Gene annotation
Transcriptome id Sobic.004G033800.2,Sobic.004G033800.1
Synonym Sb04g002910
Functional annotation expressed protein
UniProt C5XTY4 , A0A1Z5RL67
Pfam PF02845
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g04325.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G333500 proteasome maturation factor UMP1 family protein, expressed K11599: POMP, proteasome maturation protein
2 Sobic.009G191200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
3 Sobic.010G023900 S10/S20 domain containing ribosomal protein, putative, expressed K02969: RP-S20e, small subunit ribosomal protein S20e
4 Sobic.007G053300 40S ribosomal protein S3-1, putative, expressed K02985: RP-S3e, small subunit ribosomal protein S3e
5 Sobic.009G233400 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
6 Sobic.003G436700 40S ribosomal protein S10, putative, expressed K02947: RP-S10e, small subunit ribosomal protein S10e
7 Sobic.009G173500 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
8 Sobic.001G537200 transcription factor BTF3, putative, expressed K01527: EGD1, nascent polypeptide-associated complex subunit beta
9 Sobic.010G060500 60S ribosomal protein L23A, putative, expressed K02893: RP-L23Ae, large subunit ribosomal protein L23Ae
10 Sobic.006G115000 LSM domain containing protein, expressed K11087: SNRPD1, small nuclear ribonucleoprotein D1
11 Sobic.002G379500 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
12 Sobic.001G334300 - K02966: RP-S19e, small subunit ribosomal protein S19e
13 Sobic.001G016400 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
14 Sobic.001G459900 leucine-rich repeat resistance protein, putative, expressed -
15 Sobic.007G018300 60S acidic ribosomal protein, putative, expressed K02942: RP-LP1, large subunit ribosomal protein LP1
16 Sobic.001G377800 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
17 Sobic.009G180000 OsCam1-3 - Calmodulin, expressed K02183: calmodulin
18 Sobic.009G212200 expressed protein -
19 Sobic.002G218000 expressed protein K13528: mediator of RNA polymerase II transcription subunit 20
20 Sobic.006G213000 ribosomal protein S17, putative, expressed K02949: RP-S11e, small subunit ribosomal protein S11e


Gene co-expression network
sample Sobic004G033800 Sobic004G033800 Sobic004G333500 Sobic004G333500 Sobic004G033800--Sobic004G333500 Sobic009G191200 Sobic009G191200 Sobic004G033800--Sobic009G191200 Sobic010G023900 Sobic010G023900 Sobic004G033800--Sobic010G023900 Sobic007G053300 Sobic007G053300 Sobic004G033800--Sobic007G053300 Sobic009G233400 Sobic009G233400 Sobic004G033800--Sobic009G233400 Sobic003G436700 Sobic003G436700 Sobic004G033800--Sobic003G436700 Sobic009G173500 Sobic009G173500 Sobic004G033800--Sobic009G173500 Sobic001G537200 Sobic001G537200 Sobic004G033800--Sobic001G537200 Sobic010G060500 Sobic010G060500 Sobic004G033800--Sobic010G060500 Sobic009G180000 Sobic009G180000 Sobic004G333500--Sobic009G180000 Sobic001G084900 Sobic001G084900 Sobic004G333500--Sobic001G084900 Sobic003G215700 Sobic003G215700 Sobic004G333500--Sobic003G215700 Sobic007G018300 Sobic007G018300 Sobic004G333500--Sobic007G018300 Sobic006G083500 Sobic006G083500 Sobic004G333500--Sobic006G083500 Sobic001G483100 Sobic001G483100 Sobic004G333500--Sobic001G483100 Sobic001G533500 Sobic001G533500 Sobic004G333500--Sobic001G533500 Sobic004G333500--Sobic001G537200 Sobic010G204500 Sobic010G204500 Sobic004G333500--Sobic010G204500 Sobic009G191200--Sobic009G233400 Sobic008G135000 Sobic008G135000 Sobic009G191200--Sobic008G135000 Sobic001G334300 Sobic001G334300 Sobic009G191200--Sobic001G334300 Sobic001G058900 Sobic001G058900 Sobic009G191200--Sobic001G058900 Sobic002G115000 Sobic002G115000 Sobic009G191200--Sobic002G115000 Sobic002G049300 Sobic002G049300 Sobic009G191200--Sobic002G049300 Sobic003G280700 Sobic003G280700 Sobic009G191200--Sobic003G280700 Sobic001G085400 Sobic001G085400 Sobic009G191200--Sobic001G085400 Sobic002G304900 Sobic002G304900 Sobic009G191200--Sobic002G304900 Sobic004G342400 Sobic004G342400 Sobic010G023900--Sobic004G342400 Sobic010G023900--Sobic001G334300 Sobic009G227400 Sobic009G227400 Sobic010G023900--Sobic009G227400 Sobic002G286900 Sobic002G286900 Sobic010G023900--Sobic002G286900 Sobic003G387900 Sobic003G387900 Sobic010G023900--Sobic003G387900 Sobic009G179100 Sobic009G179100 Sobic010G023900--Sobic009G179100 Sobic010G023900--Sobic009G233400 Sobic006G213000 Sobic006G213000 Sobic010G023900--Sobic006G213000 Sobic001G226500 Sobic001G226500 Sobic010G023900--Sobic001G226500 Sobic007G053300--Sobic006G213000 Sobic009G076400 Sobic009G076400 Sobic007G053300--Sobic009G076400 Sobic006G137100 Sobic006G137100 Sobic007G053300--Sobic006G137100 Sobic007G019400 Sobic007G019400 Sobic007G053300--Sobic007G019400 Sobic003G249700 Sobic003G249700 Sobic007G053300--Sobic003G249700 Sobic007G053300--Sobic001G226500 Sobic001G403500 Sobic001G403500 Sobic007G053300--Sobic001G403500 Sobic004G198400 Sobic004G198400 Sobic007G053300--Sobic004G198400 Sobic002G379500 Sobic002G379500 Sobic007G053300--Sobic002G379500 Sobic009G233400--Sobic001G334300 Sobic009G233400--Sobic002G304900 Sobic010G069400 Sobic010G069400 Sobic009G233400--Sobic010G069400 Sobic001G039400 Sobic001G039400 Sobic009G233400--Sobic001G039400 Sobic005G050500 Sobic005G050500 Sobic009G233400--Sobic005G050500 Sobic009G233400--Sobic001G058900 Sobic009G233400--Sobic003G249700 Sobic003G109600 Sobic003G109600 Sobic009G233400--Sobic003G109600 Sobic009G233400--Sobic001G085400 Sobic004G008400 Sobic004G008400 Sobic003G436700--Sobic004G008400 Sobic006G116700 Sobic006G116700 Sobic003G436700--Sobic006G116700 Sobic009G050300 Sobic009G050300 Sobic003G436700--Sobic009G050300 Sobic010G251600 Sobic010G251600 Sobic003G436700--Sobic010G251600 Sobic006G067800 Sobic006G067800 Sobic003G436700--Sobic006G067800 Sobic007G178600 Sobic007G178600 Sobic003G436700--Sobic007G178600 Sobic002G081600 Sobic002G081600 Sobic003G436700--Sobic002G081600 Sobic009G215200 Sobic009G215200 Sobic003G436700--Sobic009G215200 Sobic003G436700--Sobic002G379500 Sobic009G173500--Sobic001G039400 Sobic009G173500--Sobic001G226500 Sobic009G173500--Sobic009G233400 Sobic009G223300 Sobic009G223300 Sobic009G173500--Sobic009G223300 Sobic009G173500--Sobic003G109600 Sobic003G078200 Sobic003G078200 Sobic009G173500--Sobic003G078200 Sobic009G173500--Sobic003G249700 Sobic009G173500--Sobic009G179100 Sobic010G070500 Sobic010G070500 Sobic009G173500--Sobic010G070500 Sobic001G537200--Sobic009G050300 Sobic001G018900 Sobic001G018900 Sobic001G537200--Sobic001G018900 Sobic007G197800 Sobic007G197800 Sobic001G537200--Sobic007G197800 Sobic001G537200--Sobic002G379500 Sobic001G537200--Sobic009G215200 Sobic007G019000 Sobic007G019000 Sobic001G537200--Sobic007G019000 Sobic001G537200--Sobic006G116700 Sobic001G130301 Sobic001G130301 Sobic001G537200--Sobic001G130301 Sobic001G537200--Sobic001G403500 Sobic003G346600 Sobic003G346600 Sobic010G060500--Sobic003G346600 Sobic010G060500--Sobic006G137100 Sobic010G060500--Sobic004G008400 Sobic009G166500 Sobic009G166500 Sobic010G060500--Sobic009G166500 Sobic010G060500--Sobic009G050300 Sobic010G060500--Sobic007G178600 Sobic002G255300 Sobic002G255300 Sobic010G060500--Sobic002G255300 Sobic010G060500--Sobic006G213000 Sobic009G163800 Sobic009G163800 Sobic010G060500--Sobic009G163800
Octagon: transcription factors


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