Gene annotation
Transcriptome id Sobic.009G038300.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6P6D4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g05060.1 : expressed protein
MaizeGDB (Corn) Zm00025a055370
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.009G038300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G038000 expressed protein -
2 Sobic.003G299800 RING-H2 finger protein, putative, expressed K19038: E3 ubiquitin-protein ligase ATL41
3 Sobic.004G152400 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
4 Sobic.002G214800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
5 Sobic.002G066400 OsFBDUF18 - F-box and DUF domain containing protein, expressed -
6 Sobic.001G234300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, RING-type, putative, expressed -
7 Sobic.002G022400 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
8 Sobic.004G152700 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
9 Sobic.006G159300 remorin, putative, expressed -
10 Sobic.003G321700 KH domain containing protein, putative, expressed K11884: PNO1, RNA-binding protein PNO1
11 Sobic.010G183500 expressed protein -
12 Sobic.009G069700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Transcriptional repressor(PubMedID : 30367619)@OsIAA16 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
13 Sobic.001G343900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
14 Sobic.001G321500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX391 - F-box domain containing protein, expressed -
15 Sobic.002G034500 ERD4 protein, putative, expressed -
16 Sobic.002G258800 ribosomal protein L7Ae, putative, expressed K02936: RP-L7Ae, large subunit ribosomal protein L7Ae
17 Sobic.010G029400 peptidase, T1 family, putative, expressed K02738: 20S proteasome subunit beta 1
18 Sobic.006G047000 CBS domain containing membrane protein, putative, expressed -
19 Sobic.009G100800 expressed protein -
20 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A


Gene co-expression network
sample Sobic009G038300 Sobic009G038300 Sobic008G038000 Sobic008G038000 Sobic009G038300--Sobic008G038000 Sobic003G299800 Sobic003G299800 Sobic009G038300--Sobic003G299800 Sobic004G152400 Sobic004G152400 Sobic009G038300--Sobic004G152400 Sobic002G214800 Sobic002G214800 Sobic009G038300--Sobic002G214800 Sobic002G066400 Sobic002G066400 Sobic009G038300--Sobic002G066400 Sobic001G234300 Sobic001G234300 Sobic009G038300--Sobic001G234300 Sobic002G022400 Sobic002G022400 Sobic009G038300--Sobic002G022400 Sobic004G152700 Sobic004G152700 Sobic009G038300--Sobic004G152700 Sobic006G159300 Sobic006G159300 Sobic009G038300--Sobic006G159300 Sobic008G038000--Sobic004G152400 Sobic008G038000--Sobic009G038300 Sobic009G069700 Sobic009G069700 Sobic008G038000--Sobic009G069700 Sobic002G258800 Sobic002G258800 Sobic008G038000--Sobic002G258800 Sobic008G038000--Sobic003G299800 Sobic010G041700 Sobic010G041700 Sobic008G038000--Sobic010G041700 Sobic006G211400 Sobic006G211400 Sobic008G038000--Sobic006G211400 Sobic001G094400 Sobic001G094400 Sobic008G038000--Sobic001G094400 Sobic008G038000--Sobic004G152700 Sobic001G225600 Sobic001G225600 Sobic003G299800--Sobic001G225600 Sobic004G352900 Sobic004G352900 Sobic003G299800--Sobic004G352900 Sobic002G427900 Sobic002G427900 Sobic003G299800--Sobic002G427900 Sobic001G530350 Sobic001G530350 Sobic003G299800--Sobic001G530350 Sobic001G285000 Sobic001G285000 Sobic003G299800--Sobic001G285000 Sobic001G410100 Sobic001G410100 Sobic003G299800--Sobic001G410100 Sobic009G249000 Sobic009G249000 Sobic003G299800--Sobic009G249000 Sobic009G100800 Sobic009G100800 Sobic003G299800--Sobic009G100800 Sobic001G526900 Sobic001G526900 Sobic003G299800--Sobic001G526900 Sobic004G152400--Sobic002G258800 Sobic004G152400--Sobic004G152700 Sobic002G259000 Sobic002G259000 Sobic004G152400--Sobic002G259000 Sobic010G182300 Sobic010G182300 Sobic004G152400--Sobic010G182300 Sobic004G103800 Sobic004G103800 Sobic004G152400--Sobic004G103800 Sobic003G107600 Sobic003G107600 Sobic004G152400--Sobic003G107600 Sobic001G505100 Sobic001G505100 Sobic004G152400--Sobic001G505100 Sobic010G029400 Sobic010G029400 Sobic004G152400--Sobic010G029400 Sobic010G259900 Sobic010G259900 Sobic004G152400--Sobic010G259900 Sobic005G109000 Sobic005G109000 Sobic002G214800--Sobic005G109000 Sobic007G151100 Sobic007G151100 Sobic002G214800--Sobic007G151100 Sobic002G202100 Sobic002G202100 Sobic002G214800--Sobic002G202100 Sobic004G186500 Sobic004G186500 Sobic002G214800--Sobic004G186500 Sobic003G082600 Sobic003G082600 Sobic002G214800--Sobic003G082600 Sobic002G214800--Sobic009G069700 Sobic002G374100 Sobic002G374100 Sobic002G214800--Sobic002G374100 Sobic002G245800 Sobic002G245800 Sobic002G214800--Sobic002G245800 Sobic010G083600 Sobic010G083600 Sobic002G214800--Sobic010G083600 Sobic002G330000 Sobic002G330000 Sobic002G066400--Sobic002G330000 Sobic003G181500 Sobic003G181500 Sobic002G066400--Sobic003G181500 Sobic009G230100 Sobic009G230100 Sobic002G066400--Sobic009G230100 Sobic009G023200 Sobic009G023200 Sobic002G066400--Sobic009G023200 Sobic003G321700 Sobic003G321700 Sobic002G066400--Sobic003G321700 Sobic004G308400 Sobic004G308400 Sobic002G066400--Sobic004G308400 Sobic010G003700 Sobic010G003700 Sobic002G066400--Sobic010G003700 Sobic003G350300 Sobic003G350300 Sobic002G066400--Sobic003G350300 Sobic010G237000 Sobic010G237000 Sobic002G066400--Sobic010G237000 Sobic006G193000 Sobic006G193000 Sobic001G234300--Sobic006G193000 Sobic002G082600 Sobic002G082600 Sobic001G234300--Sobic002G082600 Sobic003G021500 Sobic003G021500 Sobic001G234300--Sobic003G021500 Sobic002G034500 Sobic002G034500 Sobic001G234300--Sobic002G034500 Sobic006G047000 Sobic006G047000 Sobic001G234300--Sobic006G047000 Sobic002G174200 Sobic002G174200 Sobic001G234300--Sobic002G174200 Sobic003G364600 Sobic003G364600 Sobic001G234300--Sobic003G364600 Sobic001G234300--Sobic010G041700 Sobic001G483400 Sobic001G483400 Sobic001G234300--Sobic001G483400 Sobic003G249800 Sobic003G249800 Sobic002G022400--Sobic003G249800 Sobic002G022400--Sobic002G330000 Sobic008G161000 Sobic008G161000 Sobic002G022400--Sobic008G161000 Sobic005G092800 Sobic005G092800 Sobic002G022400--Sobic005G092800 Sobic002G022400--Sobic003G321700 Sobic002G022400--Sobic004G152700 Sobic010G204600 Sobic010G204600 Sobic002G022400--Sobic010G204600 Sobic001G422900 Sobic001G422900 Sobic002G022400--Sobic001G422900 Sobic005G157200 Sobic005G157200 Sobic002G022400--Sobic005G157200 Sobic004G152700--Sobic004G103800 Sobic004G152700--Sobic002G259000 Sobic004G104100 Sobic004G104100 Sobic004G152700--Sobic004G104100 Sobic010G230700 Sobic010G230700 Sobic004G152700--Sobic010G230700 Sobic004G152700--Sobic010G182300 Sobic006G221200 Sobic006G221200 Sobic004G152700--Sobic006G221200 Sobic004G104300 Sobic004G104300 Sobic004G152700--Sobic004G104300 Sobic004G145801 Sobic004G145801 Sobic004G152700--Sobic004G145801 Sobic004G152700--Sobic010G259900 Sobic001G252300 Sobic001G252300 Sobic006G159300--Sobic001G252300 Sobic009G070400 Sobic009G070400 Sobic006G159300--Sobic009G070400 Sobic004G144500 Sobic004G144500 Sobic006G159300--Sobic004G144500 Sobic003G334600 Sobic003G334600 Sobic006G159300--Sobic003G334600 Sobic006G159300--Sobic002G082600 Sobic005G195301 Sobic005G195301 Sobic006G159300--Sobic005G195301 Sobic004G166400 Sobic004G166400 Sobic006G159300--Sobic004G166400 Sobic004G177700 Sobic004G177700 Sobic006G159300--Sobic004G177700 Sobic002G055600 Sobic002G055600 Sobic006G159300--Sobic002G055600
Octagon: transcription factors


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