Gene annotation
Transcriptome id Sobic.008G038000.1
Synonym Sb08g003270
Functional annotation expressed protein
UniProt C5YRT2
Pfam -
Panther DB PTHR33148 PTHR33148:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G10120 : -
RAP-DB (Rice) LOC_Os11g05490.1 : expressed protein
MaizeGDB (Corn) Zm00025a013010 , Zm00025a033495
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G152400 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
2 Sobic.009G038300 expressed protein -
3 Sobic.009G069700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Transcriptional repressor(PubMedID : 30367619)@OsIAA16 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
4 Sobic.002G258800 ribosomal protein L7Ae, putative, expressed K02936: RP-L7Ae, large subunit ribosomal protein L7Ae
5 Sobic.003G299800 RING-H2 finger protein, putative, expressed K19038: E3 ubiquitin-protein ligase ATL41
6 Sobic.010G041700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
7 Sobic.006G211400 Terpenoid cyclases/Protein prenyltransferases superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@terpene synthase, putative, expressed K15793: acyclic sesquiterpene synthase
8 Sobic.001G094400 OsCML4 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin
9 Sobic.004G152700 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
10 Sobic.010G183500 expressed protein -
11 Sobic.006G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
12 Sobic.007G080840 - -
13 Sobic.005G092800 expressed protein -
14 Sobic.009G044400 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
15 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
16 Sobic.007G011000 synaptobrevin-related family protein, putative, expressed -
17 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
18 Sobic.002G119800 arginyl-tRNA synthetase, putative, expressed -
19 Sobic.003G107600 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
20 Sobic.006G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -


Gene co-expression network
sample Sobic008G038000 Sobic008G038000 Sobic004G152400 Sobic004G152400 Sobic008G038000--Sobic004G152400 Sobic009G038300 Sobic009G038300 Sobic008G038000--Sobic009G038300 Sobic009G069700 Sobic009G069700 Sobic008G038000--Sobic009G069700 Sobic002G258800 Sobic002G258800 Sobic008G038000--Sobic002G258800 Sobic003G299800 Sobic003G299800 Sobic008G038000--Sobic003G299800 Sobic010G041700 Sobic010G041700 Sobic008G038000--Sobic010G041700 Sobic006G211400 Sobic006G211400 Sobic008G038000--Sobic006G211400 Sobic001G094400 Sobic001G094400 Sobic008G038000--Sobic001G094400 Sobic004G152700 Sobic004G152700 Sobic008G038000--Sobic004G152700 Sobic004G152400--Sobic002G258800 Sobic004G152400--Sobic004G152700 Sobic002G259000 Sobic002G259000 Sobic004G152400--Sobic002G259000 Sobic010G182300 Sobic010G182300 Sobic004G152400--Sobic010G182300 Sobic004G103800 Sobic004G103800 Sobic004G152400--Sobic004G103800 Sobic003G107600 Sobic003G107600 Sobic004G152400--Sobic003G107600 Sobic001G505100 Sobic001G505100 Sobic004G152400--Sobic001G505100 Sobic010G029400 Sobic010G029400 Sobic004G152400--Sobic010G029400 Sobic010G259900 Sobic010G259900 Sobic004G152400--Sobic010G259900 Sobic009G038300--Sobic008G038000 Sobic009G038300--Sobic003G299800 Sobic009G038300--Sobic004G152400 Sobic002G214800 Sobic002G214800 Sobic009G038300--Sobic002G214800 Sobic002G066400 Sobic002G066400 Sobic009G038300--Sobic002G066400 Sobic001G234300 Sobic001G234300 Sobic009G038300--Sobic001G234300 Sobic002G022400 Sobic002G022400 Sobic009G038300--Sobic002G022400 Sobic009G038300--Sobic004G152700 Sobic006G159300 Sobic006G159300 Sobic009G038300--Sobic006G159300 Sobic003G158500 Sobic003G158500 Sobic009G069700--Sobic003G158500 Sobic008G139600 Sobic008G139600 Sobic009G069700--Sobic008G139600 Sobic001G247300 Sobic001G247300 Sobic009G069700--Sobic001G247300 Sobic004G169300 Sobic004G169300 Sobic009G069700--Sobic004G169300 Sobic003G360000 Sobic003G360000 Sobic009G069700--Sobic003G360000 Sobic010G036800 Sobic010G036800 Sobic009G069700--Sobic010G036800 Sobic003G264500 Sobic003G264500 Sobic009G069700--Sobic003G264500 Sobic001G407800 Sobic001G407800 Sobic009G069700--Sobic001G407800 Sobic007G151100 Sobic007G151100 Sobic009G069700--Sobic007G151100 Sobic002G258800--Sobic010G182300 Sobic002G258800--Sobic002G259000 Sobic002G258800--Sobic004G152700 Sobic002G258800--Sobic004G152400 Sobic001G046300 Sobic001G046300 Sobic002G258800--Sobic001G046300 Sobic002G258800--Sobic004G103800 Sobic002G258800--Sobic010G259900 Sobic003G321700 Sobic003G321700 Sobic002G258800--Sobic003G321700 Sobic009G065400 Sobic009G065400 Sobic002G258800--Sobic009G065400 Sobic001G225600 Sobic001G225600 Sobic003G299800--Sobic001G225600 Sobic004G352900 Sobic004G352900 Sobic003G299800--Sobic004G352900 Sobic002G427900 Sobic002G427900 Sobic003G299800--Sobic002G427900 Sobic001G530350 Sobic001G530350 Sobic003G299800--Sobic001G530350 Sobic001G285000 Sobic001G285000 Sobic003G299800--Sobic001G285000 Sobic001G410100 Sobic001G410100 Sobic003G299800--Sobic001G410100 Sobic009G249000 Sobic009G249000 Sobic003G299800--Sobic009G249000 Sobic009G100800 Sobic009G100800 Sobic003G299800--Sobic009G100800 Sobic001G526900 Sobic001G526900 Sobic003G299800--Sobic001G526900 Sobic009G046600 Sobic009G046600 Sobic010G041700--Sobic009G046600 Sobic005G010200 Sobic005G010200 Sobic010G041700--Sobic005G010200 Sobic006G089300 Sobic006G089300 Sobic010G041700--Sobic006G089300 Sobic010G041700--Sobic007G151100 Sobic002G374100 Sobic002G374100 Sobic010G041700--Sobic002G374100 Sobic009G066800 Sobic009G066800 Sobic010G041700--Sobic009G066800 Sobic009G129000 Sobic009G129000 Sobic010G041700--Sobic009G129000 Sobic001G483400 Sobic001G483400 Sobic010G041700--Sobic001G483400 Sobic002G272900 Sobic002G272900 Sobic010G041700--Sobic002G272900 Sobic005G111400 Sobic005G111400 Sobic006G211400--Sobic005G111400 Sobic009G197600 Sobic009G197600 Sobic006G211400--Sobic009G197600 Sobic007G057100 Sobic007G057100 Sobic006G211400--Sobic007G057100 Sobic004G051166 Sobic004G051166 Sobic006G211400--Sobic004G051166 Sobic001G489600 Sobic001G489600 Sobic006G211400--Sobic001G489600 Sobic004G280900 Sobic004G280900 Sobic006G211400--Sobic004G280900 Sobic006G101100 Sobic006G101100 Sobic006G211400--Sobic006G101100 Sobic008G036000 Sobic008G036000 Sobic006G211400--Sobic008G036000 Sobic006G211400--Sobic010G036800 Sobic002G180600 Sobic002G180600 Sobic001G094400--Sobic002G180600 Sobic003G429300 Sobic003G429300 Sobic001G094400--Sobic003G429300 Sobic002G261800 Sobic002G261800 Sobic001G094400--Sobic002G261800 Sobic010G228000 Sobic010G228000 Sobic001G094400--Sobic010G228000 Sobic001G206400 Sobic001G206400 Sobic001G094400--Sobic001G206400 Sobic004G325700 Sobic004G325700 Sobic001G094400--Sobic004G325700 Sobic001G064800 Sobic001G064800 Sobic001G094400--Sobic001G064800 Sobic007G171000 Sobic007G171000 Sobic001G094400--Sobic007G171000 Sobic006G062800 Sobic006G062800 Sobic001G094400--Sobic006G062800 Sobic004G152700--Sobic004G103800 Sobic004G152700--Sobic002G259000 Sobic004G104100 Sobic004G104100 Sobic004G152700--Sobic004G104100 Sobic010G230700 Sobic010G230700 Sobic004G152700--Sobic010G230700 Sobic004G152700--Sobic010G182300 Sobic006G221200 Sobic006G221200 Sobic004G152700--Sobic006G221200 Sobic004G104300 Sobic004G104300 Sobic004G152700--Sobic004G104300 Sobic004G145801 Sobic004G145801 Sobic004G152700--Sobic004G145801 Sobic004G152700--Sobic010G259900
Octagon: transcription factors


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