Gene annotation
Transcriptome id Sobic.004G102100.4,Sobic.004G102100.3,Sobic.004G102100.6,Sobic.004G102100.5,Sobic.004G102100.2,Sobic.004G102100.1
Synonym Sb04g008350
Functional annotation leucine-rich repeat-containing protein kinase family protein, putative, expressed
UniProt A0A1Z5RM65 , A0A194YPW7 , A0A194YNU8 , A0A1Z5RLS6 , A0A194YNS2 , A0A194YNS5
Pfam PF00069 PF11721 PF11721
Panther DB PTHR27006 PTHR27006:SF37 PTHR27006 PTHR27006:SF34
NCBI CDD KOG1187; Serine/threonine protein kinase KOG4579Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G53440 : Leucine-rich repeat transmembrane protein kinase
RAP-DB (Rice) LOC_Os02g13850.1 : leucine-rich repeat-containing protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a020064
Brachypodium KQJ94159 , PNT66244 , PNT66245 , PNT66246 , KQJ94161 , KQJ94162 , KQJ94163
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G032700 heat shock protein DnaJ, putative, expressed -
2 Sobic.009G094900 sugar porter, putative, expressed -
3 Sobic.001G308200 cytochrome P450 97B2, putative, expressed K09837: LUT1, carotenoid epsilon hydroxylase
4 Sobic.002G116800 expressed protein -
5 Sobic.006G256600 expressed protein -
6 Sobic.005G014700 aminotransferase, putative, expressed K11717: cysteine desulfurase / selenocysteine lyase
7 Sobic.010G255100 delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed K01698: hemB, porphobilinogen synthase
8 Sobic.010G109600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@angel, putative, expressed -
9 Sobic.010G086900 OsFBX187 - F-box domain containing protein, expressed -
10 Sobic.010G000600 BBF1 - 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains with a F5/8 type C discoidin domain, expressed -
11 Sobic.004G228200 thioredoxin, putative, expressed K03671: thioredoxin 1
12 Sobic.006G210400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
13 Sobic.007G169300 expressed protein -
14 Sobic.004G238900 methyltransferase domain containing protein, putative, expressed -
15 Sobic.002G230500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.002G303300 anthranilate phosphoribosyltransferase, putative, expressed -
17 Sobic.004G055500 inositol-1-monophosphatase, putative, expressed K01092: E3.1.3.25, IMPA, myo-inositol-1(or 4)-monophosphatase
18 Sobic.006G050000 TBC domain containing protein, expressed -
19 Sobic.003G200100 DUF630/DUF632 domains containing protein, putative, expressed -
20 Sobic.008G177200 amino acid permease, putative, expressed K13863: SLC7A1, solute carrier family 7 (cationic amino acid transporter), member 1


Gene co-expression network
sample Sobic004G102100 Sobic004G102100 Sobic001G032700 Sobic001G032700 Sobic004G102100--Sobic001G032700 Sobic009G094900 Sobic009G094900 Sobic004G102100--Sobic009G094900 Sobic001G308200 Sobic001G308200 Sobic004G102100--Sobic001G308200 Sobic002G116800 Sobic002G116800 Sobic004G102100--Sobic002G116800 Sobic006G256600 Sobic006G256600 Sobic004G102100--Sobic006G256600 Sobic005G014700 Sobic005G014700 Sobic004G102100--Sobic005G014700 Sobic010G255100 Sobic010G255100 Sobic004G102100--Sobic010G255100 Sobic010G109600 Sobic010G109600 Sobic004G102100--Sobic010G109600 Sobic010G086900 Sobic010G086900 Sobic004G102100--Sobic010G086900 Sobic004G054400 Sobic004G054400 Sobic001G032700--Sobic004G054400 Sobic001G512500 Sobic001G512500 Sobic001G032700--Sobic001G512500 Sobic001G327800 Sobic001G327800 Sobic001G032700--Sobic001G327800 Sobic001G032700--Sobic005G014700 Sobic004G163800 Sobic004G163800 Sobic001G032700--Sobic004G163800 Sobic003G343400 Sobic003G343400 Sobic001G032700--Sobic003G343400 Sobic001G309300 Sobic001G309300 Sobic001G032700--Sobic001G309300 Sobic001G032700--Sobic001G308200 Sobic002G231200 Sobic002G231200 Sobic001G032700--Sobic002G231200 Sobic001G016600 Sobic001G016600 Sobic009G094900--Sobic001G016600 Sobic007G105100 Sobic007G105100 Sobic009G094900--Sobic007G105100 Sobic006G058100 Sobic006G058100 Sobic009G094900--Sobic006G058100 Sobic002G143500 Sobic002G143500 Sobic009G094900--Sobic002G143500 Sobic004G208900 Sobic004G208900 Sobic009G094900--Sobic004G208900 Sobic005G112300 Sobic005G112300 Sobic009G094900--Sobic005G112300 Sobic009G027300 Sobic009G027300 Sobic009G094900--Sobic009G027300 Sobic001G289600 Sobic001G289600 Sobic009G094900--Sobic001G289600 Sobic008G150700 Sobic008G150700 Sobic009G094900--Sobic008G150700 Sobic001G308200--Sobic001G309300 Sobic001G308200--Sobic010G255100 Sobic006G106400 Sobic006G106400 Sobic001G308200--Sobic006G106400 Sobic006G010900 Sobic006G010900 Sobic001G308200--Sobic006G010900 Sobic008G073100 Sobic008G073100 Sobic001G308200--Sobic008G073100 Sobic001G308200--Sobic006G256600 Sobic001G126300 Sobic001G126300 Sobic001G308200--Sobic001G126300 Sobic004G336000 Sobic004G336000 Sobic001G308200--Sobic004G336000 Sobic004G011300 Sobic004G011300 Sobic001G308200--Sobic004G011300 Sobic007G189500 Sobic007G189500 Sobic002G116800--Sobic007G189500 Sobic006G213500 Sobic006G213500 Sobic002G116800--Sobic006G213500 Sobic002G140700 Sobic002G140700 Sobic002G116800--Sobic002G140700 Sobic008G003900 Sobic008G003900 Sobic002G116800--Sobic008G003900 Sobic004G238900 Sobic004G238900 Sobic002G116800--Sobic004G238900 Sobic007G161800 Sobic007G161800 Sobic002G116800--Sobic007G161800 Sobic001G261200 Sobic001G261200 Sobic002G116800--Sobic001G261200 Sobic010G168301 Sobic010G168301 Sobic002G116800--Sobic010G168301 Sobic002G116800--Sobic009G094900 Sobic006G256600--Sobic010G255100 Sobic003G085000 Sobic003G085000 Sobic006G256600--Sobic003G085000 Sobic001G291900 Sobic001G291900 Sobic006G256600--Sobic001G291900 Sobic006G210400 Sobic006G210400 Sobic006G256600--Sobic006G210400 Sobic002G297400 Sobic002G297400 Sobic006G256600--Sobic002G297400 Sobic006G055800 Sobic006G055800 Sobic006G256600--Sobic006G055800 Sobic005G002900 Sobic005G002900 Sobic006G256600--Sobic005G002900 Sobic006G256600--Sobic001G309300 Sobic004G065300 Sobic004G065300 Sobic006G256600--Sobic004G065300 Sobic003G067100 Sobic003G067100 Sobic005G014700--Sobic003G067100 Sobic001G102500 Sobic001G102500 Sobic005G014700--Sobic001G102500 Sobic002G043600 Sobic002G043600 Sobic005G014700--Sobic002G043600 Sobic005G014700--Sobic001G327800 Sobic005G014700--Sobic010G255100 Sobic005G014700--Sobic004G238900 Sobic005G014700--Sobic004G163800 Sobic002G156100 Sobic002G156100 Sobic005G014700--Sobic002G156100 Sobic005G014700--Sobic001G032700 Sobic010G255100--Sobic006G256600 Sobic010G255100--Sobic003G085000 Sobic001G382800 Sobic001G382800 Sobic010G255100--Sobic001G382800 Sobic010G255100--Sobic006G055800 Sobic010G255100--Sobic005G014700 Sobic003G128400 Sobic003G128400 Sobic010G255100--Sobic003G128400 Sobic010G255100--Sobic006G210400 Sobic010G255100--Sobic001G308200 Sobic010G255100--Sobic001G102500 Sobic010G197000 Sobic010G197000 Sobic010G109600--Sobic010G197000 Sobic004G333400 Sobic004G333400 Sobic010G109600--Sobic004G333400 Sobic003G084500 Sobic003G084500 Sobic010G109600--Sobic003G084500 Sobic003G141100 Sobic003G141100 Sobic010G109600--Sobic003G141100 Sobic001G450600 Sobic001G450600 Sobic010G109600--Sobic001G450600 Sobic009G014100 Sobic009G014100 Sobic010G109600--Sobic009G014100 Sobic010G109600--Sobic001G102500 Sobic001G283700 Sobic001G283700 Sobic010G109600--Sobic001G283700 Sobic008G172300 Sobic008G172300 Sobic010G109600--Sobic008G172300 Sobic001G249400 Sobic001G249400 Sobic010G086900--Sobic001G249400 Sobic009G046800 Sobic009G046800 Sobic010G086900--Sobic009G046800 Sobic010G100800 Sobic010G100800 Sobic010G086900--Sobic010G100800 Sobic002G378000 Sobic002G378000 Sobic010G086900--Sobic002G378000 Sobic001G300100 Sobic001G300100 Sobic010G086900--Sobic001G300100 Sobic004G003900 Sobic004G003900 Sobic010G086900--Sobic004G003900 Sobic002G404200 Sobic002G404200 Sobic010G086900--Sobic002G404200 Sobic008G067100 Sobic008G067100 Sobic010G086900--Sobic008G067100 Sobic004G019500 Sobic004G019500 Sobic010G086900--Sobic004G019500
Octagon: transcription factors


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