Gene annotation
Transcriptome id Sobic.003G297300.1
Synonym Sb03g034760
Functional annotation OsFBX24 - F-box domain containing protein, expressed
UniProt C5XK52
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF57
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G44060 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os01g54850.1 : OsFBX24 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G044500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transporter-related, putative, expressed -
2 Sobic.010G264500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR29 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
3 Sobic.005G207400 - -
4 Sobic.005G019100 TRAF-type zinc finger family protein, expressed -
5 Sobic.006G010700 GA11916-PA, putative, expressed -
6 Sobic.001G057600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
7 Sobic.003G284600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX23 - F-box domain containing protein, expressed -
8 Sobic.007G177500 thaumatin, putative, expressed -
9 Sobic.007G077532 - K08597: SENP8, NEDP1, sentrin-specific protease 8
10 Sobic.005G211301 - -
11 Sobic.003G196600 expressed protein -
12 Sobic.009G050000 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
13 Sobic.010G225201 - -
14 Sobic.004G192800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@mitochondrial prohibitin complex protein 1, putative, expressed K17080: prohibitin 1
15 Sobic.003G308800 transmembrane protein 56, putative, expressed -
16 Sobic.008G006000 expressed protein -
17 Sobic.003G139200 - -
18 Sobic.010G039000 expressed protein -
19 Sobic.010G095400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@urea active transporter, putative, expressed -
20 Sobic.002G034750 - -


Gene co-expression network
sample Sobic003G297300 Sobic003G297300 Sobic001G044500 Sobic001G044500 Sobic003G297300--Sobic001G044500 Sobic010G264500 Sobic010G264500 Sobic003G297300--Sobic010G264500 Sobic005G207400 Sobic005G207400 Sobic003G297300--Sobic005G207400 Sobic005G019100 Sobic005G019100 Sobic003G297300--Sobic005G019100 Sobic006G010700 Sobic006G010700 Sobic003G297300--Sobic006G010700 Sobic001G057600 Sobic001G057600 Sobic003G297300--Sobic001G057600 Sobic003G284600 Sobic003G284600 Sobic003G297300--Sobic003G284600 Sobic007G177500 Sobic007G177500 Sobic003G297300--Sobic007G177500 Sobic007G077532 Sobic007G077532 Sobic003G297300--Sobic007G077532 Sobic009G235600 Sobic009G235600 Sobic001G044500--Sobic009G235600 Sobic010G043200 Sobic010G043200 Sobic001G044500--Sobic010G043200 Sobic004G192800 Sobic004G192800 Sobic001G044500--Sobic004G192800 Sobic007G106900 Sobic007G106900 Sobic001G044500--Sobic007G106900 Sobic001G118300 Sobic001G118300 Sobic001G044500--Sobic001G118300 Sobic009G241000 Sobic009G241000 Sobic001G044500--Sobic009G241000 Sobic002G139600 Sobic002G139600 Sobic001G044500--Sobic002G139600 Sobic009G088800 Sobic009G088800 Sobic001G044500--Sobic009G088800 Sobic001G151800 Sobic001G151800 Sobic001G044500--Sobic001G151800 Sobic002G273900 Sobic002G273900 Sobic010G264500--Sobic002G273900 Sobic004G237600 Sobic004G237600 Sobic010G264500--Sobic004G237600 Sobic004G003501 Sobic004G003501 Sobic010G264500--Sobic004G003501 Sobic010G243400 Sobic010G243400 Sobic010G264500--Sobic010G243400 Sobic003G102600 Sobic003G102600 Sobic010G264500--Sobic003G102600 Sobic001G413200 Sobic001G413200 Sobic010G264500--Sobic001G413200 Sobic002G361300 Sobic002G361300 Sobic010G264500--Sobic002G361300 Sobic005G091600 Sobic005G091600 Sobic010G264500--Sobic005G091600 Sobic001G127000 Sobic001G127000 Sobic010G264500--Sobic001G127000 Sobic001G378200 Sobic001G378200 Sobic005G207400--Sobic001G378200 Sobic004G025300 Sobic004G025300 Sobic005G207400--Sobic004G025300 Sobic004G078700 Sobic004G078700 Sobic005G207400--Sobic004G078700 Sobic001G261432 Sobic001G261432 Sobic005G207400--Sobic001G261432 Sobic001G332300 Sobic001G332300 Sobic005G207400--Sobic001G332300 Sobic005G207400--Sobic007G077532 Sobic001G312500 Sobic001G312500 Sobic005G207400--Sobic001G312500 Sobic005G207400--Sobic001G127000 Sobic003G202600 Sobic003G202600 Sobic005G207400--Sobic003G202600 Sobic003G129900 Sobic003G129900 Sobic005G019100--Sobic003G129900 Sobic004G256700 Sobic004G256700 Sobic005G019100--Sobic004G256700 Sobic001G387200 Sobic001G387200 Sobic005G019100--Sobic001G387200 Sobic006G120900 Sobic006G120900 Sobic005G019100--Sobic006G120900 Sobic004G173700 Sobic004G173700 Sobic005G019100--Sobic004G173700 Sobic001G518500 Sobic001G518500 Sobic005G019100--Sobic001G518500 Sobic001G408400 Sobic001G408400 Sobic005G019100--Sobic001G408400 Sobic003G137600 Sobic003G137600 Sobic005G019100--Sobic003G137600 Sobic007G219500 Sobic007G219500 Sobic005G019100--Sobic007G219500 Sobic004G157800 Sobic004G157800 Sobic006G010700--Sobic004G157800 Sobic001G423500 Sobic001G423500 Sobic006G010700--Sobic001G423500 Sobic001G064800 Sobic001G064800 Sobic006G010700--Sobic001G064800 Sobic002G136700 Sobic002G136700 Sobic006G010700--Sobic002G136700 Sobic006G010700--Sobic003G297300 Sobic004G011433 Sobic004G011433 Sobic006G010700--Sobic004G011433 Sobic009G214000 Sobic009G214000 Sobic006G010700--Sobic009G214000 Sobic001G513300 Sobic001G513300 Sobic006G010700--Sobic001G513300 Sobic005G058800 Sobic005G058800 Sobic006G010700--Sobic005G058800 Sobic001G057600--Sobic009G088800 Sobic006G118400 Sobic006G118400 Sobic001G057600--Sobic006G118400 Sobic004G186300 Sobic004G186300 Sobic001G057600--Sobic004G186300 Sobic001G057600--Sobic001G118300 Sobic001G057600--Sobic004G192800 Sobic001G057600--Sobic005G019100 Sobic009G050000 Sobic009G050000 Sobic001G057600--Sobic009G050000 Sobic005G044300 Sobic005G044300 Sobic001G057600--Sobic005G044300 Sobic008G129000 Sobic008G129000 Sobic001G057600--Sobic008G129000 Sobic007G004300 Sobic007G004300 Sobic003G284600--Sobic007G004300 Sobic010G095400 Sobic010G095400 Sobic003G284600--Sobic010G095400 Sobic003G284600--Sobic006G120900 Sobic004G176200 Sobic004G176200 Sobic003G284600--Sobic004G176200 Sobic003G284600--Sobic001G408400 Sobic008G054200 Sobic008G054200 Sobic003G284600--Sobic008G054200 Sobic004G074600 Sobic004G074600 Sobic003G284600--Sobic004G074600 Sobic003G040700 Sobic003G040700 Sobic003G284600--Sobic003G040700 Sobic002G103800 Sobic002G103800 Sobic003G284600--Sobic002G103800 Sobic004G259300 Sobic004G259300 Sobic007G177500--Sobic004G259300 Sobic004G016100 Sobic004G016100 Sobic007G177500--Sobic004G016100 Sobic004G116600 Sobic004G116600 Sobic007G177500--Sobic004G116600 Sobic003G005100 Sobic003G005100 Sobic007G177500--Sobic003G005100 Sobic007G192400 Sobic007G192400 Sobic007G177500--Sobic007G192400 Sobic004G218300 Sobic004G218300 Sobic007G177500--Sobic004G218300 Sobic007G177500--Sobic007G077532 Sobic001G281700 Sobic001G281700 Sobic007G177500--Sobic001G281700 Sobic006G130200 Sobic006G130200 Sobic007G177500--Sobic006G130200 Sobic004G141400 Sobic004G141400 Sobic007G077532--Sobic004G141400 Sobic001G057400 Sobic001G057400 Sobic007G077532--Sobic001G057400 Sobic007G077532--Sobic007G192400 Sobic004G004100 Sobic004G004100 Sobic007G077532--Sobic004G004100 Sobic005G185500 Sobic005G185500 Sobic007G077532--Sobic005G185500 Sobic010G181600 Sobic010G181600 Sobic007G077532--Sobic010G181600 Sobic003G353700 Sobic003G353700 Sobic007G077532--Sobic003G353700 Sobic008G006000 Sobic008G006000 Sobic007G077532--Sobic008G006000 Sobic003G117800 Sobic003G117800 Sobic007G077532--Sobic003G117800
Octagon: transcription factors


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