Gene annotation
Transcriptome id Sobic.001G044500.2
Synonym Sb01g004100
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
transporter-related, putative, expressed
UniProt A0A1Z5S4D5
Pfam PF07690
Panther DB PTHR23505 PTHR23505:SF7
NCBI CDD KOG1330; Sugar transporter/spinster transmembrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G36790 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os03g59450.1 : transporter-related, putative, expressed
MaizeGDB (Corn) Zm00025a045386 , Zm00025a008695
Brachypodium KQK20385 , KQK12553
Barley HORVU1Hr1G044930.3 , HORVU1Hr1G044930.2 , HORVU1Hr1G044930.1 , HORVU1Hr1G044930.7 , HORVU1Hr1G044930.6 , HORVU1Hr1G044930.5 , HORVU1Hr1G044930.4 , HORVU5Hr1G022850.2 , HORVU5Hr1G022850.4 , HORVU5Hr1G022850.8 , HORVU5Hr1G022850.9 , HORVU5Hr1G022850.6 , HORVU5Hr1G022850.11 , HORVU5Hr1G110390.2
Wheat TraesCS5A02G461400 , TraesCS1B02G186900 , TraesCS5B02G471600 , TraesCS5D02G474100 , TraesCS1A02G170200 , TraesCS1A02G170200 , TraesCS1D02G167900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G235600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
2 Sobic.010G043200 OsMAPK6(Ortholog in rice:Liu et al. (2015))(PubMedID : 31659928)@CGMC_MAPKCMGC_2_ERK.12 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14512: mitogen-activated protein kinase 6
3 Sobic.004G192800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@mitochondrial prohibitin complex protein 1, putative, expressed K17080: prohibitin 1
4 Sobic.007G106900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoribonuclease Dicer, putative, expressed -
5 Sobic.001G118300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@GLTP domain containing protein, putative, expressed -
6 Sobic.009G241000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@3 Ketoacyl CoA synthetase 11 KCS11 (At)(PubMedID : 27208977)@3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
7 Sobic.002G139600 2-phosphoglycerate kinase-related, putative, expressed -
8 Sobic.009G088800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@aminotransferase domain containing protein, putative, expressed K18482: 4-amino-4-deoxychorismate lyase
9 Sobic.001G151800 expressed protein K16275: BAH, E3 ubiquitin-protein ligase BAH
10 Sobic.004G198800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@expressed protein K01113: alkaline phosphatase D
11 Sobic.003G297300 OsFBX24 - F-box domain containing protein, expressed -
12 Sobic.002G423000 zinc finger family protein, putative, expressed -
13 Sobic.003G377000 powdery mildew resistant protein 5, putative, expressed -
14 Sobic.003G308800 transmembrane protein 56, putative, expressed -
15 Sobic.002G322900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
16 Sobic.010G016400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxisomal biogenesis factor 11, putative, expressed -
17 Sobic.001G188900 expressed protein -
18 Sobic.003G196700 esterase/lipase/thioesterase, putative, expressed K06889: uncharacterized protein
19 Sobic.004G347300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
20 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -


Gene co-expression network
sample Sobic001G044500 Sobic001G044500 Sobic009G235600 Sobic009G235600 Sobic001G044500--Sobic009G235600 Sobic010G043200 Sobic010G043200 Sobic001G044500--Sobic010G043200 Sobic004G192800 Sobic004G192800 Sobic001G044500--Sobic004G192800 Sobic007G106900 Sobic007G106900 Sobic001G044500--Sobic007G106900 Sobic001G118300 Sobic001G118300 Sobic001G044500--Sobic001G118300 Sobic009G241000 Sobic009G241000 Sobic001G044500--Sobic009G241000 Sobic002G139600 Sobic002G139600 Sobic001G044500--Sobic002G139600 Sobic009G088800 Sobic009G088800 Sobic001G044500--Sobic009G088800 Sobic001G151800 Sobic001G151800 Sobic001G044500--Sobic001G151800 Sobic010G064600 Sobic010G064600 Sobic009G235600--Sobic010G064600 Sobic001G512800 Sobic001G512800 Sobic009G235600--Sobic001G512800 Sobic003G377000 Sobic003G377000 Sobic009G235600--Sobic003G377000 Sobic006G119200 Sobic006G119200 Sobic009G235600--Sobic006G119200 Sobic001G386400 Sobic001G386400 Sobic009G235600--Sobic001G386400 Sobic010G184300 Sobic010G184300 Sobic009G235600--Sobic010G184300 Sobic006G232000 Sobic006G232000 Sobic009G235600--Sobic006G232000 Sobic006G176600 Sobic006G176600 Sobic009G235600--Sobic006G176600 Sobic001G188900 Sobic001G188900 Sobic009G235600--Sobic001G188900 Sobic010G043200--Sobic001G118300 Sobic002G423000 Sobic002G423000 Sobic010G043200--Sobic002G423000 Sobic010G043200--Sobic009G088800 Sobic003G340700 Sobic003G340700 Sobic010G043200--Sobic003G340700 Sobic010G043200--Sobic001G044500 Sobic006G039600 Sobic006G039600 Sobic010G043200--Sobic006G039600 Sobic005G019100 Sobic005G019100 Sobic010G043200--Sobic005G019100 Sobic003G129900 Sobic003G129900 Sobic010G043200--Sobic003G129900 Sobic004G170400 Sobic004G170400 Sobic010G043200--Sobic004G170400 Sobic002G431000 Sobic002G431000 Sobic004G192800--Sobic002G431000 Sobic004G192800--Sobic002G139600 Sobic004G192800--Sobic009G088800 Sobic005G044300 Sobic005G044300 Sobic004G192800--Sobic005G044300 Sobic001G057600 Sobic001G057600 Sobic004G192800--Sobic001G057600 Sobic004G159000 Sobic004G159000 Sobic004G192800--Sobic004G159000 Sobic004G192800--Sobic001G118300 Sobic004G192800--Sobic003G129900 Sobic003G196600 Sobic003G196600 Sobic004G192800--Sobic003G196600 Sobic001G023200 Sobic001G023200 Sobic007G106900--Sobic001G023200 Sobic002G249000 Sobic002G249000 Sobic007G106900--Sobic002G249000 Sobic006G192700 Sobic006G192700 Sobic007G106900--Sobic006G192700 Sobic001G085900 Sobic001G085900 Sobic007G106900--Sobic001G085900 Sobic008G179500 Sobic008G179500 Sobic007G106900--Sobic008G179500 Sobic009G003900 Sobic009G003900 Sobic007G106900--Sobic009G003900 Sobic003G009100 Sobic003G009100 Sobic007G106900--Sobic003G009100 Sobic006G196200 Sobic006G196200 Sobic007G106900--Sobic006G196200 Sobic001G393800 Sobic001G393800 Sobic007G106900--Sobic001G393800 Sobic001G118300--Sobic005G019100 Sobic001G118300--Sobic006G039600 Sobic004G256700 Sobic004G256700 Sobic001G118300--Sobic004G256700 Sobic010G262300 Sobic010G262300 Sobic001G118300--Sobic010G262300 Sobic001G118300--Sobic003G196600 Sobic010G031000 Sobic010G031000 Sobic001G118300--Sobic010G031000 Sobic004G159400 Sobic004G159400 Sobic001G118300--Sobic004G159400 Sobic001G118300--Sobic004G159000 Sobic003G273000 Sobic003G273000 Sobic001G118300--Sobic003G273000 Sobic004G206401 Sobic004G206401 Sobic009G241000--Sobic004G206401 Sobic002G265300 Sobic002G265300 Sobic009G241000--Sobic002G265300 Sobic004G198800 Sobic004G198800 Sobic009G241000--Sobic004G198800 Sobic009G241000--Sobic003G377000 Sobic009G241000--Sobic002G139600 Sobic009G241000--Sobic002G431000 Sobic009G241000--Sobic001G512800 Sobic001G274800 Sobic001G274800 Sobic009G241000--Sobic001G274800 Sobic004G096700 Sobic004G096700 Sobic009G241000--Sobic004G096700 Sobic002G139600--Sobic003G377000 Sobic002G007800 Sobic002G007800 Sobic002G139600--Sobic002G007800 Sobic002G139600--Sobic002G431000 Sobic002G139600--Sobic004G198800 Sobic002G160100 Sobic002G160100 Sobic002G139600--Sobic002G160100 Sobic001G179800 Sobic001G179800 Sobic002G139600--Sobic001G179800 Sobic002G139600--Sobic004G192800 SobicK043400 SobicK043400 Sobic002G139600--SobicK043400 Sobic003G308800 Sobic003G308800 Sobic002G139600--Sobic003G308800 Sobic009G088800--Sobic001G057600 Sobic009G088800--Sobic005G044300 Sobic009G088800--Sobic004G192800 Sobic009G088800--Sobic001G118300 Sobic009G088800--Sobic004G256700 Sobic009G088800--Sobic002G139600 Sobic009G088800--Sobic003G129900 Sobic009G088800--Sobic002G423000 Sobic003G273900 Sobic003G273900 Sobic009G088800--Sobic003G273900 Sobic009G236200 Sobic009G236200 Sobic001G151800--Sobic009G236200 Sobic002G355200 Sobic002G355200 Sobic001G151800--Sobic002G355200 Sobic007G125900 Sobic007G125900 Sobic001G151800--Sobic007G125900 Sobic003G232900 Sobic003G232900 Sobic001G151800--Sobic003G232900 Sobic003G348400 Sobic003G348400 Sobic001G151800--Sobic003G348400 Sobic004G236600 Sobic004G236600 Sobic001G151800--Sobic004G236600 Sobic005G117400 Sobic005G117400 Sobic001G151800--Sobic005G117400 Sobic006G140000 Sobic006G140000 Sobic001G151800--Sobic006G140000 Sobic009G004200 Sobic009G004200 Sobic001G151800--Sobic009G004200
Octagon: transcription factors


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