Gene annotation
Transcriptome id Sobic.010G183500.1
Synonym Sb10g023410
Functional annotation expressed protein
UniProt C5Z5L2
Pfam PF15697
Panther DB PTHR33730 PTHR33730:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15400 : -
RAP-DB (Rice) LOC_Os06g39912.1 : expressed protein
MaizeGDB (Corn) Zm00025a051195 , Zm00025a042250
Brachypodium -
Barley HORVU7Hr1G084290.4 , HORVU7Hr1G084290.1 , HORVU7Hr1G084290.2 , HORVU7Hr1G084290.3
Wheat -
Populus -


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cDNA sequences
Sobic.010G183500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G174200 WRKY74, expressed -
2 Sobic.001G483400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
3 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.010G220200 haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed -
5 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
6 Sobic.002G224500 down-regulated TF in developmental senescence(PubMedID : 27586543)@bHelix-loop-helix transcription factor, putative, expressed -
7 Sobic.009G247300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY11, expressed -
8 Sobic.006G190500 expressed protein -
9 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.003G334600 NAC domain transcription factor, putative, expressed -
11 Sobic.006G231200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
12 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
13 Sobic.002G405600 early response to dehydration 15, putative, expressed -
14 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
15 Sobic.009G111200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
16 Sobic.001G477600 zinc finger protein, putative, expressed -
17 Sobic.003G364600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
18 Sobic.003G387000 expressed protein -
19 Sobic.006G193000 RING-H2 finger protein ATL2A, putative, expressed -
20 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -


Gene co-expression network
sample Sobic010G183500 Sobic010G183500 Sobic002G174200 Sobic002G174200 Sobic010G183500--Sobic002G174200 Sobic001G483400 Sobic001G483400 Sobic010G183500--Sobic001G483400 Sobic005G010200 Sobic005G010200 Sobic010G183500--Sobic005G010200 Sobic010G220200 Sobic010G220200 Sobic010G183500--Sobic010G220200 Sobic006G230900 Sobic006G230900 Sobic010G183500--Sobic006G230900 Sobic002G224500 Sobic002G224500 Sobic010G183500--Sobic002G224500 Sobic009G247300 Sobic009G247300 Sobic010G183500--Sobic009G247300 Sobic006G190500 Sobic006G190500 Sobic010G183500--Sobic006G190500 Sobic010G217800 Sobic010G217800 Sobic010G183500--Sobic010G217800 Sobic001G259600 Sobic001G259600 Sobic002G174200--Sobic001G259600 Sobic009G036000 Sobic009G036000 Sobic002G174200--Sobic009G036000 Sobic002G174200--Sobic001G483400 Sobic001G259700 Sobic001G259700 Sobic002G174200--Sobic001G259700 Sobic007G213800 Sobic007G213800 Sobic002G174200--Sobic007G213800 Sobic006G190100 Sobic006G190100 Sobic002G174200--Sobic006G190100 Sobic002G405600 Sobic002G405600 Sobic002G174200--Sobic002G405600 Sobic002G291900 Sobic002G291900 Sobic002G174200--Sobic002G291900 Sobic003G313800 Sobic003G313800 Sobic002G174200--Sobic003G313800 Sobic001G483400--Sobic005G010200 Sobic001G483400--Sobic010G220200 Sobic009G129000 Sobic009G129000 Sobic001G483400--Sobic009G129000 Sobic001G483400--Sobic002G174200 Sobic004G065500 Sobic004G065500 Sobic001G483400--Sobic004G065500 Sobic001G483400--Sobic006G230900 Sobic001G483400--Sobic006G190500 Sobic001G483400--Sobic010G217800 Sobic002G082600 Sobic002G082600 Sobic001G483400--Sobic002G082600 Sobic005G010200--Sobic010G220200 Sobic005G010200--Sobic001G483400 Sobic008G177800 Sobic008G177800 Sobic005G010200--Sobic008G177800 Sobic009G111200 Sobic009G111200 Sobic005G010200--Sobic009G111200 Sobic005G010200--Sobic006G190500 Sobic005G010200--Sobic010G217800 Sobic002G415600 Sobic002G415600 Sobic005G010200--Sobic002G415600 Sobic009G066800 Sobic009G066800 Sobic005G010200--Sobic009G066800 Sobic005G010200--Sobic009G129000 Sobic010G220200--Sobic010G217800 Sobic010G220200--Sobic005G010200 Sobic010G220200--Sobic002G415600 Sobic010G220200--Sobic006G190500 Sobic006G230800 Sobic006G230800 Sobic010G220200--Sobic006G230800 Sobic003G288600 Sobic003G288600 Sobic010G220200--Sobic003G288600 Sobic006G231100 Sobic006G231100 Sobic010G220200--Sobic006G231100 Sobic010G220200--Sobic008G177800 Sobic010G220200--Sobic006G230900 Sobic006G231200 Sobic006G231200 Sobic006G230900--Sobic006G231200 Sobic006G230900--Sobic006G231100 Sobic002G282300 Sobic002G282300 Sobic006G230900--Sobic002G282300 Sobic006G230900--Sobic007G213800 Sobic006G230900--Sobic010G217800 Sobic006G230900--Sobic002G415600 Sobic003G144700 Sobic003G144700 Sobic006G230900--Sobic003G144700 Sobic003G123600 Sobic003G123600 Sobic006G230900--Sobic003G123600 Sobic003G197200 Sobic003G197200 Sobic006G230900--Sobic003G197200 Sobic003G367200 Sobic003G367200 Sobic002G224500--Sobic003G367200 Sobic003G334600 Sobic003G334600 Sobic002G224500--Sobic003G334600 Sobic003G369100 Sobic003G369100 Sobic002G224500--Sobic003G369100 Sobic004G336500 Sobic004G336500 Sobic002G224500--Sobic004G336500 Sobic001G112200 Sobic001G112200 Sobic002G224500--Sobic001G112200 Sobic001G138600 Sobic001G138600 Sobic002G224500--Sobic001G138600 Sobic004G280200 Sobic004G280200 Sobic002G224500--Sobic004G280200 Sobic002G224500--Sobic006G190100 Sobic003G382800 Sobic003G382800 Sobic002G224500--Sobic003G382800 Sobic002G036100 Sobic002G036100 Sobic009G247300--Sobic002G036100 Sobic009G247300--Sobic009G066800 Sobic004G297200 Sobic004G297200 Sobic009G247300--Sobic004G297200 Sobic009G247300--Sobic001G259600 Sobic001G040200 Sobic001G040200 Sobic009G247300--Sobic001G040200 Sobic009G247300--Sobic002G174200 Sobic006G089300 Sobic006G089300 Sobic009G247300--Sobic006G089300 Sobic010G200700 Sobic010G200700 Sobic009G247300--Sobic010G200700 Sobic004G286600 Sobic004G286600 Sobic009G247300--Sobic004G286600 Sobic006G190500--Sobic006G230800 Sobic006G190500--Sobic003G123600 Sobic006G190500--Sobic006G190100 Sobic006G190500--Sobic002G415600 Sobic006G190500--Sobic006G230900 Sobic006G190500--Sobic009G111200 Sobic006G190500--Sobic010G217800 Sobic006G190500--Sobic003G144700 Sobic006G190500--Sobic010G220200 Sobic010G217800--Sobic002G415600 Sobic010G217800--Sobic006G230900 Sobic010G217800--Sobic003G144700 Sobic010G217800--Sobic003G123600 Sobic010G217800--Sobic006G231200 Sobic010G217800--Sobic006G231100 Sobic006G267200 Sobic006G267200 Sobic010G217800--Sobic006G267200 Sobic010G217800--Sobic010G220200 Sobic010G217800--Sobic008G177800
Octagon: transcription factors


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