Gene annotation
Transcriptome id Sobic.006G010700.1
Synonym Sb06g001070
Functional annotation GA11916-PA, putative, expressed
UniProt C5YBR8
Pfam PF10639
Panther DB PTHR28668 PTHR28668:SF1
NCBI CDD KOG4831; Unnamed protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G19570 : -
RAP-DB (Rice) LOC_Os05g09600.2 : GA11916-PA, putative, expressed
MaizeGDB (Corn) Zm00025a012246
Brachypodium KQJ81565
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G157800 LITAF-domain-containing protein, putative, expressed K19363: lipopolysaccharide-induced tumor necrosis factor-alpha factor
2 Sobic.001G423500 expressed protein -
3 Sobic.001G064800 expp1 protein precursor, putative, expressed -
4 Sobic.002G136700 expressed protein -
5 Sobic.003G297300 OsFBX24 - F-box domain containing protein, expressed -
6 Sobic.004G011433 - -
7 Sobic.009G214000 expressed protein -
8 Sobic.001G513300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein-methionine-S-oxide reductase, putative, expressed -
9 Sobic.005G058800 plant neutral invertase domain containing protein, expressed -
10 Sobic.001G526100 uncharacterized Cys-rich domain containing protein, putative, expressed -
11 Sobic.007G141100 expressed protein K18179: cytochrome c oxidase assembly factor 6
12 Sobic.009G094450 - -
13 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
14 Sobic.001G057600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
15 Sobic.004G030501 - -
16 Sobic.001G342200 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
17 Sobic.007G016100 - -
18 Sobic.006G039600 expressed protein -
19 Sobic.004G357800 phospholipase A2, putative, expressed -
20 Sobic.003G273900 mitochondrial carrier protein, putative, expressed -


Gene co-expression network
sample Sobic006G010700 Sobic006G010700 Sobic004G157800 Sobic004G157800 Sobic006G010700--Sobic004G157800 Sobic001G423500 Sobic001G423500 Sobic006G010700--Sobic001G423500 Sobic001G064800 Sobic001G064800 Sobic006G010700--Sobic001G064800 Sobic002G136700 Sobic002G136700 Sobic006G010700--Sobic002G136700 Sobic003G297300 Sobic003G297300 Sobic006G010700--Sobic003G297300 Sobic004G011433 Sobic004G011433 Sobic006G010700--Sobic004G011433 Sobic009G214000 Sobic009G214000 Sobic006G010700--Sobic009G214000 Sobic001G513300 Sobic001G513300 Sobic006G010700--Sobic001G513300 Sobic005G058800 Sobic005G058800 Sobic006G010700--Sobic005G058800 Sobic004G157800--Sobic001G064800 Sobic002G078400 Sobic002G078400 Sobic004G157800--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic004G157800--Sobic006G182100 Sobic009G249000 Sobic009G249000 Sobic004G157800--Sobic009G249000 Sobic009G094450 Sobic009G094450 Sobic004G157800--Sobic009G094450 Sobic001G526100 Sobic001G526100 Sobic004G157800--Sobic001G526100 Sobic005G092800 Sobic005G092800 Sobic004G157800--Sobic005G092800 Sobic001G445800 Sobic001G445800 Sobic004G157800--Sobic001G445800 Sobic001G403700 Sobic001G403700 Sobic004G157800--Sobic001G403700 Sobic010G077650 Sobic010G077650 Sobic001G423500--Sobic010G077650 Sobic003G024900 Sobic003G024900 Sobic001G423500--Sobic003G024900 Sobic010G075600 Sobic010G075600 Sobic001G423500--Sobic010G075600 Sobic002G070200 Sobic002G070200 Sobic001G423500--Sobic002G070200 Sobic003G438600 Sobic003G438600 Sobic001G423500--Sobic003G438600 Sobic001G192600 Sobic001G192600 Sobic001G423500--Sobic001G192600 Sobic003G277500 Sobic003G277500 Sobic001G423500--Sobic003G277500 Sobic005G080200 Sobic005G080200 Sobic001G423500--Sobic005G080200 Sobic006G246100 Sobic006G246100 Sobic001G423500--Sobic006G246100 Sobic001G064800--Sobic006G182100 Sobic002G261800 Sobic002G261800 Sobic001G064800--Sobic002G261800 Sobic001G067601 Sobic001G067601 Sobic001G064800--Sobic001G067601 Sobic010G153100 Sobic010G153100 Sobic001G064800--Sobic010G153100 Sobic001G019900 Sobic001G019900 Sobic001G064800--Sobic001G019900 Sobic001G064800--Sobic001G445800 Sobic010G204300 Sobic010G204300 Sobic001G064800--Sobic010G204300 Sobic001G064800--Sobic004G157800 Sobic001G206400 Sobic001G206400 Sobic001G064800--Sobic001G206400 Sobic004G228700 Sobic004G228700 Sobic002G136700--Sobic004G228700 Sobic003G215700 Sobic003G215700 Sobic002G136700--Sobic003G215700 Sobic002G418400 Sobic002G418400 Sobic002G136700--Sobic002G418400 Sobic010G028200 Sobic010G028200 Sobic002G136700--Sobic010G028200 Sobic003G209000 Sobic003G209000 Sobic002G136700--Sobic003G209000 Sobic003G218400 Sobic003G218400 Sobic002G136700--Sobic003G218400 Sobic001G047800 Sobic001G047800 Sobic002G136700--Sobic001G047800 Sobic001G533500 Sobic001G533500 Sobic002G136700--Sobic001G533500 Sobic002G135200 Sobic002G135200 Sobic002G136700--Sobic002G135200 Sobic001G044500 Sobic001G044500 Sobic003G297300--Sobic001G044500 Sobic010G264500 Sobic010G264500 Sobic003G297300--Sobic010G264500 Sobic005G207400 Sobic005G207400 Sobic003G297300--Sobic005G207400 Sobic005G019100 Sobic005G019100 Sobic003G297300--Sobic005G019100 Sobic003G297300--Sobic006G010700 Sobic001G057600 Sobic001G057600 Sobic003G297300--Sobic001G057600 Sobic003G284600 Sobic003G284600 Sobic003G297300--Sobic003G284600 Sobic007G177500 Sobic007G177500 Sobic003G297300--Sobic007G177500 Sobic007G077532 Sobic007G077532 Sobic003G297300--Sobic007G077532 Sobic010G039000 Sobic010G039000 Sobic004G011433--Sobic010G039000 Sobic010G225201 Sobic010G225201 Sobic004G011433--Sobic010G225201 Sobic001G250600 Sobic001G250600 Sobic004G011433--Sobic001G250600 Sobic004G106700 Sobic004G106700 Sobic004G011433--Sobic004G106700 Sobic002G345000 Sobic002G345000 Sobic004G011433--Sobic002G345000 Sobic002G034750 Sobic002G034750 Sobic004G011433--Sobic002G034750 Sobic010G194200 Sobic010G194200 Sobic004G011433--Sobic010G194200 Sobic001G451901 Sobic001G451901 Sobic004G011433--Sobic001G451901 Sobic002G335400 Sobic002G335400 Sobic004G011433--Sobic002G335400 Sobic009G012000 Sobic009G012000 Sobic009G214000--Sobic009G012000 Sobic001G341300 Sobic001G341300 Sobic009G214000--Sobic001G341300 Sobic004G152400 Sobic004G152400 Sobic009G214000--Sobic004G152400 Sobic009G011901 Sobic009G011901 Sobic009G214000--Sobic009G011901 Sobic001G354000 Sobic001G354000 Sobic009G214000--Sobic001G354000 Sobic003G107400 Sobic003G107400 Sobic009G214000--Sobic003G107400 Sobic004G152700 Sobic004G152700 Sobic009G214000--Sobic004G152700 Sobic006G159400 Sobic006G159400 Sobic009G214000--Sobic006G159400 Sobic002G119800 Sobic002G119800 Sobic009G214000--Sobic002G119800 Sobic003G273000 Sobic003G273000 Sobic001G513300--Sobic003G273000 Sobic001G513300--Sobic004G228700 Sobic007G016100 Sobic007G016100 Sobic001G513300--Sobic007G016100 Sobic001G308700 Sobic001G308700 Sobic001G513300--Sobic001G308700 Sobic010G031000 Sobic010G031000 Sobic001G513300--Sobic010G031000 Sobic001G513300--Sobic002G136700 Sobic001G508466 Sobic001G508466 Sobic001G513300--Sobic001G508466 Sobic001G295100 Sobic001G295100 Sobic001G513300--Sobic001G295100 Sobic002G362000 Sobic002G362000 Sobic001G513300--Sobic002G362000 Sobic010G209900 Sobic010G209900 Sobic005G058800--Sobic010G209900 Sobic001G339700 Sobic001G339700 Sobic005G058800--Sobic001G339700 Sobic005G084600 Sobic005G084600 Sobic005G058800--Sobic005G084600 Sobic004G176600 Sobic004G176600 Sobic005G058800--Sobic004G176600 Sobic002G375400 Sobic002G375400 Sobic005G058800--Sobic002G375400 Sobic001G533400 Sobic001G533400 Sobic005G058800--Sobic001G533400 Sobic001G243600 Sobic001G243600 Sobic005G058800--Sobic001G243600 Sobic008G112600 Sobic008G112600 Sobic005G058800--Sobic008G112600 Sobic009G106800 Sobic009G106800 Sobic005G058800--Sobic009G106800
Octagon: transcription factors


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