Gene annotation
Transcriptome id Sobic.005G224900.1
Synonym CHIA, ATCHIA, Sb05g027380
Functional annotation glycosyl hydrolase, putative, expressed
UniProt C5Y8H0
Pfam PF00704
Panther DB PTHR11177 PTHR11177:SF171
NCBI CDD -
KEGG Orthology K01183; chitinase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G24090 : chitinase A
RAP-DB (Rice) LOC_Os07g43820.1 : glycosyl hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a045187
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G226800 enzyme relate to 3-deoxyanthocyanidine pathway P/tan gene(PubMedID : 26994288)@leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
2 Sobic.005G101500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dirigent, putative, expressed -
3 Sobic.001G400900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
4 Sobic.001G401000 pathogenesis-related Bet v I family protein, putative, expressed -
5 Sobic.001G401200 pathogenesis-related Bet v I family protein, putative, expressed -
6 Sobic.003G111100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pathogen-related protein, putative, expressed -
7 Sobic.010G162000 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.008G038000 expressed protein -
9 Sobic.001G094400 OsCML4 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin
10 Sobic.004G252400 ASC1-like protein 2 (Os)(PubMedID : 27208977)@ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
11 Sobic.002G258800 ribosomal protein L7Ae, putative, expressed K02936: RP-L7Ae, large subunit ribosomal protein L7Ae
12 Sobic.009G040900 sucrose phosphate phos- phatase(PubMedID : 26616172)@sucrose-phosphatase, putative, expressed -
13 Sobic.006G178500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed -
14 Sobic.004G245800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.004G152400 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
16 Sobic.005G137100 only inducible by pathogen inoculation(PubMedID : 20529887)@SbCHS1 to SbCHS7 (AF152548-AF152554) are highly conserved (at least 97.5% sequence identity at amino acid level) and closely related to the maize (Zea mays) C2 and Whp genes encoding CHS enzymes.(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
17 Sobic.008G123100 calmodulin binding protein, putative, expressed -
18 Sobic.010G182300 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
19 Sobic.006G159400 - -
20 Sobic.005G136300 chalcone synthase(PubMedID : 26317421)@only inducible by pathogen inoculation(PubMedID : 20529887)@SbCHS1 to SbCHS7 (AF152548-AF152554) are highly conserved (at least 97.5% sequence identity at amino acid level) and closely related to the maize (Zea mays) C2 and Whp genes encoding CHS enzymes.(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase


Gene co-expression network
sample Sobic005G224900 Sobic005G224900 Sobic006G226800 Sobic006G226800 Sobic005G224900--Sobic006G226800 Sobic005G101500 Sobic005G101500 Sobic005G224900--Sobic005G101500 Sobic001G400900 Sobic001G400900 Sobic005G224900--Sobic001G400900 Sobic001G401000 Sobic001G401000 Sobic005G224900--Sobic001G401000 Sobic001G401200 Sobic001G401200 Sobic005G224900--Sobic001G401200 Sobic003G111100 Sobic003G111100 Sobic005G224900--Sobic003G111100 Sobic010G162000 Sobic010G162000 Sobic005G224900--Sobic010G162000 Sobic008G038000 Sobic008G038000 Sobic005G224900--Sobic008G038000 Sobic001G094400 Sobic001G094400 Sobic005G224900--Sobic001G094400 Sobic005G126200 Sobic005G126200 Sobic006G226800--Sobic005G126200 Sobic005G136300 Sobic005G136300 Sobic006G226800--Sobic005G136300 Sobic002G000400 Sobic002G000400 Sobic006G226800--Sobic002G000400 Sobic006G226800--Sobic005G224900 Sobic005G131700 Sobic005G131700 Sobic006G226800--Sobic005G131700 Sobic003G031100 Sobic003G031100 Sobic006G226800--Sobic003G031100 Sobic003G216232 Sobic003G216232 Sobic006G226800--Sobic003G216232 Sobic009G041000 Sobic009G041000 Sobic006G226800--Sobic009G041000 Sobic001G409200 Sobic001G409200 Sobic006G226800--Sobic001G409200 Sobic002G255700 Sobic002G255700 Sobic005G101500--Sobic002G255700 Sobic006G039700 Sobic006G039700 Sobic005G101500--Sobic006G039700 Sobic001G401300 Sobic001G401300 Sobic005G101500--Sobic001G401300 Sobic005G101500--Sobic001G401200 Sobic009G055100 Sobic009G055100 Sobic005G101500--Sobic009G055100 Sobic009G040900 Sobic009G040900 Sobic005G101500--Sobic009G040900 Sobic008G191600 Sobic008G191600 Sobic005G101500--Sobic008G191600 Sobic006G159400 Sobic006G159400 Sobic005G101500--Sobic006G159400 Sobic005G101500--Sobic005G224900 Sobic003G156200 Sobic003G156200 Sobic001G400900--Sobic003G156200 Sobic002G415100 Sobic002G415100 Sobic001G400900--Sobic002G415100 Sobic001G400900--Sobic001G401000 Sobic002G203700 Sobic002G203700 Sobic001G400900--Sobic002G203700 Sobic005G183100 Sobic005G183100 Sobic001G400900--Sobic005G183100 Sobic003G417700 Sobic003G417700 Sobic001G400900--Sobic003G417700 Sobic004G313100 Sobic004G313100 Sobic001G400900--Sobic004G313100 Sobic010G239300 Sobic010G239300 Sobic001G400900--Sobic010G239300 Sobic003G280200 Sobic003G280200 Sobic001G400900--Sobic003G280200 Sobic005G224000 Sobic005G224000 Sobic001G401000--Sobic005G224000 Sobic005G110454 Sobic005G110454 Sobic001G401000--Sobic005G110454 Sobic005G110451 Sobic005G110451 Sobic001G401000--Sobic005G110451 Sobic001G195300 Sobic001G195300 Sobic001G401000--Sobic001G195300 Sobic008G164201 Sobic008G164201 Sobic001G401000--Sobic008G164201 Sobic001G401000--Sobic001G400900 Sobic005G071100 Sobic005G071100 Sobic001G401000--Sobic005G071100 Sobic001G401000--Sobic003G417700 Sobic001G401000--Sobic003G156200 Sobic001G400700 Sobic001G400700 Sobic001G401200--Sobic001G400700 Sobic001G401200--Sobic001G401300 Sobic001G400800 Sobic001G400800 Sobic001G401200--Sobic001G400800 Sobic004G245800 Sobic004G245800 Sobic001G401200--Sobic004G245800 Sobic009G043600 Sobic009G043600 Sobic001G401200--Sobic009G043600 Sobic006G106800 Sobic006G106800 Sobic001G401200--Sobic006G106800 Sobic002G353900 Sobic002G353900 Sobic001G401200--Sobic002G353900 Sobic001G401100 Sobic001G401100 Sobic001G401200--Sobic001G401100 Sobic002G367400 Sobic002G367400 Sobic001G401200--Sobic002G367400 Sobic003G228200 Sobic003G228200 Sobic003G111100--Sobic003G228200 Sobic001G119500 Sobic001G119500 Sobic003G111100--Sobic001G119500 Sobic007G115500 Sobic007G115500 Sobic003G111100--Sobic007G115500 Sobic009G065300 Sobic009G065300 Sobic003G111100--Sobic009G065300 Sobic002G361200 Sobic002G361200 Sobic003G111100--Sobic002G361200 Sobic002G109400 Sobic002G109400 Sobic003G111100--Sobic002G109400 Sobic010G192900 Sobic010G192900 Sobic003G111100--Sobic010G192900 Sobic002G024000 Sobic002G024000 Sobic003G111100--Sobic002G024000 Sobic002G327100 Sobic002G327100 Sobic003G111100--Sobic002G327100 Sobic001G318500 Sobic001G318500 Sobic010G162000--Sobic001G318500 Sobic006G154500 Sobic006G154500 Sobic010G162000--Sobic006G154500 Sobic002G302500 Sobic002G302500 Sobic010G162000--Sobic002G302500 Sobic009G111000 Sobic009G111000 Sobic010G162000--Sobic009G111000 Sobic010G162000--Sobic001G401100 Sobic010G162000--Sobic003G228200 Sobic006G158400 Sobic006G158400 Sobic010G162000--Sobic006G158400 Sobic005G177600 Sobic005G177600 Sobic010G162000--Sobic005G177600 Sobic003G426400 Sobic003G426400 Sobic010G162000--Sobic003G426400 Sobic004G152400 Sobic004G152400 Sobic008G038000--Sobic004G152400 Sobic009G038300 Sobic009G038300 Sobic008G038000--Sobic009G038300 Sobic009G069700 Sobic009G069700 Sobic008G038000--Sobic009G069700 Sobic002G258800 Sobic002G258800 Sobic008G038000--Sobic002G258800 Sobic003G299800 Sobic003G299800 Sobic008G038000--Sobic003G299800 Sobic010G041700 Sobic010G041700 Sobic008G038000--Sobic010G041700 Sobic006G211400 Sobic006G211400 Sobic008G038000--Sobic006G211400 Sobic008G038000--Sobic001G094400 Sobic004G152700 Sobic004G152700 Sobic008G038000--Sobic004G152700 Sobic002G180600 Sobic002G180600 Sobic001G094400--Sobic002G180600 Sobic003G429300 Sobic003G429300 Sobic001G094400--Sobic003G429300 Sobic002G261800 Sobic002G261800 Sobic001G094400--Sobic002G261800 Sobic010G228000 Sobic010G228000 Sobic001G094400--Sobic010G228000 Sobic001G206400 Sobic001G206400 Sobic001G094400--Sobic001G206400 Sobic004G325700 Sobic004G325700 Sobic001G094400--Sobic004G325700 Sobic001G064800 Sobic001G064800 Sobic001G094400--Sobic001G064800 Sobic007G171000 Sobic007G171000 Sobic001G094400--Sobic007G171000 Sobic006G062800 Sobic006G062800 Sobic001G094400--Sobic006G062800
Octagon: transcription factors


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