Gene annotation
Transcriptome id Sobic.005G110532.1
Synonym -
Functional annotation -
UniProt C6JS27 , A0A125QUI0
Pfam PF08263 PF00560
Panther DB PTHR27000 PTHR27000:SF209
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G17240 : receptor like protein 2
RAP-DB (Rice) LOC_Os02g06070.1 : phytosulfokine receptor precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
2 Sobic.006G030400 xa21, putative, expressed -
3 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -
4 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
5 Sobic.010G049000 expressed protein -
6 Sobic.001G003200 RNApolymerase sigma-subunit F(PubMedID : 26465154)@RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
7 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
8 Sobic.009G014100 OsFBX178 - F-box domain containing protein, expressed -
9 Sobic.003G014300 expressed protein -
10 Sobic.002G354600 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
11 Sobic.002G025700 lectin-like receptor kinase, putative, expressed -
12 Sobic.003G203300 stress regulated protein, putative, expressed -
13 Sobic.004G026500 expressed protein -
14 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
15 Sobic.006G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed -
16 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
17 Sobic.005G175500 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
18 Sobic.009G143500 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
19 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
20 Sobic.005G075100 rp3 protein, putative, expressed -


Gene co-expression network
sample Sobic005G110532 Sobic005G110532 Sobic004G300000 Sobic004G300000 Sobic005G110532--Sobic004G300000 Sobic006G030400 Sobic006G030400 Sobic005G110532--Sobic006G030400 Sobic010G197000 Sobic010G197000 Sobic005G110532--Sobic010G197000 Sobic002G173100 Sobic002G173100 Sobic005G110532--Sobic002G173100 Sobic010G049000 Sobic010G049000 Sobic005G110532--Sobic010G049000 Sobic001G003200 Sobic001G003200 Sobic005G110532--Sobic001G003200 Sobic003G108900 Sobic003G108900 Sobic005G110532--Sobic003G108900 Sobic009G014100 Sobic009G014100 Sobic005G110532--Sobic009G014100 Sobic003G014300 Sobic003G014300 Sobic005G110532--Sobic003G014300 Sobic010G035500 Sobic010G035500 Sobic004G300000--Sobic010G035500 Sobic002G025700 Sobic002G025700 Sobic004G300000--Sobic002G025700 Sobic006G193200 Sobic006G193200 Sobic004G300000--Sobic006G193200 Sobic006G214700 Sobic006G214700 Sobic004G300000--Sobic006G214700 Sobic004G300000--Sobic003G108900 Sobic004G300000--Sobic010G197000 Sobic004G165900 Sobic004G165900 Sobic004G300000--Sobic004G165900 Sobic004G300000--Sobic003G014300 Sobic002G354600 Sobic002G354600 Sobic004G300000--Sobic002G354600 Sobic004G026500 Sobic004G026500 Sobic006G030400--Sobic004G026500 Sobic008G081900 Sobic008G081900 Sobic006G030400--Sobic008G081900 Sobic007G169300 Sobic007G169300 Sobic006G030400--Sobic007G169300 Sobic006G030400--Sobic010G197000 Sobic006G030400--Sobic005G110532 Sobic003G190000 Sobic003G190000 Sobic006G030400--Sobic003G190000 Sobic003G203300 Sobic003G203300 Sobic006G030400--Sobic003G203300 Sobic001G219700 Sobic001G219700 Sobic006G030400--Sobic001G219700 Sobic005G075100 Sobic005G075100 Sobic006G030400--Sobic005G075100 Sobic010G197000--Sobic009G014100 Sobic010G197000--Sobic002G354600 Sobic005G138600 Sobic005G138600 Sobic010G197000--Sobic005G138600 Sobic010G197000--Sobic004G300000 Sobic010G109600 Sobic010G109600 Sobic010G197000--Sobic010G109600 Sobic010G197000--Sobic003G190000 Sobic002G331800 Sobic002G331800 Sobic010G197000--Sobic002G331800 Sobic010G197000--Sobic006G214700 Sobic008G172300 Sobic008G172300 Sobic010G197000--Sobic008G172300 Sobic003G190100 Sobic003G190100 Sobic002G173100--Sobic003G190100 Sobic002G173100--Sobic003G108900 Sobic002G173100--Sobic003G203300 Sobic001G060500 Sobic001G060500 Sobic002G173100--Sobic001G060500 Sobic002G173100--Sobic003G190000 Sobic002G173100--Sobic005G075100 Sobic004G271600 Sobic004G271600 Sobic002G173100--Sobic004G271600 Sobic005G179300 Sobic005G179300 Sobic002G173100--Sobic005G179300 Sobic002G173100--Sobic004G300000 Sobic010G049000--Sobic008G172300 Sobic010G049000--Sobic009G014100 Sobic007G150100 Sobic007G150100 Sobic010G049000--Sobic007G150100 Sobic010G049000--Sobic005G110532 Sobic001G465700 Sobic001G465700 Sobic010G049000--Sobic001G465700 Sobic008G039900 Sobic008G039900 Sobic010G049000--Sobic008G039900 Sobic010G049000--Sobic001G003200 Sobic010G049000--Sobic003G108900 Sobic006G219150 Sobic006G219150 Sobic010G049000--Sobic006G219150 Sobic009G056700 Sobic009G056700 Sobic001G003200--Sobic009G056700 Sobic007G053800 Sobic007G053800 Sobic001G003200--Sobic007G053800 Sobic004G121400 Sobic004G121400 Sobic001G003200--Sobic004G121400 Sobic001G003200--Sobic007G150100 Sobic006G188000 Sobic006G188000 Sobic001G003200--Sobic006G188000 Sobic003G398800 Sobic003G398800 Sobic001G003200--Sobic003G398800 Sobic001G048400 Sobic001G048400 Sobic001G003200--Sobic001G048400 Sobic003G431700 Sobic003G431700 Sobic001G003200--Sobic003G431700 Sobic001G504400 Sobic001G504400 Sobic001G003200--Sobic001G504400 Sobic003G108900--Sobic004G165900 Sobic004G252500 Sobic004G252500 Sobic003G108900--Sobic004G252500 Sobic004G300100 Sobic004G300100 Sobic003G108900--Sobic004G300100 Sobic010G231500 Sobic010G231500 Sobic003G108900--Sobic010G231500 Sobic003G108900--Sobic002G173100 Sobic003G108900--Sobic004G300000 Sobic003G108900--Sobic009G014100 Sobic003G108900--Sobic004G271600 Sobic004G207400 Sobic004G207400 Sobic003G108900--Sobic004G207400 Sobic009G014100--Sobic010G197000 Sobic009G014100--Sobic008G172300 Sobic002G073200 Sobic002G073200 Sobic009G014100--Sobic002G073200 Sobic009G014100--Sobic003G108900 Sobic009G014100--Sobic004G026500 Sobic009G014100--Sobic002G354600 Sobic004G333400 Sobic004G333400 Sobic009G014100--Sobic004G333400 Sobic009G014100--Sobic003G190000 Sobic002G168300 Sobic002G168300 Sobic009G014100--Sobic002G168300 Sobic006G258700 Sobic006G258700 Sobic003G014300--Sobic006G258700 Sobic004G298900 Sobic004G298900 Sobic003G014300--Sobic004G298900 Sobic010G269400 Sobic010G269400 Sobic003G014300--Sobic010G269400 Sobic003G014300--Sobic004G300000 Sobic003G037300 Sobic003G037300 Sobic003G014300--Sobic003G037300 Sobic001G512500 Sobic001G512500 Sobic003G014300--Sobic001G512500 Sobic005G175500 Sobic005G175500 Sobic003G014300--Sobic005G175500 Sobic003G014300--Sobic010G035500 Sobic004G151500 Sobic004G151500 Sobic003G014300--Sobic004G151500
Octagon: transcription factors


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