Gene annotation
Transcriptome id Sobic.004G296900.1
Synonym ATERF-5, ERF5, ATERF5
Functional annotation AP2 domain containing protein, expressed
UniProt A0A194YS80
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF29
NCBI CDD -
KEGG Orthology K09286; EREBP-like factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G47230 : ethylene responsive element binding factor 5
RAP-DB (Rice) LOC_Os02g43820.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005317 , Zm00025a032190 , Zm00025a043851 , Zm00025a035951 , Zm00025a003372 , Zm00025a010335 , Zm00025a037299 , Zm00025a010338 , Zm00025a009134 , Zm00025a005425 , Zm00025a020894 , Zm00025a020895 , Zm00025a038708
Brachypodium KQJ83906 , KQJ83907 , KQK23628 , KQJ91651 , KQK00588 , KQK00586
Barley HORVU6Hr1G062430.1 , HORVU6Hr1G062380.3 , HORVU6Hr1G062380.2 , HORVU6Hr1G062380.1 , HORVU6Hr1G062380.5 , HORVU6Hr1G062380.4 , HORVU1Hr1G055710.1 , HORVU1Hr1G055710.3 , HORVU4Hr1G080300.1 , HORVU5Hr1G068450.1 , HORVU3Hr1G059250.2 , HORVU3Hr1G059250.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G203200 hypothetical protein -
2 Sobic.002G122800 expressed protein -
3 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
4 Sobic.003G029800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
5 Sobic.001G354400 O-methyltransferase, putative, expressed -
6 Sobic.002G261600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed K01188: beta-glucosidase
7 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
8 Sobic.004G188800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
9 Sobic.003G235400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPCME, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
10 Sobic.007G103666 - -
11 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
12 Sobic.005G043900 protein kinase domain containing protein, expressed -
13 Sobic.008G009200 SAG20, putative, expressed -
14 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
15 Sobic.001G316400 heavy metal-associated domain containing protein, expressed -
16 Sobic.002G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
17 Sobic.001G520400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@RING-H2 finger protein ATL2A, putative, expressed -
18 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
19 Sobic.002G075000 receptor kinase, putative, expressed -
20 Sobic.005G043600 coatomer subunit beta, putative, expressed K17302: COPB2, coatomer subunit beta'


Gene co-expression network
sample Sobic004G296900 Sobic004G296900 Sobic003G203200 Sobic003G203200 Sobic004G296900--Sobic003G203200 Sobic002G122800 Sobic002G122800 Sobic004G296900--Sobic002G122800 Sobic006G181300 Sobic006G181300 Sobic004G296900--Sobic006G181300 Sobic003G029800 Sobic003G029800 Sobic004G296900--Sobic003G029800 Sobic001G354400 Sobic001G354400 Sobic004G296900--Sobic001G354400 Sobic002G261600 Sobic002G261600 Sobic004G296900--Sobic002G261600 Sobic009G114000 Sobic009G114000 Sobic004G296900--Sobic009G114000 Sobic004G188800 Sobic004G188800 Sobic004G296900--Sobic004G188800 Sobic003G235400 Sobic003G235400 Sobic004G296900--Sobic003G235400 Sobic003G203200--Sobic002G122800 Sobic003G203200--Sobic001G354400 Sobic001G316400 Sobic001G316400 Sobic003G203200--Sobic001G316400 Sobic005G043900 Sobic005G043900 Sobic003G203200--Sobic005G043900 Sobic003G203200--Sobic009G114000 Sobic006G091700 Sobic006G091700 Sobic003G203200--Sobic006G091700 Sobic002G085300 Sobic002G085300 Sobic003G203200--Sobic002G085300 Sobic003G203200--Sobic006G181300 Sobic006G246600 Sobic006G246600 Sobic003G203200--Sobic006G246600 Sobic002G122800--Sobic009G114000 Sobic003G111200 Sobic003G111200 Sobic002G122800--Sobic003G111200 Sobic002G122800--Sobic003G203200 Sobic005G169400 Sobic005G169400 Sobic002G122800--Sobic005G169400 Sobic002G122800--Sobic001G316400 Sobic002G122800--Sobic001G354400 Sobic002G122800--Sobic006G181300 Sobic002G122800--Sobic006G091700 Sobic002G122800--Sobic002G085300 Sobic001G069900 Sobic001G069900 Sobic006G181300--Sobic001G069900 Sobic003G087200 Sobic003G087200 Sobic006G181300--Sobic003G087200 Sobic006G181300--Sobic009G114000 Sobic006G181300--Sobic006G091700 Sobic004G321800 Sobic004G321800 Sobic006G181300--Sobic004G321800 Sobic009G207600 Sobic009G207600 Sobic006G181300--Sobic009G207600 Sobic001G015500 Sobic001G015500 Sobic006G181300--Sobic001G015500 Sobic008G079300 Sobic008G079300 Sobic006G181300--Sobic008G079300 Sobic001G150600 Sobic001G150600 Sobic006G181300--Sobic001G150600 Sobic007G103666 Sobic007G103666 Sobic003G029800--Sobic007G103666 Sobic001G520400 Sobic001G520400 Sobic003G029800--Sobic001G520400 Sobic009G229800 Sobic009G229800 Sobic003G029800--Sobic009G229800 Sobic004G060900 Sobic004G060900 Sobic003G029800--Sobic004G060900 Sobic004G087500 Sobic004G087500 Sobic003G029800--Sobic004G087500 Sobic005G024700 Sobic005G024700 Sobic003G029800--Sobic005G024700 Sobic009G057300 Sobic009G057300 Sobic003G029800--Sobic009G057300 Sobic003G428400 Sobic003G428400 Sobic003G029800--Sobic003G428400 Sobic003G029800--Sobic004G188800 Sobic001G354400--Sobic003G203200 Sobic001G354400--Sobic002G122800 Sobic001G354400--Sobic001G316400 Sobic001G354400--Sobic006G181300 Sobic001G354400--Sobic006G246600 Sobic004G226100 Sobic004G226100 Sobic001G354400--Sobic004G226100 Sobic001G354400--Sobic005G169400 Sobic001G354400--Sobic009G114000 Sobic008G048900 Sobic008G048900 Sobic001G354400--Sobic008G048900 Sobic002G261600--Sobic003G235400 Sobic010G170000 Sobic010G170000 Sobic002G261600--Sobic010G170000 Sobic009G161900 Sobic009G161900 Sobic002G261600--Sobic009G161900 Sobic002G261600--Sobic004G296900 Sobic004G123400 Sobic004G123400 Sobic002G261600--Sobic004G123400 Sobic007G053100 Sobic007G053100 Sobic002G261600--Sobic007G053100 Sobic004G058600 Sobic004G058600 Sobic002G261600--Sobic004G058600 Sobic006G213400 Sobic006G213400 Sobic002G261600--Sobic006G213400 Sobic001G193500 Sobic001G193500 Sobic002G261600--Sobic001G193500 Sobic009G114000--Sobic006G091700 Sobic009G114000--Sobic003G087200 Sobic006G226400 Sobic006G226400 Sobic009G114000--Sobic006G226400 Sobic009G114000--Sobic006G181300 Sobic009G114000--Sobic002G085300 Sobic009G114000--Sobic001G150600 Sobic009G114000--Sobic001G069900 Sobic009G114000--Sobic002G122800 Sobic006G030700 Sobic006G030700 Sobic009G114000--Sobic006G030700 Sobic003G338300 Sobic003G338300 Sobic004G188800--Sobic003G338300 Sobic004G188800--Sobic003G029800 Sobic004G188800--Sobic003G235400 Sobic001G280000 Sobic001G280000 Sobic004G188800--Sobic001G280000 Sobic001G227800 Sobic001G227800 Sobic004G188800--Sobic001G227800 Sobic002G215700 Sobic002G215700 Sobic004G188800--Sobic002G215700 Sobic003G148800 Sobic003G148800 Sobic004G188800--Sobic003G148800 Sobic002G058500 Sobic002G058500 Sobic004G188800--Sobic002G058500 Sobic004G101900 Sobic004G101900 Sobic004G188800--Sobic004G101900 Sobic003G235400--Sobic002G261600 Sobic006G012000 Sobic006G012000 Sobic003G235400--Sobic006G012000 Sobic003G235400--Sobic007G053100 Sobic002G075000 Sobic002G075000 Sobic003G235400--Sobic002G075000 Sobic003G235400--Sobic004G188800 Sobic001G125400 Sobic001G125400 Sobic003G235400--Sobic001G125400 Sobic006G251500 Sobic006G251500 Sobic003G235400--Sobic006G251500 Sobic003G384600 Sobic003G384600 Sobic003G235400--Sobic003G384600 Sobic003G427300 Sobic003G427300 Sobic003G235400--Sobic003G427300
Octagon: transcription factors


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