Gene annotation
Transcriptome id Sobic.005G211301.1
Synonym -
Functional annotation -
UniProt A0A1Z5RJS6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G165000 LSD1 zinc finger domain containing protein, expressed -
2 Sobic.009G011700 protein kinase APK1A, chloroplast precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
3 Sobic.003G332401 - K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
4 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37
5 Sobic.008G180900 YIF1B, putative, expressed -
6 Sobic.004G231400 OsAPRL3 adenosine 5\'-phosphosulfate reductase-like OsAPRL3, expressed -
7 Sobic.004G016800 protein kinase family protein, putative, expressed -
8 Sobic.001G225100 expressed protein -
9 Sobic.006G254600 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
10 Sobic.001G035500 expressed protein -
11 Sobic.001G281700 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
12 Sobic.004G320000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.004G203100 SNF7 domain containing protein, putative, expressed K12195: CHMP6, charged multivesicular body protein 6
14 Sobic.004G034400 plant-specific domain TIGR01589 family protein, putative, expressed -
15 Sobic.009G237600 transcription factor, putative, expressed K09060: plant G-box-binding factor
16 Sobic.003G311700 cyclase/dehydrase family protein, expressed K18588: coenzyme Q-binding protein COQ10
17 Sobic.010G243400 expressed protein -
18 Sobic.003G379700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Increased expression in phyB-1 mutant(PubMedID : 26893475)@No apical meristem protein, putative, expressed -
19 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
20 Sobic.001G109500 OsFBX85 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic005G211301 Sobic005G211301 Sobic008G165000 Sobic008G165000 Sobic005G211301--Sobic008G165000 Sobic009G011700 Sobic009G011700 Sobic005G211301--Sobic009G011700 Sobic003G332401 Sobic003G332401 Sobic005G211301--Sobic003G332401 Sobic001G478300 Sobic001G478300 Sobic005G211301--Sobic001G478300 Sobic008G180900 Sobic008G180900 Sobic005G211301--Sobic008G180900 Sobic004G231400 Sobic004G231400 Sobic005G211301--Sobic004G231400 Sobic004G016800 Sobic004G016800 Sobic005G211301--Sobic004G016800 Sobic001G225100 Sobic001G225100 Sobic005G211301--Sobic001G225100 Sobic006G254600 Sobic006G254600 Sobic005G211301--Sobic006G254600 Sobic010G243400 Sobic010G243400 Sobic008G165000--Sobic010G243400 Sobic008G165000--Sobic006G254600 Sobic001G489700 Sobic001G489700 Sobic008G165000--Sobic001G489700 Sobic002G378200 Sobic002G378200 Sobic008G165000--Sobic002G378200 Sobic001G085500 Sobic001G085500 Sobic008G165000--Sobic001G085500 Sobic004G094300 Sobic004G094300 Sobic008G165000--Sobic004G094300 Sobic002G040700 Sobic002G040700 Sobic008G165000--Sobic002G040700 Sobic001G512400 Sobic001G512400 Sobic008G165000--Sobic001G512400 Sobic001G522900 Sobic001G522900 Sobic008G165000--Sobic001G522900 Sobic009G011700--Sobic001G478300 Sobic009G011700--Sobic008G180900 Sobic001G076000 Sobic001G076000 Sobic009G011700--Sobic001G076000 Sobic001G427800 Sobic001G427800 Sobic009G011700--Sobic001G427800 Sobic009G011700--Sobic004G231400 Sobic004G049100 Sobic004G049100 Sobic009G011700--Sobic004G049100 Sobic001G371300 Sobic001G371300 Sobic009G011700--Sobic001G371300 Sobic009G237600 Sobic009G237600 Sobic009G011700--Sobic009G237600 Sobic010G071200 Sobic010G071200 Sobic009G011700--Sobic010G071200 Sobic002G296300 Sobic002G296300 Sobic003G332401--Sobic002G296300 Sobic003G115800 Sobic003G115800 Sobic003G332401--Sobic003G115800 Sobic003G311700 Sobic003G311700 Sobic003G332401--Sobic003G311700 Sobic009G246950 Sobic009G246950 Sobic003G332401--Sobic009G246950 Sobic007G186300 Sobic007G186300 Sobic003G332401--Sobic007G186300 Sobic002G090700 Sobic002G090700 Sobic003G332401--Sobic002G090700 Sobic003G007500 Sobic003G007500 Sobic003G332401--Sobic003G007500 Sobic001G054200 Sobic001G054200 Sobic003G332401--Sobic001G054200 Sobic002G368400 Sobic002G368400 Sobic003G332401--Sobic002G368400 Sobic001G478300--Sobic004G231400 Sobic001G478300--Sobic010G071200 Sobic006G209500 Sobic006G209500 Sobic001G478300--Sobic006G209500 Sobic001G478300--Sobic001G427800 Sobic001G149700 Sobic001G149700 Sobic001G478300--Sobic001G149700 Sobic010G055500 Sobic010G055500 Sobic001G478300--Sobic010G055500 Sobic004G263900 Sobic004G263900 Sobic001G478300--Sobic004G263900 Sobic003G273100 Sobic003G273100 Sobic001G478300--Sobic003G273100 Sobic004G274700 Sobic004G274700 Sobic001G478300--Sobic004G274700 Sobic008G180900--Sobic009G246950 Sobic010G168600 Sobic010G168600 Sobic008G180900--Sobic010G168600 Sobic009G171700 Sobic009G171700 Sobic008G180900--Sobic009G171700 Sobic009G193400 Sobic009G193400 Sobic008G180900--Sobic009G193400 Sobic002G352700 Sobic002G352700 Sobic008G180900--Sobic002G352700 Sobic008G180900--Sobic001G478300 Sobic002G256300 Sobic002G256300 Sobic008G180900--Sobic002G256300 Sobic010G083700 Sobic010G083700 Sobic008G180900--Sobic010G083700 Sobic004G203100 Sobic004G203100 Sobic008G180900--Sobic004G203100 Sobic004G231400--Sobic010G055500 Sobic004G231400--Sobic010G071200 Sobic004G231400--Sobic001G478300 Sobic004G231400--Sobic001G149700 Sobic004G231400--Sobic004G274700 Sobic006G088100 Sobic006G088100 Sobic004G231400--Sobic006G088100 Sobic006G257900 Sobic006G257900 Sobic004G231400--Sobic006G257900 Sobic004G150400 Sobic004G150400 Sobic004G231400--Sobic004G150400 Sobic004G231400--Sobic006G209500 Sobic005G110520 Sobic005G110520 Sobic004G016800--Sobic005G110520 Sobic006G241300 Sobic006G241300 Sobic004G016800--Sobic006G241300 Sobic003G137400 Sobic003G137400 Sobic004G016800--Sobic003G137400 Sobic001G311000 Sobic001G311000 Sobic004G016800--Sobic001G311000 Sobic001G326900 Sobic001G326900 Sobic004G016800--Sobic001G326900 Sobic001G056700 Sobic001G056700 Sobic004G016800--Sobic001G056700 Sobic001G281700 Sobic001G281700 Sobic004G016800--Sobic001G281700 Sobic007G177500 Sobic007G177500 Sobic004G016800--Sobic007G177500 Sobic003G408200 Sobic003G408200 Sobic004G016800--Sobic003G408200 Sobic007G150200 Sobic007G150200 Sobic001G225100--Sobic007G150200 Sobic003G296600 Sobic003G296600 Sobic001G225100--Sobic003G296600 Sobic001G247400 Sobic001G247400 Sobic001G225100--Sobic001G247400 Sobic001G032100 Sobic001G032100 Sobic001G225100--Sobic001G032100 Sobic001G225100--Sobic006G257900 Sobic009G183500 Sobic009G183500 Sobic001G225100--Sobic009G183500 Sobic003G093600 Sobic003G093600 Sobic001G225100--Sobic003G093600 Sobic002G284200 Sobic002G284200 Sobic001G225100--Sobic002G284200 Sobic004G221900 Sobic004G221900 Sobic001G225100--Sobic004G221900 Sobic006G254600--Sobic008G165000 Sobic006G092800 Sobic006G092800 Sobic006G254600--Sobic006G092800 Sobic006G254600--Sobic002G378200 Sobic008G192000 Sobic008G192000 Sobic006G254600--Sobic008G192000 Sobic002G084300 Sobic002G084300 Sobic006G254600--Sobic002G084300 Sobic006G254600--Sobic001G522900 Sobic006G254600--Sobic004G231400 Sobic006G254600--Sobic010G071200 Sobic006G254600--Sobic001G085500
Octagon: transcription factors


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