Gene annotation
Transcriptome id Sobic.008G123100.1
Synonym Sb08g017560
Functional annotation calmodulin binding protein, putative, expressed
UniProt C5YPJ9
Pfam PF07887
Panther DB PTHR31713 PTHR31713:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress GO:0005516calmodulin binding


Orthologs (automatic annotation)
TAIR AT5G57580 : Calmodulin-binding protein
RAP-DB (Rice) LOC_Os12g36110.1 : calmodulin binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a054333
Brachypodium KQJ86419 , PNT62572 , PNT62573
Barley HORVU5Hr1G024400.9 , HORVU5Hr1G024400.8 , HORVU5Hr1G024400.1 , HORVU5Hr1G024400.3 , HORVU5Hr1G024400.2 , HORVU5Hr1G024400.5 , HORVU5Hr1G024400.4 , HORVU5Hr1G024400.7 , HORVU5Hr1G024400.6 , HORVU5Hr1G024400.19 , HORVU5Hr1G024400.18 , HORVU5Hr1G024400.15 , HORVU5Hr1G024400.14 , HORVU5Hr1G024400.17 , HORVU5Hr1G024400.16 , HORVU5Hr1G024400.13 , HORVU5Hr1G024400.12
Wheat TraesCS5A02G092800 , TraesCS5D02G105100 , TraesCS5B02G098900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G255700 alcohol dehydrogenase GroES-like domain containing protein, expressed -
2 Sobic.010G172800 down-regulated TF in developmental senescence(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.001G314700 uncharacterized Cys-rich domain containing protein, putative, expressed -
4 Sobic.009G059700 thioredoxin, putative, expressed K03671: thioredoxin 1
5 Sobic.003G216232 - -
6 Sobic.006G152400 OsWAK111 - OsWAK receptor-like protein kinase, expressed -
7 Sobic.002G122700 expressed protein -
8 Sobic.003G031100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.001G434900 serine palmitoyltransferase 1, putative, expressed K00654: serine palmitoyltransferase
10 Sobic.005G101500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@dirigent, putative, expressed -
11 Sobic.009G195300 DUF803 domain containing, putative, expressed -
12 Sobic.006G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
13 Sobic.009G044400 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
14 Sobic.003G035801 - -
15 Sobic.006G114200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@heavy metal associated domain containing protein, expressed -
16 Sobic.006G025300 white-brown complex homolog protein, putative, expressed -
17 Sobic.005G224900 glycosyl hydrolase, putative, expressed K01183: chitinase
18 Sobic.004G182300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MLO domain containing protein, putative, expressed K08472: mlo protein
19 Sobic.006G055400 hydroxyproline-rich glycoprotein family protein, putative, expressed -
20 Sobic.001G074200 LRR receptor-like protein kinase, putative, expressed -


Gene co-expression network
sample Sobic008G123100 Sobic008G123100 Sobic002G255700 Sobic002G255700 Sobic008G123100--Sobic002G255700 Sobic010G172800 Sobic010G172800 Sobic008G123100--Sobic010G172800 Sobic001G314700 Sobic001G314700 Sobic008G123100--Sobic001G314700 Sobic009G059700 Sobic009G059700 Sobic008G123100--Sobic009G059700 Sobic003G216232 Sobic003G216232 Sobic008G123100--Sobic003G216232 Sobic006G152400 Sobic006G152400 Sobic008G123100--Sobic006G152400 Sobic002G122700 Sobic002G122700 Sobic008G123100--Sobic002G122700 Sobic003G031100 Sobic003G031100 Sobic008G123100--Sobic003G031100 Sobic001G434900 Sobic001G434900 Sobic008G123100--Sobic001G434900 Sobic005G101500 Sobic005G101500 Sobic002G255700--Sobic005G101500 Sobic004G252400 Sobic004G252400 Sobic002G255700--Sobic004G252400 Sobic006G039700 Sobic006G039700 Sobic002G255700--Sobic006G039700 Sobic003G436800 Sobic003G436800 Sobic002G255700--Sobic003G436800 Sobic001G243500 Sobic001G243500 Sobic002G255700--Sobic001G243500 Sobic009G055100 Sobic009G055100 Sobic002G255700--Sobic009G055100 Sobic009G040900 Sobic009G040900 Sobic002G255700--Sobic009G040900 Sobic001G243400 Sobic001G243400 Sobic002G255700--Sobic001G243400 Sobic002G255700--Sobic008G123100 Sobic005G126100 Sobic005G126100 Sobic010G172800--Sobic005G126100 Sobic002G065500 Sobic002G065500 Sobic010G172800--Sobic002G065500 Sobic008G182400 Sobic008G182400 Sobic010G172800--Sobic008G182400 Sobic002G065600 Sobic002G065600 Sobic010G172800--Sobic002G065600 Sobic010G231000 Sobic010G231000 Sobic010G172800--Sobic010G231000 Sobic001G099400 Sobic001G099400 Sobic010G172800--Sobic001G099400 Sobic002G065800 Sobic002G065800 Sobic010G172800--Sobic002G065800 Sobic003G035801 Sobic003G035801 Sobic010G172800--Sobic003G035801 Sobic006G117400 Sobic006G117400 Sobic010G172800--Sobic006G117400 Sobic007G145700 Sobic007G145700 Sobic001G314700--Sobic007G145700 Sobic004G025000 Sobic004G025000 Sobic001G314700--Sobic004G025000 Sobic001G081600 Sobic001G081600 Sobic001G314700--Sobic001G081600 Sobic006G146500 Sobic006G146500 Sobic001G314700--Sobic006G146500 Sobic001G462800 Sobic001G462800 Sobic001G314700--Sobic001G462800 Sobic003G341100 Sobic003G341100 Sobic001G314700--Sobic003G341100 Sobic002G294600 Sobic002G294600 Sobic001G314700--Sobic002G294600 Sobic003G352400 Sobic003G352400 Sobic001G314700--Sobic003G352400 Sobic002G118600 Sobic002G118600 Sobic001G314700--Sobic002G118600 Sobic001G162100 Sobic001G162100 Sobic009G059700--Sobic001G162100 Sobic008G016900 Sobic008G016900 Sobic009G059700--Sobic008G016900 Sobic001G283500 Sobic001G283500 Sobic009G059700--Sobic001G283500 Sobic006G225600 Sobic006G225600 Sobic009G059700--Sobic006G225600 Sobic002G330300 Sobic002G330300 Sobic009G059700--Sobic002G330300 Sobic002G368400 Sobic002G368400 Sobic009G059700--Sobic002G368400 Sobic002G119800 Sobic002G119800 Sobic009G059700--Sobic002G119800 Sobic009G134600 Sobic009G134600 Sobic009G059700--Sobic009G134600 Sobic010G062800 Sobic010G062800 Sobic009G059700--Sobic010G062800 Sobic003G348400 Sobic003G348400 Sobic003G216232--Sobic003G348400 Sobic001G074200 Sobic001G074200 Sobic003G216232--Sobic001G074200 Sobic007G125900 Sobic007G125900 Sobic003G216232--Sobic007G125900 Sobic003G338400 Sobic003G338400 Sobic003G216232--Sobic003G338400 Sobic005G117400 Sobic005G117400 Sobic003G216232--Sobic005G117400 Sobic008G189200 Sobic008G189200 Sobic003G216232--Sobic008G189200 Sobic005G217200 Sobic005G217200 Sobic003G216232--Sobic005G217200 Sobic005G136300 Sobic005G136300 Sobic003G216232--Sobic005G136300 Sobic001G151800 Sobic001G151800 Sobic003G216232--Sobic001G151800 Sobic007G064250 Sobic007G064250 Sobic006G152400--Sobic007G064250 Sobic006G152400--Sobic003G035801 Sobic005G131400 Sobic005G131400 Sobic006G152400--Sobic005G131400 Sobic008G052500 Sobic008G052500 Sobic006G152400--Sobic008G052500 Sobic006G181400 Sobic006G181400 Sobic006G152400--Sobic006G181400 Sobic009G068900 Sobic009G068900 Sobic006G152400--Sobic009G068900 Sobic006G152400--Sobic008G123100 Sobic008G106400 Sobic008G106400 Sobic006G152400--Sobic008G106400 Sobic006G167900 Sobic006G167900 Sobic006G152400--Sobic006G167900 Sobic004G234900 Sobic004G234900 Sobic002G122700--Sobic004G234900 Sobic002G122700--Sobic006G225600 Sobic002G122700--Sobic001G434900 Sobic010G101500 Sobic010G101500 Sobic002G122700--Sobic010G101500 Sobic001G220400 Sobic001G220400 Sobic002G122700--Sobic001G220400 Sobic001G329100 Sobic001G329100 Sobic002G122700--Sobic001G329100 Sobic010G000900 Sobic010G000900 Sobic002G122700--Sobic010G000900 Sobic010G188100 Sobic010G188100 Sobic002G122700--Sobic010G188100 Sobic003G248600 Sobic003G248600 Sobic002G122700--Sobic003G248600 Sobic001G018400 Sobic001G018400 Sobic003G031100--Sobic001G018400 Sobic005G126200 Sobic005G126200 Sobic003G031100--Sobic005G126200 Sobic005G171100 Sobic005G171100 Sobic003G031100--Sobic005G171100 Sobic007G074400 Sobic007G074400 Sobic003G031100--Sobic007G074400 Sobic002G024400 Sobic002G024400 Sobic003G031100--Sobic002G024400 Sobic009G073500 Sobic009G073500 Sobic003G031100--Sobic009G073500 Sobic007G058900 Sobic007G058900 Sobic003G031100--Sobic007G058900 Sobic005G131700 Sobic005G131700 Sobic003G031100--Sobic005G131700 Sobic008G146700 Sobic008G146700 Sobic003G031100--Sobic008G146700 Sobic001G434900--Sobic002G122700 Sobic004G350300 Sobic004G350300 Sobic001G434900--Sobic004G350300 Sobic003G002400 Sobic003G002400 Sobic001G434900--Sobic003G002400 Sobic003G367300 Sobic003G367300 Sobic001G434900--Sobic003G367300 Sobic001G434900--Sobic006G225600 Sobic005G176000 Sobic005G176000 Sobic001G434900--Sobic005G176000 Sobic001G434900--Sobic003G248600 Sobic001G434900--Sobic001G162100 Sobic004G274400 Sobic004G274400 Sobic001G434900--Sobic004G274400
Octagon: transcription factors


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