Gene annotation
Transcriptome id Sobic.004G131700.1
Synonym Sb04g012190
Functional annotation OsFBX46 - F-box domain containing protein, expressed
UniProt C5Y0J3
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF149
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G03970 : F-box associated ubiquitination effector family protein
RAP-DB (Rice) LOC_Os02g19200.1 : OsFBX46 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ87659
Barley -
Wheat TraesCS5D02G363100 , TraesCS5D02G363300 , TraesCS1A02G393700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G204400 OsFBX309 - F-box domain containing protein, expressed -
2 Sobic.010G278100 expressed protein -
3 Sobic.005G154700 OsFBX407 - F-box domain containing protein, expressed -
4 Sobic.002G316500 GRAS family transcription factor domain containing protein, expressed -
5 Sobic.001G267200 arginyl-tRNA synthetase, putative, expressed -
6 Sobic.008G020200 UDP-N-acetylglucosamine transferase subunit ALG14, putative, expressed K07441: beta-1,4-N-acetylglucosaminyltransferase
7 Sobic.010G144000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta
8 Sobic.004G012000 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
9 Sobic.007G130300 ES43 protein, putative, expressed -
10 Sobic.009G013100 rp3 protein, putative, expressed -
11 Sobic.003G374500 pentatricopeptide repeat domain containing protein, putative, expressed -
12 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
13 Sobic.010G260200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
15 Sobic.004G332000 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, putative, expressed K00736: alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
16 Sobic.001G085000 expressed protein -
17 Sobic.001G262900 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K10801: methyl-CpG-binding domain protein 4
18 Sobic.004G350100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
19 Sobic.004G227500 WD-40 repeat family protein, putative, expressed -
20 Sobic.006G065800 Trihelix Family(PubMedID : 24864043)@amino acid kinase, putative, expressed -


Gene co-expression network
sample Sobic004G131700 Sobic004G131700 Sobic004G204400 Sobic004G204400 Sobic004G131700--Sobic004G204400 Sobic010G278100 Sobic010G278100 Sobic004G131700--Sobic010G278100 Sobic005G154700 Sobic005G154700 Sobic004G131700--Sobic005G154700 Sobic002G316500 Sobic002G316500 Sobic004G131700--Sobic002G316500 Sobic001G267200 Sobic001G267200 Sobic004G131700--Sobic001G267200 Sobic008G020200 Sobic008G020200 Sobic004G131700--Sobic008G020200 Sobic010G144000 Sobic010G144000 Sobic004G131700--Sobic010G144000 Sobic004G012000 Sobic004G012000 Sobic004G131700--Sobic004G012000 Sobic007G130300 Sobic007G130300 Sobic004G131700--Sobic007G130300 Sobic004G121000 Sobic004G121000 Sobic004G204400--Sobic004G121000 Sobic003G266700 Sobic003G266700 Sobic004G204400--Sobic003G266700 Sobic002G224450 Sobic002G224450 Sobic004G204400--Sobic002G224450 Sobic003G366850 Sobic003G366850 Sobic004G204400--Sobic003G366850 Sobic008G065400 Sobic008G065400 Sobic004G204400--Sobic008G065400 Sobic003G374500 Sobic003G374500 Sobic004G204400--Sobic003G374500 Sobic003G436900 Sobic003G436900 Sobic004G204400--Sobic003G436900 Sobic001G262900 Sobic001G262900 Sobic004G204400--Sobic001G262900 Sobic002G400900 Sobic002G400900 Sobic004G204400--Sobic002G400900 Sobic003G045400 Sobic003G045400 Sobic010G278100--Sobic003G045400 Sobic002G313500 Sobic002G313500 Sobic010G278100--Sobic002G313500 Sobic001G467000 Sobic001G467000 Sobic010G278100--Sobic001G467000 Sobic004G301900 Sobic004G301900 Sobic010G278100--Sobic004G301900 Sobic001G512600 Sobic001G512600 Sobic010G278100--Sobic001G512600 Sobic001G041200 Sobic001G041200 Sobic010G278100--Sobic001G041200 Sobic004G072800 Sobic004G072800 Sobic010G278100--Sobic004G072800 Sobic004G350100 Sobic004G350100 Sobic010G278100--Sobic004G350100 Sobic001G085000 Sobic001G085000 Sobic010G278100--Sobic001G085000 Sobic005G154700--Sobic004G012000 Sobic004G026100 Sobic004G026100 Sobic005G154700--Sobic004G026100 Sobic004G197900 Sobic004G197900 Sobic005G154700--Sobic004G197900 Sobic009G040800 Sobic009G040800 Sobic005G154700--Sobic009G040800 Sobic005G015100 Sobic005G015100 Sobic005G154700--Sobic005G015100 Sobic005G127300 Sobic005G127300 Sobic005G154700--Sobic005G127300 Sobic009G000400 Sobic009G000400 Sobic005G154700--Sobic009G000400 Sobic010G235600 Sobic010G235600 Sobic005G154700--Sobic010G235600 Sobic007G079200 Sobic007G079200 Sobic005G154700--Sobic007G079200 Sobic004G227500 Sobic004G227500 Sobic002G316500--Sobic004G227500 Sobic009G013100 Sobic009G013100 Sobic002G316500--Sobic009G013100 Sobic010G229000 Sobic010G229000 Sobic002G316500--Sobic010G229000 Sobic008G099500 Sobic008G099500 Sobic002G316500--Sobic008G099500 Sobic002G316500--Sobic005G127300 Sobic010G046400 Sobic010G046400 Sobic002G316500--Sobic010G046400 Sobic008G000800 Sobic008G000800 Sobic002G316500--Sobic008G000800 Sobic007G195400 Sobic007G195400 Sobic002G316500--Sobic007G195400 Sobic002G316500--Sobic007G130300 Sobic001G267200--Sobic001G262900 Sobic001G267200--Sobic008G020200 Sobic009G042700 Sobic009G042700 Sobic001G267200--Sobic009G042700 Sobic010G089100 Sobic010G089100 Sobic001G267200--Sobic010G089100 Sobic004G048000 Sobic004G048000 Sobic001G267200--Sobic004G048000 Sobic004G002400 Sobic004G002400 Sobic001G267200--Sobic004G002400 Sobic008G025900 Sobic008G025900 Sobic001G267200--Sobic008G025900 Sobic008G189400 Sobic008G189400 Sobic001G267200--Sobic008G189400 Sobic010G056000 Sobic010G056000 Sobic001G267200--Sobic010G056000 Sobic004G283000 Sobic004G283000 Sobic008G020200--Sobic004G283000 Sobic010G202600 Sobic010G202600 Sobic008G020200--Sobic010G202600 Sobic003G248500 Sobic003G248500 Sobic008G020200--Sobic003G248500 Sobic008G020200--Sobic008G025900 Sobic010G263800 Sobic010G263800 Sobic008G020200--Sobic010G263800 Sobic002G157300 Sobic002G157300 Sobic008G020200--Sobic002G157300 Sobic009G030300 Sobic009G030300 Sobic008G020200--Sobic009G030300 Sobic003G185200 Sobic003G185200 Sobic008G020200--Sobic003G185200 Sobic007G191100 Sobic007G191100 Sobic008G020200--Sobic007G191100 Sobic010G144000--Sobic003G436900 Sobic005G142200 Sobic005G142200 Sobic010G144000--Sobic005G142200 Sobic002G221200 Sobic002G221200 Sobic010G144000--Sobic002G221200 Sobic004G317600 Sobic004G317600 Sobic010G144000--Sobic004G317600 Sobic010G144000--Sobic004G121000 Sobic001G240400 Sobic001G240400 Sobic010G144000--Sobic001G240400 Sobic004G092300 Sobic004G092300 Sobic010G144000--Sobic004G092300 Sobic001G305400 Sobic001G305400 Sobic010G144000--Sobic001G305400 Sobic008G045600 Sobic008G045600 Sobic010G144000--Sobic008G045600 Sobic004G012000--Sobic005G154700 Sobic004G088400 Sobic004G088400 Sobic004G012000--Sobic004G088400 Sobic001G296500 Sobic001G296500 Sobic004G012000--Sobic001G296500 Sobic008G117200 Sobic008G117200 Sobic004G012000--Sobic008G117200 Sobic003G336800 Sobic003G336800 Sobic004G012000--Sobic003G336800 Sobic003G239900 Sobic003G239900 Sobic004G012000--Sobic003G239900 Sobic004G012000--Sobic004G026100 Sobic002G197100 Sobic002G197100 Sobic004G012000--Sobic002G197100 Sobic007G095200 Sobic007G095200 Sobic004G012000--Sobic007G095200 Sobic007G130300--Sobic004G088400 Sobic007G008800 Sobic007G008800 Sobic007G130300--Sobic007G008800 Sobic003G026300 Sobic003G026300 Sobic007G130300--Sobic003G026300 Sobic002G177400 Sobic002G177400 Sobic007G130300--Sobic002G177400 Sobic010G269600 Sobic010G269600 Sobic007G130300--Sobic010G269600 Sobic002G362300 Sobic002G362300 Sobic007G130300--Sobic002G362300 Sobic007G130300--Sobic009G030300 Sobic003G346000 Sobic003G346000 Sobic007G130300--Sobic003G346000 Sobic007G063200 Sobic007G063200 Sobic007G130300--Sobic007G063200
Octagon: transcription factors


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