Gene annotation
Transcriptome id Sobic.004G016800.1
Synonym Sb04g001590
Functional annotation protein kinase family protein, putative, expressed
UniProt C5XSY9
Pfam PF07714
Panther DB PTHR23257 PTHR23257:SF471
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G35780 : ACT-like protein tyrosine kinase family protein
RAP-DB (Rice) LOC_Os02g02780.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a018745
Brachypodium KQJ92958
Barley HORVU6Hr1G012800.39 , HORVU6Hr1G012800.38 , HORVU6Hr1G012800.35 , HORVU6Hr1G012800.34 , HORVU6Hr1G012800.37 , HORVU6Hr1G012800.36 , HORVU6Hr1G012800.31 , HORVU6Hr1G012800.30 , HORVU6Hr1G012800.33 , HORVU6Hr1G012800.32 , HORVU6Hr1G012800.22 , HORVU6Hr1G012800.23 , HORVU6Hr1G012800.20 , HORVU6Hr1G012800.26 , HORVU6Hr1G012800.28 , HORVU6Hr1G012800.29 , HORVU2Hr1G108060.1 , HORVU2Hr1G108060.2 , HORVU6Hr1G012800.44 , HORVU6Hr1G012800.45 , HORVU6Hr1G012800.46 , HORVU6Hr1G012800.40 , HORVU6Hr1G012800.41 , HORVU6Hr1G012800.42 , HORVU6Hr1G012800.43 , HORVU6Hr1G012800.9 , HORVU6Hr1G012800.8 , HORVU6Hr1G012800.3 , HORVU6Hr1G012800.2 , HORVU6Hr1G012800.1 , HORVU6Hr1G012800.7 , HORVU6Hr1G012800.6 , HORVU6Hr1G012800.5 , HORVU6Hr1G012800.4 , HORVU3Hr1G111880.27 , HORVU3Hr1G111880.29 , HORVU7Hr1G088720.33 , HORVU6Hr1G012800.21 , HORVU6Hr1G012800.27 , HORVU6Hr1G012800.24 , HORVU6Hr1G012800.25 , HORVU6Hr1G012800.19 , HORVU6Hr1G012800.18 , HORVU6Hr1G012800.13 , HORVU6Hr1G012800.12 , HORVU6Hr1G012800.11 , HORVU6Hr1G012800.10 , HORVU6Hr1G012800.17 , HORVU6Hr1G012800.16 , HORVU6Hr1G012800.15 , HORVU6Hr1G012800.14 , HORVU3Hr1G111880.28
Wheat TraesCS6A02G071900 , TraesCS6D02G070000 , TraesCS6B02G096400
Populus PNT47250 , PNT47251


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G110520 - -
2 Sobic.006G241300 expressed protein -
3 Sobic.003G137400 OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
4 Sobic.001G311000 expansin precursor, putative, expressed -
5 Sobic.001G326900 PPDK(PubMedID : 19549309)@phyruvate phosphate dikinase(PubMedID : 26904072)@-(PubMedID : 26976818)@pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed K01006: pyruvate, orthophosphate dikinase
6 Sobic.001G056700 "O2(rtholog in meize:Hartings et al., 1989)"(PubMedID : 31659831)@bZIP transcription factor domain containing protein, expressed -
7 Sobic.001G281700 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
8 Sobic.007G177500 thaumatin, putative, expressed -
9 Sobic.003G408200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G230700 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
11 Sobic.006G191600 expressed protein -
12 Sobic.006G124000 BTBZ4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed -
13 Sobic.004G282301 - -
14 Sobic.001G471900 C2 domain containing protein, putative, expressed -
15 Sobic.001G225100 expressed protein -
16 Sobic.010G154150 - -
17 Sobic.009G166700 expressed protein -
18 Sobic.003G296600 coiled-coil domain-containing protein 25, putative, expressed -
19 Sobic.007G150200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MTD1, putative, expressed -
20 Sobic.006G184300 OsFBX148 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic004G016800 Sobic004G016800 Sobic005G110520 Sobic005G110520 Sobic004G016800--Sobic005G110520 Sobic006G241300 Sobic006G241300 Sobic004G016800--Sobic006G241300 Sobic003G137400 Sobic003G137400 Sobic004G016800--Sobic003G137400 Sobic001G311000 Sobic001G311000 Sobic004G016800--Sobic001G311000 Sobic001G326900 Sobic001G326900 Sobic004G016800--Sobic001G326900 Sobic001G056700 Sobic001G056700 Sobic004G016800--Sobic001G056700 Sobic001G281700 Sobic001G281700 Sobic004G016800--Sobic001G281700 Sobic007G177500 Sobic007G177500 Sobic004G016800--Sobic007G177500 Sobic003G408200 Sobic003G408200 Sobic004G016800--Sobic003G408200 Sobic002G229250 Sobic002G229250 Sobic005G110520--Sobic002G229250 Sobic002G171500 Sobic002G171500 Sobic005G110520--Sobic002G171500 Sobic005G110520--Sobic003G408200 Sobic006G124000 Sobic006G124000 Sobic005G110520--Sobic006G124000 Sobic005G110520--Sobic006G241300 Sobic005G110520--Sobic004G016800 Sobic001G225100 Sobic001G225100 Sobic005G110520--Sobic001G225100 Sobic005G026800 Sobic005G026800 Sobic005G110520--Sobic005G026800 Sobic007G063700 Sobic007G063700 Sobic005G110520--Sobic007G063700 Sobic003G406900 Sobic003G406900 Sobic006G241300--Sobic003G406900 Sobic006G241300--Sobic003G408200 Sobic004G164500 Sobic004G164500 Sobic006G241300--Sobic004G164500 Sobic006G241300--Sobic005G026800 Sobic003G296600 Sobic003G296600 Sobic006G241300--Sobic003G296600 Sobic002G254200 Sobic002G254200 Sobic006G241300--Sobic002G254200 Sobic002G278300 Sobic002G278300 Sobic006G241300--Sobic002G278300 Sobic003G293900 Sobic003G293900 Sobic006G241300--Sobic003G293900 Sobic006G191600 Sobic006G191600 Sobic006G241300--Sobic006G191600 Sobic003G273100 Sobic003G273100 Sobic003G137400--Sobic003G273100 Sobic008G106800 Sobic008G106800 Sobic003G137400--Sobic008G106800 Sobic004G231400 Sobic004G231400 Sobic003G137400--Sobic004G231400 Sobic004G274700 Sobic004G274700 Sobic003G137400--Sobic004G274700 Sobic001G149700 Sobic001G149700 Sobic003G137400--Sobic001G149700 Sobic001G478300 Sobic001G478300 Sobic003G137400--Sobic001G478300 Sobic006G088100 Sobic006G088100 Sobic003G137400--Sobic006G088100 Sobic010G209501 Sobic010G209501 Sobic003G137400--Sobic010G209501 Sobic005G012000 Sobic005G012000 Sobic003G137400--Sobic005G012000 Sobic001G311000--Sobic004G164500 Sobic009G065000 Sobic009G065000 Sobic001G311000--Sobic009G065000 Sobic001G311000--Sobic006G191600 Sobic007G177100 Sobic007G177100 Sobic001G311000--Sobic007G177100 Sobic003G402300 Sobic003G402300 Sobic001G311000--Sobic003G402300 Sobic007G126100 Sobic007G126100 Sobic001G311000--Sobic007G126100 Sobic001G311000--Sobic008G106800 Sobic006G257900 Sobic006G257900 Sobic001G311000--Sobic006G257900 Sobic001G311000--Sobic003G293900 Sobic003G117000 Sobic003G117000 Sobic001G326900--Sobic003G117000 Sobic003G036950 Sobic003G036950 Sobic001G326900--Sobic003G036950 Sobic002G284200 Sobic002G284200 Sobic001G326900--Sobic002G284200 Sobic010G218100 Sobic010G218100 Sobic001G326900--Sobic010G218100 Sobic007G150200 Sobic007G150200 Sobic001G326900--Sobic007G150200 Sobic002G082900 Sobic002G082900 Sobic001G326900--Sobic002G082900 Sobic005G117901 Sobic005G117901 Sobic001G326900--Sobic005G117901 Sobic010G218500 Sobic010G218500 Sobic001G326900--Sobic010G218500 Sobic001G222300 Sobic001G222300 Sobic001G326900--Sobic001G222300 Sobic001G471900 Sobic001G471900 Sobic001G056700--Sobic001G471900 Sobic002G291300 Sobic002G291300 Sobic001G056700--Sobic002G291300 Sobic010G228600 Sobic010G228600 Sobic001G056700--Sobic010G228600 Sobic010G144400 Sobic010G144400 Sobic001G056700--Sobic010G144400 Sobic001G056700--Sobic004G164500 Sobic001G082400 Sobic001G082400 Sobic001G056700--Sobic001G082400 Sobic001G371300 Sobic001G371300 Sobic001G056700--Sobic001G371300 Sobic001G056700--Sobic003G273100 Sobic001G056700--Sobic002G278300 Sobic001G206000 Sobic001G206000 Sobic001G281700--Sobic001G206000 Sobic002G088700 Sobic002G088700 Sobic001G281700--Sobic002G088700 Sobic001G281700--Sobic001G149700 Sobic007G115900 Sobic007G115900 Sobic001G281700--Sobic007G115900 Sobic010G071200 Sobic010G071200 Sobic001G281700--Sobic010G071200 Sobic010G055500 Sobic010G055500 Sobic001G281700--Sobic010G055500 Sobic001G281700--Sobic006G257900 Sobic009G032300 Sobic009G032300 Sobic001G281700--Sobic009G032300 Sobic006G254600 Sobic006G254600 Sobic001G281700--Sobic006G254600 Sobic004G259300 Sobic004G259300 Sobic007G177500--Sobic004G259300 Sobic004G016100 Sobic004G016100 Sobic007G177500--Sobic004G016100 Sobic004G116600 Sobic004G116600 Sobic007G177500--Sobic004G116600 Sobic003G005100 Sobic003G005100 Sobic007G177500--Sobic003G005100 Sobic007G192400 Sobic007G192400 Sobic007G177500--Sobic007G192400 Sobic004G218300 Sobic004G218300 Sobic007G177500--Sobic004G218300 Sobic007G077532 Sobic007G077532 Sobic007G177500--Sobic007G077532 Sobic007G177500--Sobic001G281700 Sobic006G130200 Sobic006G130200 Sobic007G177500--Sobic006G130200 Sobic003G408200--Sobic006G241300 Sobic003G408200--Sobic003G296600 Sobic002G330700 Sobic002G330700 Sobic003G408200--Sobic002G330700 Sobic003G408200--Sobic005G026800 Sobic010G154150 Sobic010G154150 Sobic003G408200--Sobic010G154150 Sobic001G247400 Sobic001G247400 Sobic003G408200--Sobic001G247400 Sobic003G408200--Sobic001G471900 Sobic003G408200--Sobic001G056700 Sobic004G157300 Sobic004G157300 Sobic003G408200--Sobic004G157300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.