Gene annotation
Transcriptome id Sobic.004G297000.13,Sobic.004G297000.16,Sobic.004G297000.5,Sobic.004G297000.15,Sobic.004G297000.6,Sobic.004G297000.12,Sobic.004G297000.14,Sobic.004G297000.7,Sobic.004G297000.3,Sobic.004G297000.17,Sobic.004G297000.8,Sobic.004G297000.9,Sobic.004G297000.1,Sobic.004G297000.11,Sobic.004G297000.4,Sobic.004G297000.10
Synonym Sb04g033100
Functional annotation expressed protein
UniProt A0A194YSE4 , A0A1Z5RPN4 , A0A1Z5RQ78 , A0A1Z5RPN0 , A0A109NDY7 , A0A1Z5RPX7 , A0A1Z5RQ51 , A0A1Z5RPU5
Pfam PF10561
Panther DB PTHR31296 PTHR31296:SF1
NCBI CDD KOG2800; Conserved developmentally regulated protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44850 : -
RAP-DB (Rice) LOC_Os02g43810.1 : expressed protein
MaizeGDB (Corn) Zm00025a032189
Brachypodium KQK00587
Barley -
Wheat TraesCS6D02G225600
Populus -


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cDNA sequences
Sobic.004G297000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G247400 PX domain containing protein, putative, expressed K17925: sorting nexin-13
2 Sobic.007G017800 OsFBX142 - F-box domain containing protein, expressed -
3 Sobic.003G143200 expressed protein -
4 Sobic.001G081000 nucleotide-binding protein-like, putative, expressed K03593: mrp, ATP-binding protein involved in chromosome partitioning
5 Sobic.009G245800 protein of unknown function DUF1296 domain containing protein, expressed -
6 Sobic.003G141500 CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
7 Sobic.002G275600 RFC1 - Putative clamp loader of PCNA, replication factor C subunit 1, expressed K10754: replication factor C subunit 1
8 Sobic.002G056701 - -
9 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
10 Sobic.001G311500 N-acetylglucosaminyl transferase component, putative, expressed K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
11 Sobic.008G014500 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
12 Sobic.001G376100 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@OsFBX72 - F-box domain containing protein, expressed -
13 Sobic.005G191900 transporter family protein, putative, expressed -
14 Sobic.002G310200 expressed protein -
15 Sobic.004G185800 expressed protein -
16 Sobic.008G162900 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
17 Sobic.002G103600 glycosyl transferase, group 1 domain containing protein, expressed K03857: PIGA, phosphatidylinositol N-acetylglucosaminyltransferase subunit A
18 Sobic.003G102400 expressed protein -
19 Sobic.001G441400 transcription factor, putative, expressed K09060: plant G-box-binding factor
20 Sobic.007G071200 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2


Gene co-expression network
sample Sobic004G297000 Sobic004G297000 Sobic009G247400 Sobic009G247400 Sobic004G297000--Sobic009G247400 Sobic007G017800 Sobic007G017800 Sobic004G297000--Sobic007G017800 Sobic003G143200 Sobic003G143200 Sobic004G297000--Sobic003G143200 Sobic001G081000 Sobic001G081000 Sobic004G297000--Sobic001G081000 Sobic009G245800 Sobic009G245800 Sobic004G297000--Sobic009G245800 Sobic003G141500 Sobic003G141500 Sobic004G297000--Sobic003G141500 Sobic002G275600 Sobic002G275600 Sobic004G297000--Sobic002G275600 Sobic002G056701 Sobic002G056701 Sobic004G297000--Sobic002G056701 Sobic001G493200 Sobic001G493200 Sobic004G297000--Sobic001G493200 Sobic001G311500 Sobic001G311500 Sobic009G247400--Sobic001G311500 Sobic010G279450 Sobic010G279450 Sobic009G247400--Sobic010G279450 Sobic009G260500 Sobic009G260500 Sobic009G247400--Sobic009G260500 Sobic004G009600 Sobic004G009600 Sobic009G247400--Sobic004G009600 Sobic001G214600 Sobic001G214600 Sobic009G247400--Sobic001G214600 Sobic001G363500 Sobic001G363500 Sobic009G247400--Sobic001G363500 Sobic001G219600 Sobic001G219600 Sobic009G247400--Sobic001G219600 Sobic002G317200 Sobic002G317200 Sobic009G247400--Sobic002G317200 Sobic004G314000 Sobic004G314000 Sobic009G247400--Sobic004G314000 Sobic001G405600 Sobic001G405600 Sobic007G017800--Sobic001G405600 Sobic002G103600 Sobic002G103600 Sobic007G017800--Sobic002G103600 Sobic007G017800--Sobic003G143200 Sobic004G185800 Sobic004G185800 Sobic007G017800--Sobic004G185800 Sobic010G034100 Sobic010G034100 Sobic007G017800--Sobic010G034100 Sobic008G162900 Sobic008G162900 Sobic007G017800--Sobic008G162900 Sobic009G177500 Sobic009G177500 Sobic007G017800--Sobic009G177500 Sobic006G234700 Sobic006G234700 Sobic007G017800--Sobic006G234700 Sobic008G063300 Sobic008G063300 Sobic007G017800--Sobic008G063300 Sobic004G092500 Sobic004G092500 Sobic003G143200--Sobic004G092500 Sobic003G143200--Sobic001G405600 Sobic003G143200--Sobic007G017800 Sobic002G347000 Sobic002G347000 Sobic003G143200--Sobic002G347000 Sobic007G132100 Sobic007G132100 Sobic003G143200--Sobic007G132100 Sobic003G443100 Sobic003G443100 Sobic003G143200--Sobic003G443100 Sobic005G138300 Sobic005G138300 Sobic003G143200--Sobic005G138300 Sobic007G125000 Sobic007G125000 Sobic003G143200--Sobic007G125000 Sobic002G260400 Sobic002G260400 Sobic003G143200--Sobic002G260400 Sobic004G018300 Sobic004G018300 Sobic001G081000--Sobic004G018300 Sobic003G221600 Sobic003G221600 Sobic001G081000--Sobic003G221600 Sobic008G131000 Sobic008G131000 Sobic001G081000--Sobic008G131000 Sobic001G081000--Sobic003G141500 Sobic008G014500 Sobic008G014500 Sobic001G081000--Sobic008G014500 Sobic003G258900 Sobic003G258900 Sobic001G081000--Sobic003G258900 Sobic008G083000 Sobic008G083000 Sobic001G081000--Sobic008G083000 Sobic007G220300 Sobic007G220300 Sobic001G081000--Sobic007G220300 Sobic009G145101 Sobic009G145101 Sobic001G081000--Sobic009G145101 Sobic010G053800 Sobic010G053800 Sobic009G245800--Sobic010G053800 Sobic003G404500 Sobic003G404500 Sobic009G245800--Sobic003G404500 Sobic004G072100 Sobic004G072100 Sobic009G245800--Sobic004G072100 Sobic008G047800 Sobic008G047800 Sobic009G245800--Sobic008G047800 Sobic006G208500 Sobic006G208500 Sobic009G245800--Sobic006G208500 Sobic006G195700 Sobic006G195700 Sobic009G245800--Sobic006G195700 Sobic002G310200 Sobic002G310200 Sobic009G245800--Sobic002G310200 Sobic004G135400 Sobic004G135400 Sobic009G245800--Sobic004G135400 Sobic009G245800--Sobic003G443100 Sobic003G141500--Sobic001G219600 Sobic003G141500--Sobic008G047800 Sobic009G050900 Sobic009G050900 Sobic003G141500--Sobic009G050900 Sobic003G141500--Sobic001G493200 Sobic002G143500 Sobic002G143500 Sobic003G141500--Sobic002G143500 Sobic003G141500--Sobic003G443100 Sobic009G126400 Sobic009G126400 Sobic003G141500--Sobic009G126400 Sobic001G071400 Sobic001G071400 Sobic003G141500--Sobic001G071400 Sobic006G200600 Sobic006G200600 Sobic003G141500--Sobic006G200600 Sobic005G160100 Sobic005G160100 Sobic002G275600--Sobic005G160100 Sobic002G275600--Sobic009G247400 Sobic002G275600--Sobic008G014500 Sobic002G275600--Sobic001G363500 Sobic002G275600--Sobic001G219600 Sobic001G441400 Sobic001G441400 Sobic002G275600--Sobic001G441400 Sobic002G397500 Sobic002G397500 Sobic002G275600--Sobic002G397500 Sobic003G006400 Sobic003G006400 Sobic002G275600--Sobic003G006400 Sobic010G209400 Sobic010G209400 Sobic002G275600--Sobic010G209400 Sobic010G245000 Sobic010G245000 Sobic002G056701--Sobic010G245000 Sobic002G056701--Sobic002G260400 Sobic007G218000 Sobic007G218000 Sobic002G056701--Sobic007G218000 Sobic002G056701--Sobic006G195700 Sobic002G056701--Sobic004G072100 Sobic008G149800 Sobic008G149800 Sobic002G056701--Sobic008G149800 Sobic008G173100 Sobic008G173100 Sobic002G056701--Sobic008G173100 Sobic001G515000 Sobic001G515000 Sobic002G056701--Sobic001G515000 Sobic002G056701--Sobic010G053800 Sobic009G084900 Sobic009G084900 Sobic001G493200--Sobic009G084900 Sobic003G266001 Sobic003G266001 Sobic001G493200--Sobic003G266001 Sobic010G059500 Sobic010G059500 Sobic001G493200--Sobic010G059500 Sobic001G433800 Sobic001G433800 Sobic001G493200--Sobic001G433800 Sobic001G493200--Sobic004G072100 Sobic004G096400 Sobic004G096400 Sobic001G493200--Sobic004G096400 Sobic001G493200--Sobic007G132100 Sobic006G077200 Sobic006G077200 Sobic001G493200--Sobic006G077200 Sobic003G408600 Sobic003G408600 Sobic001G493200--Sobic003G408600
Octagon: transcription factors


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