Gene annotation
Transcriptome id Sobic.004G191500.1
Synonym Sb04g023970
Functional annotation YGL010w, putative, expressed
UniProt C5XVR1
Pfam PF06127
Panther DB PTHR28026 PTHR28026:SF4
NCBI CDD KOG3292; Predicted membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G18720 : Protein of unknown function (DUF962)
RAP-DB (Rice) LOC_Os02g36870.1 : YGL010w, putative, expressed
MaizeGDB (Corn) Zm00025a020812
Brachypodium KQK00030
Barley HORVU6Hr1G080940.1 , HORVU6Hr1G080940.2 , HORVU3Hr1G095850.5 , HORVU3Hr1G095850.1 , HORVU3Hr1G095850.2
Wheat TraesCS3B02G473000 , TraesCS3A02G439000 , TraesCS3D02G431800
Populus -


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cDNA sequences
Sobic.004G191500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G332800 F-box/LRR-repeat protein 14, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
2 Sobic.008G169800 galactosyltransferase family protein, putative, expressed -
3 Sobic.002G123100 alpha-galactosidase precursor, putative, expressed K07407: E3.2.1.22B, galA, alpha-galactosidase
4 Sobic.001G218800 expressed protein -
5 Sobic.003G031200 translation initiation factor SUI1, putative, expressed -
6 Sobic.009G030400 eyes absent homolog 4, putative, expressed -
7 Sobic.003G159500 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.008G118500 tRNA synthetase, putative, expressed K01867: WARS, tryptophanyl-tRNA synthetase
9 Sobic.002G129200 DNA-directed RNA polymerase subunit, putative, expressed K03014: RPB6, DNA-directed RNA polymerases I, II, and III subunit RPABC2
10 Sobic.005G187500 GRF-interacting factor 2, putative, expressed -
11 Sobic.006G131900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ethylene-responsive protein related, putative, expressed -
12 Sobic.001G506000 N-acetylglucosaminyltransferase, putative, expressed -
13 Sobic.001G359700 expressed protein -
14 Sobic.003G004700 SOUL heme-binding protein, putative, expressed -
15 Sobic.004G247400 caleosin related protein, putative, expressed K17991: peroxygenase
16 Sobic.002G403200 ankyrin repeat domain containing protein, putative, expressed -
17 Sobic.001G434400 ufm1-conjugating enzyme 1, putative, expressed K12165: ufm1-conjugating enzyme 1
18 Sobic.002G280900 la domain containing protein, putative, expressed K18757: la-related protein 1
19 Sobic.003G436500 ubiquitin-fold modifier 1 precursor, putative, expressed K12162: ubiquitin-fold modifier 1
20 Sobic.001G423300 outer membrane protein, OMP85 family, putative, expressed -


Gene co-expression network
sample Sobic004G191500 Sobic004G191500 Sobic004G332800 Sobic004G332800 Sobic004G191500--Sobic004G332800 Sobic008G169800 Sobic008G169800 Sobic004G191500--Sobic008G169800 Sobic002G123100 Sobic002G123100 Sobic004G191500--Sobic002G123100 Sobic001G218800 Sobic001G218800 Sobic004G191500--Sobic001G218800 Sobic003G031200 Sobic003G031200 Sobic004G191500--Sobic003G031200 Sobic009G030400 Sobic009G030400 Sobic004G191500--Sobic009G030400 Sobic003G159500 Sobic003G159500 Sobic004G191500--Sobic003G159500 Sobic008G118500 Sobic008G118500 Sobic004G191500--Sobic008G118500 Sobic002G129200 Sobic002G129200 Sobic004G191500--Sobic002G129200 Sobic004G332800--Sobic002G123100 Sobic005G074400 Sobic005G074400 Sobic004G332800--Sobic005G074400 Sobic004G210000 Sobic004G210000 Sobic004G332800--Sobic004G210000 Sobic004G332800--Sobic004G191500 Sobic001G150300 Sobic001G150300 Sobic004G332800--Sobic001G150300 Sobic001G225000 Sobic001G225000 Sobic004G332800--Sobic001G225000 Sobic001G401975 Sobic001G401975 Sobic004G332800--Sobic001G401975 Sobic005G062100 Sobic005G062100 Sobic004G332800--Sobic005G062100 Sobic005G194000 Sobic005G194000 Sobic004G332800--Sobic005G194000 Sobic003G415100 Sobic003G415100 Sobic008G169800--Sobic003G415100 Sobic001G123201 Sobic001G123201 Sobic008G169800--Sobic001G123201 Sobic010G207400 Sobic010G207400 Sobic008G169800--Sobic010G207400 Sobic005G003750 Sobic005G003750 Sobic008G169800--Sobic005G003750 Sobic006G261100 Sobic006G261100 Sobic008G169800--Sobic006G261100 Sobic004G133700 Sobic004G133700 Sobic008G169800--Sobic004G133700 Sobic007G209000 Sobic007G209000 Sobic008G169800--Sobic007G209000 Sobic002G403200 Sobic002G403200 Sobic008G169800--Sobic002G403200 Sobic004G345100 Sobic004G345100 Sobic008G169800--Sobic004G345100 Sobic002G123100--Sobic001G150300 Sobic004G354600 Sobic004G354600 Sobic002G123100--Sobic004G354600 Sobic007G167300 Sobic007G167300 Sobic002G123100--Sobic007G167300 Sobic002G123100--Sobic001G401975 Sobic001G394900 Sobic001G394900 Sobic002G123100--Sobic001G394900 Sobic003G101200 Sobic003G101200 Sobic002G123100--Sobic003G101200 Sobic003G331100 Sobic003G331100 Sobic002G123100--Sobic003G331100 Sobic001G359700 Sobic001G359700 Sobic002G123100--Sobic001G359700 Sobic001G324800 Sobic001G324800 Sobic002G123100--Sobic001G324800 Sobic010G108900 Sobic010G108900 Sobic001G218800--Sobic010G108900 Sobic003G004700 Sobic003G004700 Sobic001G218800--Sobic003G004700 Sobic010G176500 Sobic010G176500 Sobic001G218800--Sobic010G176500 Sobic003G123000 Sobic003G123000 Sobic001G218800--Sobic003G123000 Sobic010G000300 Sobic010G000300 Sobic001G218800--Sobic010G000300 Sobic001G380500 Sobic001G380500 Sobic001G218800--Sobic001G380500 Sobic006G087100 Sobic006G087100 Sobic001G218800--Sobic006G087100 Sobic006G233300 Sobic006G233300 Sobic001G218800--Sobic006G233300 Sobic009G108500 Sobic009G108500 Sobic001G218800--Sobic009G108500 Sobic010G088300 Sobic010G088300 Sobic003G031200--Sobic010G088300 Sobic004G242100 Sobic004G242100 Sobic003G031200--Sobic004G242100 Sobic002G359900 Sobic002G359900 Sobic003G031200--Sobic002G359900 Sobic008G111700 Sobic008G111700 Sobic003G031200--Sobic008G111700 Sobic003G031200--Sobic002G129200 Sobic002G044000 Sobic002G044000 Sobic003G031200--Sobic002G044000 Sobic003G043400 Sobic003G043400 Sobic003G031200--Sobic003G043400 Sobic001G402600 Sobic001G402600 Sobic003G031200--Sobic001G402600 Sobic001G285300 Sobic001G285300 Sobic003G031200--Sobic001G285300 Sobic005G030100 Sobic005G030100 Sobic009G030400--Sobic005G030100 Sobic009G002000 Sobic009G002000 Sobic009G030400--Sobic009G002000 Sobic001G067000 Sobic001G067000 Sobic009G030400--Sobic001G067000 Sobic003G161800 Sobic003G161800 Sobic009G030400--Sobic003G161800 Sobic008G160500 Sobic008G160500 Sobic009G030400--Sobic008G160500 Sobic002G390400 Sobic002G390400 Sobic009G030400--Sobic002G390400 Sobic010G141600 Sobic010G141600 Sobic009G030400--Sobic010G141600 Sobic006G061100 Sobic006G061100 Sobic009G030400--Sobic006G061100 Sobic009G055600 Sobic009G055600 Sobic009G030400--Sobic009G055600 Sobic006G179600 Sobic006G179600 Sobic003G159500--Sobic006G179600 Sobic003G159500--Sobic006G061100 Sobic003G159500--Sobic010G207400 Sobic009G132600 Sobic009G132600 Sobic003G159500--Sobic009G132600 Sobic010G071600 Sobic010G071600 Sobic003G159500--Sobic010G071600 Sobic010G273800 Sobic010G273800 Sobic003G159500--Sobic010G273800 Sobic007G042300 Sobic007G042300 Sobic003G159500--Sobic007G042300 Sobic003G159500--Sobic002G403200 Sobic003G159500--Sobic008G160500 Sobic001G178400 Sobic001G178400 Sobic008G118500--Sobic001G178400 Sobic008G118500--Sobic006G087100 Sobic009G102900 Sobic009G102900 Sobic008G118500--Sobic009G102900 Sobic008G118500--Sobic009G002000 Sobic010G220900 Sobic010G220900 Sobic008G118500--Sobic010G220900 Sobic001G469200 Sobic001G469200 Sobic008G118500--Sobic001G469200 Sobic001G291800 Sobic001G291800 Sobic008G118500--Sobic001G291800 Sobic009G258400 Sobic009G258400 Sobic008G118500--Sobic009G258400 Sobic001G346300 Sobic001G346300 Sobic008G118500--Sobic001G346300 Sobic002G129200--Sobic003G031200 Sobic002G129200--Sobic010G220900 Sobic002G129200--Sobic002G359900 Sobic006G011000 Sobic006G011000 Sobic002G129200--Sobic006G011000 Sobic003G436500 Sobic003G436500 Sobic002G129200--Sobic003G436500 Sobic001G382200 Sobic001G382200 Sobic002G129200--Sobic001G382200 Sobic004G010700 Sobic004G010700 Sobic002G129200--Sobic004G010700 Sobic002G083800 Sobic002G083800 Sobic002G129200--Sobic002G083800 Sobic009G201800 Sobic009G201800 Sobic002G129200--Sobic009G201800
Octagon: transcription factors


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