Gene annotation
Transcriptome id Sobic.005G196200.2
Synonym ATPLT5, PMT5, Sb05g025300, ATPMT5
Functional annotation transporter family protein, putative, expressed
UniProt A0A1Z5RKI5
Pfam PF00083
Panther DB PTHR23500 PTHR23500:SF17
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G18830 : polyol/monosaccharide transporter 5
RAP-DB (Rice) LOC_Os11g41850.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a029259 , Zm00025a029260 , Zm00025a029265 , Zm00025a029266
Brachypodium KQJ87608
Barley -
Wheat TraesCS7D02G422500 , TraesCS4B02G062900 , TraesCS4A02G251900 , TraesCS4D02G061900 , TraesCS7B02G330800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G217133 - K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
2 Sobic.002G217133 - K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
3 Sobic.002G217133 - K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
4 Sobic.005G130400 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
5 Sobic.006G036900 vignain precursor, putative, expressed -
6 Sobic.002G190500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
7 Sobic.008G028800 WRKY104, expressed -
8 Sobic.004G050200 Strongly up-regulated in leaf samples inoculated with S. reilianum f. sp. zeae but not S. reilianum f. sp. reilianum(PubMedID : 22670753)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@function as typical DFRs by accepting dihydroflavonol substrates(PubMedID : 20529887)@dihydroflavonol-4-reductase, putative, expressed K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase
9 Sobic.004G113300 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
10 Sobic.002G324000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@isocitrate lyase, putative, expressed K01637: E4.1.3.1, isocitrate lyase
11 Sobic.002G108900 transporter family protein, putative, expressed -
12 Sobic.007G053900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
13 Sobic.006G065500 - -
14 Sobic.004G230600 - -
15 Sobic.010G024700 expressed protein -
16 Sobic.003G139366 - -
17 Sobic.001G491800 expressed protein -
18 Sobic.007G213925 - -
19 Sobic.002G122200 - -
20 Sobic.007G128800 - -


Gene co-expression network
sample Sobic005G196200 Sobic005G196200 Sobic002G217133 Sobic002G217133 Sobic005G196200--Sobic002G217133 Sobic005G130400 Sobic005G130400 Sobic005G196200--Sobic005G130400 Sobic006G036900 Sobic006G036900 Sobic005G196200--Sobic006G036900 Sobic002G190500 Sobic002G190500 Sobic005G196200--Sobic002G190500 Sobic008G028800 Sobic008G028800 Sobic005G196200--Sobic008G028800 Sobic004G050200 Sobic004G050200 Sobic005G196200--Sobic004G050200 Sobic004G113300 Sobic004G113300 Sobic005G196200--Sobic004G113300 Sobic002G217133--Sobic002G217133 Sobic002G217133--Sobic005G130400 Sobic002G217133--Sobic006G036900 Sobic010G024700 Sobic010G024700 Sobic002G217133--Sobic010G024700 Sobic002G217133--Sobic004G113300 Sobic002G217133--Sobic002G190500 Sobic002G217133--Sobic005G196200 Sobic002G217133--Sobic004G050200 Sobic002G324000 Sobic002G324000 Sobic005G130400--Sobic002G324000 Sobic005G130400--Sobic002G190500 Sobic005G130400--Sobic004G113300 Sobic005G130400--Sobic004G050200 Sobic005G130400--Sobic002G217133 Sobic005G130400--Sobic006G036900 Sobic005G130400--Sobic008G028800 Sobic006G036900--Sobic004G050200 Sobic004G230600 Sobic004G230600 Sobic006G036900--Sobic004G230600 Sobic006G036900--Sobic004G113300 Sobic006G036900--Sobic002G190500 Sobic001G182500 Sobic001G182500 Sobic006G036900--Sobic001G182500 Sobic006G036900--Sobic002G217133 Sobic006G036900--Sobic005G130400 Sobic002G190500--Sobic002G324000 Sobic002G190500--Sobic004G113300 Sobic002G190500--Sobic005G130400 Sobic002G190500--Sobic004G050200 Sobic003G184900 Sobic003G184900 Sobic002G190500--Sobic003G184900 Sobic004G345800 Sobic004G345800 Sobic002G190500--Sobic004G345800 Sobic004G321800 Sobic004G321800 Sobic002G190500--Sobic004G321800 Sobic007G216201 Sobic007G216201 Sobic002G190500--Sobic007G216201 Sobic008G079300 Sobic008G079300 Sobic002G190500--Sobic008G079300 Sobic008G053900 Sobic008G053900 Sobic008G028800--Sobic008G053900 Sobic008G028800--Sobic005G130400 Sobic002G084600 Sobic002G084600 Sobic008G028800--Sobic002G084600 Sobic010G135900 Sobic010G135900 Sobic008G028800--Sobic010G135900 Sobic008G028800--Sobic002G190500 Sobic009G058200 Sobic009G058200 Sobic008G028800--Sobic009G058200 Sobic008G028800--Sobic006G036900 Sobic007G163901 Sobic007G163901 Sobic008G028800--Sobic007G163901 Sobic006G241100 Sobic006G241100 Sobic008G028800--Sobic006G241100 Sobic004G050200--Sobic004G113300 Sobic004G050200--Sobic001G182500 Sobic004G050200--Sobic003G184900 Sobic004G050200--Sobic006G036900 Sobic004G050200--Sobic002G324000 Sobic004G050200--Sobic002G190500 Sobic001G491800 Sobic001G491800 Sobic004G050200--Sobic001G491800 Sobic001G274800 Sobic001G274800 Sobic004G050200--Sobic001G274800 Sobic004G050200--Sobic008G079300 Sobic004G113300--Sobic002G324000 Sobic004G113300--Sobic002G190500 Sobic004G113300--Sobic004G050200 Sobic004G113300--Sobic003G184900 Sobic004G113300--Sobic008G079300 Sobic004G113300--Sobic005G130400 Sobic004G113300--Sobic001G274800 Sobic003G105800 Sobic003G105800 Sobic004G113300--Sobic003G105800 Sobic004G060900 Sobic004G060900 Sobic004G113300--Sobic004G060900
Octagon: transcription factors


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