Gene annotation
Transcriptome id Sobic.006G065500.1
Synonym
Functional annotation -
UniProt A0A1B6PKL5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G190500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
2 Sobic.003G174400 - -
3 Sobic.001G468100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G542150 - -
5 Sobic.004G130964 - -
6 Sobic.002G122200 - -
7 Sobic.002G324000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@isocitrate lyase, putative, expressed K01637: E4.1.3.1, isocitrate lyase
8 Sobic.005G149700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.005G133200 disease resistance RPP13-like protein 1, putative, expressed -
10 Sobic.003G338000 non-green plastid inner envelope membrane protein, putative, expressed -
11 Sobic.004G113300 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
12 Sobic.010G203200 protein kinase domain containing protein, expressed -
13 Sobic.001G176501 - -
14 Sobic.001G274800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
15 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
16 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
17 Sobic.002G058500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD-linked oxidoreductase protein, putative, expressed K18204: D-2-hydroxyglutarate dehydrogenase
18 Sobic.010G020800 aminotransferase, classes I and II, domain containing protein, expressed K14270: aminotransferase
19 Sobic.005G130400 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
20 Sobic.005G095660 - K04733: interleukin-1 receptor-associated kinase 4


Gene co-expression network
sample Sobic006G065500 Sobic006G065500 Sobic002G190500 Sobic002G190500 Sobic006G065500--Sobic002G190500 Sobic003G174400 Sobic003G174400 Sobic006G065500--Sobic003G174400 Sobic001G468100 Sobic001G468100 Sobic006G065500--Sobic001G468100 Sobic001G542150 Sobic001G542150 Sobic006G065500--Sobic001G542150 Sobic004G130964 Sobic004G130964 Sobic006G065500--Sobic004G130964 Sobic002G122200 Sobic002G122200 Sobic006G065500--Sobic002G122200 Sobic002G324000 Sobic002G324000 Sobic006G065500--Sobic002G324000 Sobic005G149700 Sobic005G149700 Sobic006G065500--Sobic005G149700 Sobic005G133200 Sobic005G133200 Sobic006G065500--Sobic005G133200 Sobic002G190500--Sobic002G324000 Sobic004G113300 Sobic004G113300 Sobic002G190500--Sobic004G113300 Sobic005G130400 Sobic005G130400 Sobic002G190500--Sobic005G130400 Sobic004G050200 Sobic004G050200 Sobic002G190500--Sobic004G050200 Sobic003G184900 Sobic003G184900 Sobic002G190500--Sobic003G184900 Sobic004G345800 Sobic004G345800 Sobic002G190500--Sobic004G345800 Sobic004G321800 Sobic004G321800 Sobic002G190500--Sobic004G321800 Sobic007G216201 Sobic007G216201 Sobic002G190500--Sobic007G216201 Sobic008G079300 Sobic008G079300 Sobic002G190500--Sobic008G079300 Sobic001G176501 Sobic001G176501 Sobic003G174400--Sobic001G176501 Sobic002G249300 Sobic002G249300 Sobic003G174400--Sobic002G249300 Sobic001G459600 Sobic001G459600 Sobic003G174400--Sobic001G459600 Sobic004G034600 Sobic004G034600 Sobic003G174400--Sobic004G034600 Sobic003G174400--Sobic005G149700 Sobic010G135900 Sobic010G135900 Sobic003G174400--Sobic010G135900 Sobic001G000501 Sobic001G000501 Sobic003G174400--Sobic001G000501 Sobic003G174301 Sobic003G174301 Sobic003G174400--Sobic003G174301 Sobic001G496100 Sobic001G496100 Sobic003G174400--Sobic001G496100 Sobic007G186200 Sobic007G186200 Sobic001G468100--Sobic007G186200 Sobic009G207600 Sobic009G207600 Sobic001G468100--Sobic009G207600 Sobic002G058500 Sobic002G058500 Sobic001G468100--Sobic002G058500 Sobic001G150600 Sobic001G150600 Sobic001G468100--Sobic001G150600 Sobic008G153400 Sobic008G153400 Sobic001G468100--Sobic008G153400 Sobic001G325200 Sobic001G325200 Sobic001G468100--Sobic001G325200 Sobic001G468100--Sobic004G321800 Sobic001G438600 Sobic001G438600 Sobic001G468100--Sobic001G438600 Sobic003G087200 Sobic003G087200 Sobic001G468100--Sobic003G087200 Sobic001G233300 Sobic001G233300 Sobic001G542150--Sobic001G233300 Sobic002G153200 Sobic002G153200 Sobic001G542150--Sobic002G153200 Sobic002G143766 Sobic002G143766 Sobic001G542150--Sobic002G143766 Sobic009G007200 Sobic009G007200 Sobic001G542150--Sobic009G007200 Sobic001G542150--Sobic001G176501 Sobic001G542150--Sobic003G174400 Sobic001G542150--Sobic002G249300 Sobic004G057500 Sobic004G057500 Sobic001G542150--Sobic004G057500 Sobic005G150400 Sobic005G150400 Sobic001G542150--Sobic005G150400 Sobic007G010700 Sobic007G010700 Sobic004G130964--Sobic007G010700 Sobic008G021400 Sobic008G021400 Sobic004G130964--Sobic008G021400 Sobic003G114400 Sobic003G114400 Sobic004G130964--Sobic003G114400 Sobic002G426300 Sobic002G426300 Sobic004G130964--Sobic002G426300 Sobic004G130964--Sobic001G542150 Sobic008G088872 Sobic008G088872 Sobic004G130964--Sobic008G088872 Sobic010G205600 Sobic010G205600 Sobic004G130964--Sobic010G205600 Sobic009G019800 Sobic009G019800 Sobic004G130964--Sobic009G019800 Sobic006G268600 Sobic006G268600 Sobic004G130964--Sobic006G268600 Sobic005G095660 Sobic005G095660 Sobic002G122200--Sobic005G095660 Sobic007G213925 Sobic007G213925 Sobic002G122200--Sobic007G213925 Sobic002G122200--Sobic003G174400 Sobic002G122200--Sobic005G150400 Sobic001G248200 Sobic001G248200 Sobic002G122200--Sobic001G248200 Sobic010G057633 Sobic010G057633 Sobic002G122200--Sobic010G057633 Sobic002G122200--Sobic002G249300 Sobic002G122200--Sobic002G190500 Sobic002G122200--Sobic001G542150 Sobic002G324000--Sobic002G190500 Sobic002G324000--Sobic004G113300 Sobic002G324000--Sobic003G184900 Sobic002G324000--Sobic005G130400 Sobic002G324000--Sobic004G321800 Sobic002G324000--Sobic004G050200 Sobic001G274800 Sobic001G274800 Sobic002G324000--Sobic001G274800 Sobic008G182700 Sobic008G182700 Sobic002G324000--Sobic008G182700 Sobic004G060900 Sobic004G060900 Sobic002G324000--Sobic004G060900 Sobic005G149700--Sobic004G034600 Sobic001G504900 Sobic001G504900 Sobic005G149700--Sobic001G504900 Sobic002G266000 Sobic002G266000 Sobic005G149700--Sobic002G266000 Sobic002G128200 Sobic002G128200 Sobic005G149700--Sobic002G128200 Sobic006G104600 Sobic006G104600 Sobic005G149700--Sobic006G104600 Sobic009G011600 Sobic009G011600 Sobic005G149700--Sobic009G011600 Sobic005G149700--Sobic009G207600 Sobic005G149700--Sobic003G174301 Sobic003G398100 Sobic003G398100 Sobic005G149700--Sobic003G398100 Sobic002G023300 Sobic002G023300 Sobic005G133200--Sobic002G023300 Sobic006G076800 Sobic006G076800 Sobic005G133200--Sobic006G076800 Sobic005G133200--Sobic008G079300 Sobic005G133200--Sobic001G274800 Sobic005G133200--Sobic004G050200 Sobic003G097100 Sobic003G097100 Sobic005G133200--Sobic003G097100 Sobic005G133200--Sobic004G345800 Sobic009G226600 Sobic009G226600 Sobic005G133200--Sobic009G226600 Sobic001G474500 Sobic001G474500 Sobic005G133200--Sobic001G474500
Octagon: transcription factors


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