Gene annotation
Transcriptome id Sobic.004G073100.1
Synonym ATERF3, ethylene response factor 43, Sb04g006080, SbERF43, ERF3
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5XX22
Pfam PF00847
Panther DB PTHR31677 PTHR31677:SF20
NCBI CDD -
KEGG Orthology K09286; EREBP-like factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G50640 : ethylene responsive element binding factor 3
RAP-DB (Rice) LOC_Os02g09650.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029907 , Zm00025a019372 , Zm00025a034702
Brachypodium KQJ95603 , KQJ93763
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G073100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G220200 protein kinase family protein, putative, expressed K17541: SCY1-like protein 2
2 Sobic.001G533700 STE_PAK_Ste20_STLK.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
3 Sobic.010G223700 MYB transcription factor, putative, expressed -
4 Sobic.006G258500 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
5 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
6 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
7 Sobic.003G197800 peptidyl-prolyl cis-trans isomerase, putative, expressed K12737: peptidyl-prolyl cis-trans isomerase SDCCAG10
8 Sobic.008G063000 transcriptional corepressor SEUSS, putative, expressed -
9 Sobic.005G023900 expressed protein -
10 Sobic.001G420000 expressed protein -
11 Sobic.001G010300 WD domain, G-beta repeat domain containing protein, expressed -
12 Sobic.009G215800 OsFBX173 - F-box domain containing protein, expressed -
13 Sobic.004G158200 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.001G375700 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
15 Sobic.001G205200 expressed protein -
16 Sobic.007G160600 CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
17 Sobic.002G186000 CD2-binding protein-related, putative, expressed K13099: CD2BP2, CD2 antigen cytoplasmic tail-binding protein 2
18 Sobic.001G486300 phosphatidylinositol transfer, putative, expressed -
19 Sobic.010G056000 GAGA-binding protein, putative, expressed -
20 Sobic.002G380500 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12891: splicing factor, arginine/serine-rich 2


Gene co-expression network
sample Sobic004G073100 Sobic004G073100 Sobic003G220200 Sobic003G220200 Sobic004G073100--Sobic003G220200 Sobic001G533700 Sobic001G533700 Sobic004G073100--Sobic001G533700 Sobic010G223700 Sobic010G223700 Sobic004G073100--Sobic010G223700 Sobic006G258500 Sobic006G258500 Sobic004G073100--Sobic006G258500 Sobic003G241200 Sobic003G241200 Sobic004G073100--Sobic003G241200 Sobic004G084300 Sobic004G084300 Sobic004G073100--Sobic004G084300 Sobic003G197800 Sobic003G197800 Sobic004G073100--Sobic003G197800 Sobic008G063000 Sobic008G063000 Sobic004G073100--Sobic008G063000 Sobic005G023900 Sobic005G023900 Sobic004G073100--Sobic005G023900 Sobic007G145200 Sobic007G145200 Sobic003G220200--Sobic007G145200 Sobic002G157300 Sobic002G157300 Sobic003G220200--Sobic002G157300 Sobic002G157000 Sobic002G157000 Sobic003G220200--Sobic002G157000 Sobic002G320500 Sobic002G320500 Sobic003G220200--Sobic002G320500 Sobic007G137900 Sobic007G137900 Sobic003G220200--Sobic007G137900 Sobic001G251700 Sobic001G251700 Sobic003G220200--Sobic001G251700 Sobic007G011400 Sobic007G011400 Sobic003G220200--Sobic007G011400 Sobic004G349900 Sobic004G349900 Sobic003G220200--Sobic004G349900 Sobic001G107500 Sobic001G107500 Sobic003G220200--Sobic001G107500 Sobic004G158200 Sobic004G158200 Sobic001G533700--Sobic004G158200 Sobic005G021500 Sobic005G021500 Sobic001G533700--Sobic005G021500 Sobic001G205200 Sobic001G205200 Sobic001G533700--Sobic001G205200 Sobic007G167500 Sobic007G167500 Sobic001G533700--Sobic007G167500 Sobic002G006900 Sobic002G006900 Sobic001G533700--Sobic002G006900 Sobic008G173900 Sobic008G173900 Sobic001G533700--Sobic008G173900 Sobic006G048500 Sobic006G048500 Sobic001G533700--Sobic006G048500 Sobic009G065100 Sobic009G065100 Sobic001G533700--Sobic009G065100 Sobic009G210500 Sobic009G210500 Sobic001G533700--Sobic009G210500 Sobic003G309200 Sobic003G309200 Sobic010G223700--Sobic003G309200 Sobic003G221900 Sobic003G221900 Sobic010G223700--Sobic003G221900 Sobic001G122832 Sobic001G122832 Sobic010G223700--Sobic001G122832 Sobic010G025300 Sobic010G025300 Sobic010G223700--Sobic010G025300 Sobic001G425800 Sobic001G425800 Sobic010G223700--Sobic001G425800 Sobic001G389100 Sobic001G389100 Sobic010G223700--Sobic001G389100 Sobic004G117900 Sobic004G117900 Sobic010G223700--Sobic004G117900 Sobic003G411900 Sobic003G411900 Sobic010G223700--Sobic003G411900 Sobic003G131400 Sobic003G131400 Sobic010G223700--Sobic003G131400 Sobic010G056000 Sobic010G056000 Sobic006G258500--Sobic010G056000 Sobic004G290800 Sobic004G290800 Sobic006G258500--Sobic004G290800 Sobic009G215800 Sobic009G215800 Sobic006G258500--Sobic009G215800 Sobic007G134600 Sobic007G134600 Sobic006G258500--Sobic007G134600 Sobic001G111900 Sobic001G111900 Sobic006G258500--Sobic001G111900 Sobic006G258500--Sobic001G107500 Sobic009G134500 Sobic009G134500 Sobic006G258500--Sobic009G134500 Sobic003G383300 Sobic003G383300 Sobic006G258500--Sobic003G383300 Sobic009G127900 Sobic009G127900 Sobic006G258500--Sobic009G127900 Sobic003G241200--Sobic004G084300 Sobic006G165000 Sobic006G165000 Sobic003G241200--Sobic006G165000 Sobic006G032400 Sobic006G032400 Sobic003G241200--Sobic006G032400 Sobic002G248400 Sobic002G248400 Sobic003G241200--Sobic002G248400 Sobic003G241200--Sobic002G320500 Sobic003G173950 Sobic003G173950 Sobic003G241200--Sobic003G173950 Sobic010G236400 Sobic010G236400 Sobic003G241200--Sobic010G236400 Sobic003G200200 Sobic003G200200 Sobic003G241200--Sobic003G200200 Sobic003G241200--Sobic002G157000 Sobic008G047800 Sobic008G047800 Sobic004G084300--Sobic008G047800 Sobic001G222500 Sobic001G222500 Sobic004G084300--Sobic001G222500 Sobic004G084300--Sobic003G241200 Sobic004G084300--Sobic002G006900 Sobic004G084300--Sobic010G236400 Sobic009G040600 Sobic009G040600 Sobic004G084300--Sobic009G040600 Sobic008G067600 Sobic008G067600 Sobic004G084300--Sobic008G067600 Sobic004G084300--Sobic009G065100 Sobic007G132400 Sobic007G132400 Sobic004G084300--Sobic007G132400 Sobic003G197800--Sobic002G157000 Sobic003G197800--Sobic002G320500 Sobic002G186000 Sobic002G186000 Sobic003G197800--Sobic002G186000 Sobic002G151600 Sobic002G151600 Sobic003G197800--Sobic002G151600 Sobic006G133800 Sobic006G133800 Sobic003G197800--Sobic006G133800 Sobic003G197800--Sobic009G065100 Sobic003G197800--Sobic003G173950 Sobic003G197800--Sobic002G248400 Sobic001G206100 Sobic001G206100 Sobic003G197800--Sobic001G206100 Sobic001G094000 Sobic001G094000 Sobic008G063000--Sobic001G094000 Sobic003G268300 Sobic003G268300 Sobic008G063000--Sobic003G268300 Sobic006G246900 Sobic006G246900 Sobic008G063000--Sobic006G246900 Sobic008G063000--Sobic002G157000 Sobic008G063000--Sobic003G200200 Sobic008G063000--Sobic008G173900 Sobic008G063000--Sobic002G006900 Sobic002G144933 Sobic002G144933 Sobic008G063000--Sobic002G144933 Sobic004G145500 Sobic004G145500 Sobic008G063000--Sobic004G145500 Sobic005G023900--Sobic002G157000 Sobic005G023900--Sobic003G200200 Sobic001G413500 Sobic001G413500 Sobic005G023900--Sobic001G413500 Sobic001G497300 Sobic001G497300 Sobic005G023900--Sobic001G497300 Sobic005G023900--Sobic002G006900 Sobic001G486300 Sobic001G486300 Sobic005G023900--Sobic001G486300 Sobic005G023900--Sobic003G268300 Sobic007G065400 Sobic007G065400 Sobic005G023900--Sobic007G065400 Sobic005G023900--Sobic009G210500
Octagon: transcription factors


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