Gene annotation
Transcriptome id Sobic.005G192100.2,Sobic.005G192100.5,Sobic.005G192100.12,Sobic.005G192100.6,Sobic.005G192100.11,Sobic.005G192100.10,Sobic.005G192100.7,Sobic.005G192100.4,Sobic.005G192100.3,Sobic.005G192100.9,Sobic.005G192100.8
Synonym Sb05g024880
Functional annotation stripe rust resistance protein Yr10, putative, expressed
UniProt Q8LJX9 , Q8LJZ6 , C5Y6I7 , A0A1Z5RJD1
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF484
NCBI CDD KOG0617; Ras suppressor protein (contains leucine-rich repeats) KOG4658Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46530 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g37870.1,LOC_Os11g37880.1 : stripe rust resistance protein Yr10, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G001800 NB-ARC domain containing protein, expressed -
2 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
3 Sobic.004G198100 expressed protein -
4 Sobic.009G048300 transcription factor X1, putative, expressed -
5 Sobic.010G119300 expressed protein -
6 Sobic.001G455900 "qGL3-2/qLGY3(Ortholog in rice:Yu et al., 2018/Liu et al., 2018)"(PubMedID : 31659846)@determinacy of the spikelet meristem and determining the identity of lemmas and paleas(PubMedID : 15208396)@OsMADS1 - MADS-box family gene with MIKCc type-box, expressed -
7 Sobic.003G117200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed -
8 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
9 Sobic.002G255500 expressed protein -
10 Sobic.006G273600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.002G360600 expressed protein -
12 Sobic.010G247000 expressed protein -
13 Sobic.003G010700 plant-specific domain TIGR01568 family protein, expressed -
14 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
15 Sobic.002G338700 armadillo/beta-catenin repeat family protein, putative, expressed -
16 Sobic.001G071600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
17 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
18 Sobic.001G347201 - -
19 Sobic.003G102000 expressed protein -
20 Sobic.008G114900 rhoGAP domain containing protein, expressed -


Gene co-expression network
sample Sobic005G192100 Sobic005G192100 Sobic006G001800 Sobic006G001800 Sobic005G192100--Sobic006G001800 Sobic008G125700 Sobic008G125700 Sobic005G192100--Sobic008G125700 Sobic004G198100 Sobic004G198100 Sobic005G192100--Sobic004G198100 Sobic009G048300 Sobic009G048300 Sobic005G192100--Sobic009G048300 Sobic010G119300 Sobic010G119300 Sobic005G192100--Sobic010G119300 Sobic001G455900 Sobic001G455900 Sobic005G192100--Sobic001G455900 Sobic003G117200 Sobic003G117200 Sobic005G192100--Sobic003G117200 Sobic003G046400 Sobic003G046400 Sobic005G192100--Sobic003G046400 Sobic002G255500 Sobic002G255500 Sobic005G192100--Sobic002G255500 Sobic001G261484 Sobic001G261484 Sobic006G001800--Sobic001G261484 Sobic005G154300 Sobic005G154300 Sobic006G001800--Sobic005G154300 Sobic006G001800--Sobic005G192100 Sobic001G091100 Sobic001G091100 Sobic006G001800--Sobic001G091100 Sobic001G300600 Sobic001G300600 Sobic006G001800--Sobic001G300600 Sobic006G188800 Sobic006G188800 Sobic006G001800--Sobic006G188800 Sobic001G475200 Sobic001G475200 Sobic006G001800--Sobic001G475200 Sobic006G079900 Sobic006G079900 Sobic006G001800--Sobic006G079900 Sobic001G007300 Sobic001G007300 Sobic006G001800--Sobic001G007300 Sobic008G125700--Sobic010G119300 Sobic008G114900 Sobic008G114900 Sobic008G125700--Sobic008G114900 Sobic003G102000 Sobic003G102000 Sobic008G125700--Sobic003G102000 Sobic003G260700 Sobic003G260700 Sobic008G125700--Sobic003G260700 Sobic008G125700--Sobic004G198100 Sobic008G006800 Sobic008G006800 Sobic008G125700--Sobic008G006800 Sobic002G313000 Sobic002G313000 Sobic008G125700--Sobic002G313000 Sobic004G339500 Sobic004G339500 Sobic008G125700--Sobic004G339500 Sobic005G199700 Sobic005G199700 Sobic008G125700--Sobic005G199700 Sobic004G198100--Sobic003G260700 Sobic004G198100--Sobic010G119300 Sobic001G398400 Sobic001G398400 Sobic004G198100--Sobic001G398400 Sobic004G198100--Sobic008G125700 Sobic004G257600 Sobic004G257600 Sobic004G198100--Sobic004G257600 Sobic001G170800 Sobic001G170800 Sobic004G198100--Sobic001G170800 Sobic004G198100--Sobic004G339500 Sobic004G198100--Sobic002G313000 Sobic004G271300 Sobic004G271300 Sobic004G198100--Sobic004G271300 Sobic001G071600 Sobic001G071600 Sobic009G048300--Sobic001G071600 Sobic010G183800 Sobic010G183800 Sobic009G048300--Sobic010G183800 Sobic002G078900 Sobic002G078900 Sobic009G048300--Sobic002G078900 Sobic001G106500 Sobic001G106500 Sobic009G048300--Sobic001G106500 Sobic009G048300--Sobic003G046400 Sobic003G300000 Sobic003G300000 Sobic009G048300--Sobic003G300000 Sobic003G092300 Sobic003G092300 Sobic009G048300--Sobic003G092300 Sobic001G456000 Sobic001G456000 Sobic009G048300--Sobic001G456000 Sobic001G459400 Sobic001G459400 Sobic009G048300--Sobic001G459400 Sobic010G119300--Sobic008G125700 Sobic010G119300--Sobic008G006800 Sobic010G119300--Sobic003G260700 Sobic010G119300--Sobic004G198100 Sobic010G119300--Sobic003G102000 Sobic005G005700 Sobic005G005700 Sobic010G119300--Sobic005G005700 Sobic010G119300--Sobic004G339500 Sobic010G119300--Sobic008G114900 Sobic010G119300--Sobic001G398400 Sobic001G455900--Sobic003G046400 Sobic006G163300 Sobic006G163300 Sobic001G455900--Sobic006G163300 Sobic007G033700 Sobic007G033700 Sobic001G455900--Sobic007G033700 Sobic009G243000 Sobic009G243000 Sobic001G455900--Sobic009G243000 Sobic010G247000 Sobic010G247000 Sobic001G455900--Sobic010G247000 Sobic006G271600 Sobic006G271600 Sobic001G455900--Sobic006G271600 Sobic001G455900--Sobic001G071600 Sobic001G137600 Sobic001G137600 Sobic001G455900--Sobic001G137600 Sobic010G070900 Sobic010G070900 Sobic001G455900--Sobic010G070900 Sobic003G117200--Sobic006G271600 Sobic003G117200--Sobic002G078900 Sobic003G117200--Sobic010G183800 Sobic003G117200--Sobic003G046400 Sobic003G117200--Sobic003G300000 Sobic003G117200--Sobic001G071600 Sobic003G117200--Sobic009G243000 Sobic003G006000 Sobic003G006000 Sobic003G117200--Sobic003G006000 Sobic003G117200--Sobic009G048300 Sobic003G046400--Sobic001G455900 Sobic003G046400--Sobic001G071600 Sobic003G046400--Sobic007G033700 Sobic003G046400--Sobic001G106500 Sobic003G046400--Sobic006G271600 Sobic003G046400--Sobic010G183800 Sobic003G046400--Sobic006G163300 Sobic003G046400--Sobic010G070900 Sobic003G046400--Sobic009G048300 Sobic002G255500--Sobic001G170800 Sobic010G008900 Sobic010G008900 Sobic002G255500--Sobic010G008900 Sobic001G416000 Sobic001G416000 Sobic002G255500--Sobic001G416000 Sobic002G255500--Sobic004G257600 Sobic003G314900 Sobic003G314900 Sobic002G255500--Sobic003G314900 Sobic002G255500--Sobic001G398400 Sobic001G177900 Sobic001G177900 Sobic002G255500--Sobic001G177900 Sobic002G255500--Sobic003G260700 Sobic005G000500 Sobic005G000500 Sobic002G255500--Sobic005G000500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.