Gene annotation
Transcriptome id Sobic.007G080840.1
Synonym -
Functional annotation -
UniProt A0A1Z5R8M4
Pfam PF08263 PF00560 PF13855
Panther DB PTHR27004 PTHR27004:SF44
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G36180 : Leucine-rich receptor-like protein kinase family protein
RAP-DB (Rice) LOC_Os10g03100.1 : Cf2/Cf5 disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G006280.1 , HORVU3Hr1G004090.2 , HORVU3Hr1G004090.3 , HORVU3Hr1G004090.1
Wheat TraesCS5D02G029200 , TraesCS5B02G020100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G111400 lipase, putative, expressed -
2 Sobic.006G211400 Terpenoid cyclases/Protein prenyltransferases superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@terpene synthase, putative, expressed K15793: acyclic sesquiterpene synthase
3 Sobic.003G299800 RING-H2 finger protein, putative, expressed K19038: E3 ubiquitin-protein ligase ATL41
4 Sobic.008G038000 expressed protein -
5 Sobic.007G011000 synaptobrevin-related family protein, putative, expressed -
6 Sobic.004G147900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
7 Sobic.006G269250 - -
8 Sobic.001G032000 peptide transporter PTR2, putative, expressed -
9 Sobic.003G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCML16 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
10 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
11 Sobic.003G400200 plant-specific domain TIGR01615 family protein, expressed -
12 Sobic.010G036800 expressed protein -
13 Sobic.009G197600 O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase family protein("PubMedID : 26759170,PubMedID : 24597475")@O-methyltransferase, putative, expressed -
14 Sobic.001G225600 expressed protein -
15 Sobic.003G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
16 Sobic.006G168300 "NUDIX family, domain containing protein"("PubMedID : 26759170,PubMedID : 24597475")@hydrolase, NUDIX family, domain containing protein, expressed -
17 Sobic.001G062132 - -
18 Sobic.006G227750 - -
19 Sobic.004G311500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR12 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
20 Sobic.002G417500 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein


Gene co-expression network
sample Sobic007G080840 Sobic007G080840 Sobic005G111400 Sobic005G111400 Sobic007G080840--Sobic005G111400 Sobic006G211400 Sobic006G211400 Sobic007G080840--Sobic006G211400 Sobic003G299800 Sobic003G299800 Sobic007G080840--Sobic003G299800 Sobic008G038000 Sobic008G038000 Sobic007G080840--Sobic008G038000 Sobic007G011000 Sobic007G011000 Sobic007G080840--Sobic007G011000 Sobic004G147900 Sobic004G147900 Sobic007G080840--Sobic004G147900 Sobic006G269250 Sobic006G269250 Sobic007G080840--Sobic006G269250 Sobic001G032000 Sobic001G032000 Sobic007G080840--Sobic001G032000 Sobic003G082600 Sobic003G082600 Sobic007G080840--Sobic003G082600 Sobic005G111400--Sobic006G211400 Sobic010G036800 Sobic010G036800 Sobic005G111400--Sobic010G036800 Sobic006G026700 Sobic006G026700 Sobic005G111400--Sobic006G026700 Sobic008G036000 Sobic008G036000 Sobic005G111400--Sobic008G036000 Sobic004G051166 Sobic004G051166 Sobic005G111400--Sobic004G051166 Sobic004G084100 Sobic004G084100 Sobic005G111400--Sobic004G084100 Sobic006G101100 Sobic006G101100 Sobic005G111400--Sobic006G101100 Sobic002G036100 Sobic002G036100 Sobic005G111400--Sobic002G036100 Sobic009G197600 Sobic009G197600 Sobic005G111400--Sobic009G197600 Sobic006G211400--Sobic005G111400 Sobic006G211400--Sobic009G197600 Sobic007G057100 Sobic007G057100 Sobic006G211400--Sobic007G057100 Sobic006G211400--Sobic004G051166 Sobic001G489600 Sobic001G489600 Sobic006G211400--Sobic001G489600 Sobic004G280900 Sobic004G280900 Sobic006G211400--Sobic004G280900 Sobic006G211400--Sobic006G101100 Sobic006G211400--Sobic008G036000 Sobic006G211400--Sobic010G036800 Sobic001G225600 Sobic001G225600 Sobic003G299800--Sobic001G225600 Sobic004G352900 Sobic004G352900 Sobic003G299800--Sobic004G352900 Sobic002G427900 Sobic002G427900 Sobic003G299800--Sobic002G427900 Sobic001G530350 Sobic001G530350 Sobic003G299800--Sobic001G530350 Sobic001G285000 Sobic001G285000 Sobic003G299800--Sobic001G285000 Sobic001G410100 Sobic001G410100 Sobic003G299800--Sobic001G410100 Sobic009G249000 Sobic009G249000 Sobic003G299800--Sobic009G249000 Sobic009G100800 Sobic009G100800 Sobic003G299800--Sobic009G100800 Sobic001G526900 Sobic001G526900 Sobic003G299800--Sobic001G526900 Sobic004G152400 Sobic004G152400 Sobic008G038000--Sobic004G152400 Sobic009G038300 Sobic009G038300 Sobic008G038000--Sobic009G038300 Sobic009G069700 Sobic009G069700 Sobic008G038000--Sobic009G069700 Sobic002G258800 Sobic002G258800 Sobic008G038000--Sobic002G258800 Sobic008G038000--Sobic003G299800 Sobic010G041700 Sobic010G041700 Sobic008G038000--Sobic010G041700 Sobic008G038000--Sobic006G211400 Sobic001G094400 Sobic001G094400 Sobic008G038000--Sobic001G094400 Sobic004G152700 Sobic004G152700 Sobic008G038000--Sobic004G152700 Sobic002G118600 Sobic002G118600 Sobic007G011000--Sobic002G118600 Sobic002G330300 Sobic002G330300 Sobic007G011000--Sobic002G330300 Sobic010G228000 Sobic010G228000 Sobic007G011000--Sobic010G228000 Sobic007G212200 Sobic007G212200 Sobic007G011000--Sobic007G212200 Sobic004G280800 Sobic004G280800 Sobic007G011000--Sobic004G280800 Sobic003G425200 Sobic003G425200 Sobic007G011000--Sobic003G425200 Sobic002G354900 Sobic002G354900 Sobic007G011000--Sobic002G354900 Sobic007G011000--Sobic010G041700 Sobic004G025000 Sobic004G025000 Sobic007G011000--Sobic004G025000 Sobic004G147900--Sobic007G057100 Sobic003G035700 Sobic003G035700 Sobic004G147900--Sobic003G035700 Sobic001G290400 Sobic001G290400 Sobic004G147900--Sobic001G290400 Sobic009G155200 Sobic009G155200 Sobic004G147900--Sobic009G155200 Sobic003G423500 Sobic003G423500 Sobic004G147900--Sobic003G423500 Sobic004G147900--Sobic004G051166 Sobic003G158500 Sobic003G158500 Sobic004G147900--Sobic003G158500 Sobic001G513700 Sobic001G513700 Sobic004G147900--Sobic001G513700 Sobic007G171000 Sobic007G171000 Sobic004G147900--Sobic007G171000 Sobic003G400200 Sobic003G400200 Sobic006G269250--Sobic003G400200 Sobic001G225200 Sobic001G225200 Sobic006G269250--Sobic001G225200 Sobic006G101300 Sobic006G101300 Sobic006G269250--Sobic006G101300 Sobic003G418500 Sobic003G418500 Sobic006G269250--Sobic003G418500 Sobic006G234900 Sobic006G234900 Sobic006G269250--Sobic006G234900 Sobic008G066200 Sobic008G066200 Sobic006G269250--Sobic008G066200 Sobic004G109900 Sobic004G109900 Sobic006G269250--Sobic004G109900 Sobic010G166500 Sobic010G166500 Sobic006G269250--Sobic010G166500 Sobic008G022000 Sobic008G022000 Sobic006G269250--Sobic008G022000 Sobic003G290300 Sobic003G290300 Sobic001G032000--Sobic003G290300 Sobic009G023200 Sobic009G023200 Sobic001G032000--Sobic009G023200 Sobic001G032000--Sobic003G082600 Sobic001G234800 Sobic001G234800 Sobic001G032000--Sobic001G234800 Sobic003G202200 Sobic003G202200 Sobic001G032000--Sobic003G202200 Sobic002G405600 Sobic002G405600 Sobic001G032000--Sobic002G405600 Sobic002G345850 Sobic002G345850 Sobic001G032000--Sobic002G345850 Sobic010G204600 Sobic010G204600 Sobic001G032000--Sobic010G204600 Sobic006G206000 Sobic006G206000 Sobic001G032000--Sobic006G206000 Sobic010G267600 Sobic010G267600 Sobic003G082600--Sobic010G267600 Sobic002G245800 Sobic002G245800 Sobic003G082600--Sobic002G245800 Sobic003G082600--Sobic002G405600 Sobic003G092900 Sobic003G092900 Sobic003G082600--Sobic003G092900 Sobic005G109000 Sobic005G109000 Sobic003G082600--Sobic005G109000 Sobic003G082600--Sobic003G202200 Sobic001G259700 Sobic001G259700 Sobic003G082600--Sobic001G259700 Sobic003G102200 Sobic003G102200 Sobic003G082600--Sobic003G102200 Sobic003G021500 Sobic003G021500 Sobic003G082600--Sobic003G021500
Octagon: transcription factors


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