Gene annotation
Transcriptome id Sobic.004G201100.1
Synonym SbF3'H1, Sb04g024750, D501,flavonoid 3'-hydroxylase 1, CYP75B1, TT7
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
The B-phenyl ring of naringenin can be hydroxylated at the 3' positions to produce eriodictyol (PubMedID : 16943219)
cytochrome P450, putative, expressed
UniProt Q0Z7U9 , A0A194YQR9
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF104
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology K05280; flavonoid 3'-monooxygenase
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT5G07990 : Cytochrome P450 superfamily protein
RAP-DB (Rice) LOC_Os10g17260.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a052311 , Zm00025a037682 , Zm00025a014421 , Zm00025a014419 , Zm00025a021329 , Zm00025a031824 , Zm00025a022331
Brachypodium KQJ91155 , KQJ93467
Barley HORVU6Hr1G087250.1 , HORVU1Hr1G094880.8 , HORVU1Hr1G094880.9 , HORVU1Hr1G094880.7 , HORVU1Hr1G094880.4 , HORVU1Hr1G094880.5 , HORVU1Hr1G094880.2 , HORVU1Hr1G094880.1 , HORVU7Hr1G095900.47 , HORVU7Hr1G095900.50 , HORVU7Hr1G095900.52
Wheat TraesCS6B02G406400 , TraesCS6D02G353200 , TraesCS6B02G405900 , TraesCS7D02G404900 , TraesCS1D02G450100 , TraesCS7B02G310900 , TraesCS1A02G442300 , TraesCS2B02G613200 , TraesCS6A02G369700
Populus -


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cDNA sequences
Sobic.004G201100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G263900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
2 Sobic.002G085800 cytokinin-N-glucosyltransferase 1, putative, expressed -
3 Sobic.003G426200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.001G190500 dirigent, putative, expressed -
5 Sobic.006G100501 - -
6 Sobic.001G111300 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
7 Sobic.009G122300 white-brown complex homolog protein 16, putative, expressed -
8 Sobic.002G383900 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
9 Sobic.003G134600 expressed protein -
10 Sobic.003G269900 OsSub12 - Putative Subtilisin homologue, expressed -
11 Sobic.002G053900 Cupin domain containing protein, expressed -
12 Sobic.002G094600 "CESA6-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@"cellulose synthase A2, incorporate UDP-sugars into cellulose"(PubMedID : 28944535)@CESA6 - cellulose synthase, expressed K10999: cellulose synthase A
13 Sobic.008G133000 expressed protein -
14 Sobic.003G185300 dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
15 Sobic.004G351200 -(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
16 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.005G216700 plant protein of unknown function domain containing protein, expressed -
18 Sobic.003G349400 expressed protein -
19 Sobic.010G139100 serine/threonine-protein kinase, putative, expressed -
20 Sobic.010G158400 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic004G201100 Sobic004G201100 Sobic001G263900 Sobic001G263900 Sobic004G201100--Sobic001G263900 Sobic002G085800 Sobic002G085800 Sobic004G201100--Sobic002G085800 Sobic003G426200 Sobic003G426200 Sobic004G201100--Sobic003G426200 Sobic001G190500 Sobic001G190500 Sobic004G201100--Sobic001G190500 Sobic006G100501 Sobic006G100501 Sobic004G201100--Sobic006G100501 Sobic001G111300 Sobic001G111300 Sobic004G201100--Sobic001G111300 Sobic009G122300 Sobic009G122300 Sobic004G201100--Sobic009G122300 Sobic002G383900 Sobic002G383900 Sobic004G201100--Sobic002G383900 Sobic003G134600 Sobic003G134600 Sobic004G201100--Sobic003G134600 Sobic009G221900 Sobic009G221900 Sobic001G263900--Sobic009G221900 Sobic003G099166 Sobic003G099166 Sobic001G263900--Sobic003G099166 Sobic001G250100 Sobic001G250100 Sobic001G263900--Sobic001G250100 Sobic009G017500 Sobic009G017500 Sobic001G263900--Sobic009G017500 Sobic001G263900--Sobic002G383900 Sobic002G030800 Sobic002G030800 Sobic001G263900--Sobic002G030800 Sobic001G471800 Sobic001G471800 Sobic001G263900--Sobic001G471800 Sobic001G263900--Sobic002G085800 Sobic007G047300 Sobic007G047300 Sobic001G263900--Sobic007G047300 Sobic003G349400 Sobic003G349400 Sobic002G085800--Sobic003G349400 Sobic010G158400 Sobic010G158400 Sobic002G085800--Sobic010G158400 Sobic009G032900 Sobic009G032900 Sobic002G085800--Sobic009G032900 Sobic005G216700 Sobic005G216700 Sobic002G085800--Sobic005G216700 Sobic002G068000 Sobic002G068000 Sobic002G085800--Sobic002G068000 Sobic004G351200 Sobic004G351200 Sobic002G085800--Sobic004G351200 Sobic010G139100 Sobic010G139100 Sobic002G085800--Sobic010G139100 Sobic006G150100 Sobic006G150100 Sobic002G085800--Sobic006G150100 Sobic010G234500 Sobic010G234500 Sobic002G085800--Sobic010G234500 Sobic006G205700 Sobic006G205700 Sobic003G426200--Sobic006G205700 Sobic002G391400 Sobic002G391400 Sobic003G426200--Sobic002G391400 Sobic008G022100 Sobic008G022100 Sobic003G426200--Sobic008G022100 Sobic003G167300 Sobic003G167300 Sobic003G426200--Sobic003G167300 Sobic007G206800 Sobic007G206800 Sobic003G426200--Sobic007G206800 Sobic002G115600 Sobic002G115600 Sobic003G426200--Sobic002G115600 Sobic010G241900 Sobic010G241900 Sobic003G426200--Sobic010G241900 Sobic007G220400 Sobic007G220400 Sobic003G426200--Sobic007G220400 Sobic009G259800 Sobic009G259800 Sobic003G426200--Sobic009G259800 Sobic009G072800 Sobic009G072800 Sobic001G190500--Sobic009G072800 Sobic002G053900 Sobic002G053900 Sobic001G190500--Sobic002G053900 Sobic001G046800 Sobic001G046800 Sobic001G190500--Sobic001G046800 Sobic002G311501 Sobic002G311501 Sobic001G190500--Sobic002G311501 Sobic009G215000 Sobic009G215000 Sobic001G190500--Sobic009G215000 Sobic002G003700 Sobic002G003700 Sobic001G190500--Sobic002G003700 Sobic001G261460 Sobic001G261460 Sobic001G190500--Sobic001G261460 Sobic006G170600 Sobic006G170600 Sobic001G190500--Sobic006G170600 Sobic010G047600 Sobic010G047600 Sobic001G190500--Sobic010G047600 Sobic006G100501--Sobic006G150100 Sobic006G100501--Sobic002G003700 Sobic006G100501--Sobic004G351200 Sobic006G100501--Sobic003G349400 Sobic009G186500 Sobic009G186500 Sobic006G100501--Sobic009G186500 Sobic006G100501--Sobic002G085800 Sobic005G127400 Sobic005G127400 Sobic006G100501--Sobic005G127400 Sobic010G127800 Sobic010G127800 Sobic006G100501--Sobic010G127800 Sobic006G225500 Sobic006G225500 Sobic006G100501--Sobic006G225500 Sobic001G111300--Sobic010G139100 Sobic001G111300--Sobic004G351200 Sobic001G111300--Sobic005G216700 Sobic001G111300--Sobic002G003700 Sobic002G122400 Sobic002G122400 Sobic001G111300--Sobic002G122400 Sobic001G111300--Sobic006G150100 Sobic001G111300--Sobic009G032900 Sobic001G111300--Sobic010G158400 Sobic001G111300--Sobic003G349400 Sobic007G109600 Sobic007G109600 Sobic009G122300--Sobic007G109600 Sobic008G133000 Sobic008G133000 Sobic009G122300--Sobic008G133000 Sobic004G248500 Sobic004G248500 Sobic009G122300--Sobic004G248500 Sobic001G308100 Sobic001G308100 Sobic009G122300--Sobic001G308100 Sobic001G055400 Sobic001G055400 Sobic009G122300--Sobic001G055400 Sobic006G183900 Sobic006G183900 Sobic009G122300--Sobic006G183900 Sobic006G028400 Sobic006G028400 Sobic009G122300--Sobic006G028400 Sobic010G096400 Sobic010G096400 Sobic009G122300--Sobic010G096400 Sobic009G122300--Sobic001G263900 Sobic004G161900 Sobic004G161900 Sobic002G383900--Sobic004G161900 Sobic002G383900--Sobic001G263900 Sobic007G020700 Sobic007G020700 Sobic002G383900--Sobic007G020700 Sobic005G022500 Sobic005G022500 Sobic002G383900--Sobic005G022500 Sobic005G219700 Sobic005G219700 Sobic002G383900--Sobic005G219700 Sobic007G106500 Sobic007G106500 Sobic002G383900--Sobic007G106500 Sobic001G365200 Sobic001G365200 Sobic002G383900--Sobic001G365200 Sobic002G207000 Sobic002G207000 Sobic002G383900--Sobic002G207000 Sobic001G314000 Sobic001G314000 Sobic002G383900--Sobic001G314000 Sobic006G117600 Sobic006G117600 Sobic003G134600--Sobic006G117600 Sobic010G115000 Sobic010G115000 Sobic003G134600--Sobic010G115000 Sobic007G094100 Sobic007G094100 Sobic003G134600--Sobic007G094100 Sobic005G216500 Sobic005G216500 Sobic003G134600--Sobic005G216500 Sobic004G008600 Sobic004G008600 Sobic003G134600--Sobic004G008600 Sobic010G269000 Sobic010G269000 Sobic003G134600--Sobic010G269000 Sobic003G046700 Sobic003G046700 Sobic003G134600--Sobic003G046700 Sobic005G079100 Sobic005G079100 Sobic003G134600--Sobic005G079100 Sobic004G009300 Sobic004G009300 Sobic003G134600--Sobic004G009300
Octagon: transcription factors


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