sobic002G178700 Sobic001G137500--Sobic003G006000 Sobic007G193300 Sobic007G193300 Sobic001G137500--Sobic007G193300 Sobic001G137400 Sobic001G137400 Sobic001G137500--Sobic001G137400 Sobic010G194600 Sobic010G194600 Sobic001G137500--Sobic010G194600 Sobic001G137500--Sobic003G088600 Sobic007G146200 Sobic007G146200 Sobic008G188800--Sobic007G146200 Sobic005G008850 Sobic005G008850 Sobic008G188800--Sobic005G008850 Sobic006G152700 Sobic006G152700 Sobic008G188800--Sobic006G152700 Sobic009G125800 Sobic009G125800 Sobic008G188800--Sobic009G125800 Sobic008G140600 Sobic008G140600 Sobic008G188800--Sobic008G140600 Sobic003G377300 Sobic003G377300 Sobic008G188800--Sobic003G377300 Sobic002G322700 Sobic002G322700 Sobic008G188800--Sobic002G322700 Sobic003G072700 Sobic003G072700 Sobic008G188800--Sobic003G072700 Sobic010G009700 Sobic010G009700 Sobic008G188800--Sobic010G009700 Sobic001G288000--Sobic001G137400 Sobic001G288000--Sobic001G137500 Sobic001G288000--Sobic003G091300 Sobic001G288000--Sobic002G258000 Sobic001G288000--Sobic007G193300 Sobic002G299200 Sobic002G299200 Sobic001G288000--Sobic002G299200 Sobic001G288000--Sobic003G006000 Sobic001G288000--Sobic002G178700 Sobic001G288000--Sobic001G419500 Sobic002G258000--Sobic001G137500 Sobic002G258000--Sobic001G457600 Sobic002G258000--Sobic001G419500 Sobic002G258000--Sobic001G137400 Sobic002G258000--Sobic003G006000 Sobic002G258000--Sobic009G243000 Sobic002G258000--Sobic007G193300 Sobic002G258000--Sobic010G194600 Sobic002G258000--Sobic002G178700 Sobic007G012600--Sobic006G152700 Sobic001G171001 Sobic001G171001 Sobic007G012600--Sobic001G171001 Sobic007G012600--Sobic010G111750 Sobic007G012600--Sobic002G258000 Sobic003G396500 Sobic003G396500 Sobic007G012600--Sobic003G396500 Sobic007G012600--Sobic001G288000 Sobic007G012600--Sobic001G137500 Sobic007G012600--Sobic003G091300 Sobic010G243100 Sobic010G243100 Sobic007G012600--Sobic010G243100
Octagon: transcription factors


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