Gene annotation
Transcriptome id Sobic.010G043200.1
Synonym Sb10g003810, ATMPK6, ATMAPK6, MPK6, MAPK6
Functional annotation OsMAPK6(Ortholog in rice:Liu et al. (2015)) (PubMedID : 31659928)
CGMC_MAPKCMGC_2_ERK.12 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
UniProt C5Z4D1
Pfam PF00069
Panther DB PTHR24055:SF10 PTHR24055
NCBI CDD -
KEGG Orthology K14512; mitogen-activated protein kinase 6
Gene Ontology GO:0004672; protein kinase activity GO:0005524ATP binding GO:0006468protein phosphorylation


Orthologs (automatic annotation)
TAIR AT2G43790 : MAP kinase 6
RAP-DB (Rice) LOC_Os06g06090.1 : CGMC_MAPKCMGC_2_ERK.12 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
MaizeGDB (Corn) Zm00025a041559 , Zm00025a001942 , Zm00025a049992 , Zm00025a052699
Brachypodium KQK19569
Barley HORVU7Hr1G023760.3 , HORVU7Hr1G023760.2 , HORVU7Hr1G023760.1
Wheat TraesCS7B02G009200 , TraesCS4A02G106400 , TraesCS7D02G106400 , TraesCS7A02G111300
Populus PNT28812


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cDNA sequences
Sobic.010G043200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G118300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@GLTP domain containing protein, putative, expressed -
2 Sobic.002G423000 zinc finger family protein, putative, expressed -
3 Sobic.009G088800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@aminotransferase domain containing protein, putative, expressed K18482: 4-amino-4-deoxychorismate lyase
4 Sobic.003G340700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
5 Sobic.001G044500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transporter-related, putative, expressed -
6 Sobic.006G039600 expressed protein -
7 Sobic.005G019100 TRAF-type zinc finger family protein, expressed -
8 Sobic.003G129900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
9 Sobic.004G170400 ubiquinol-cytochrome C reductase hinge protein, putative, expressed K00416: QCR6, ubiquinol-cytochrome c reductase subunit 6
10 Sobic.004G256700 ZAC, putative, expressed K12486: stromal membrane-associated protein
11 Sobic.002G159300 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
12 Sobic.001G217500 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
13 Sobic.004G273100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@jmjC domain containing protein, expressed -
14 Sobic.004G268200 expressed protein -
15 Sobic.008G006300 prenylated rab acceptor, putative, expressed -
16 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
17 Sobic.003G152900 -(PubMedID : 26976818)@dihydrolipoyl dehydrogenase 1, mitochondrial precursor, putative, expressed K00382: DLD, lpd, dihydrolipoamide dehydrogenase
18 Sobic.002G017600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.005G044300 exo70 exocyst complex subunit, putative, expressed K07195: EXOC7, exocyst complex component 7
20 Sobic.004G173700 SLL1 protein, putative, expressed -


Gene co-expression network
sample Sobic010G043200 Sobic010G043200 Sobic001G118300 Sobic001G118300 Sobic010G043200--Sobic001G118300 Sobic002G423000 Sobic002G423000 Sobic010G043200--Sobic002G423000 Sobic009G088800 Sobic009G088800 Sobic010G043200--Sobic009G088800 Sobic003G340700 Sobic003G340700 Sobic010G043200--Sobic003G340700 Sobic001G044500 Sobic001G044500 Sobic010G043200--Sobic001G044500 Sobic006G039600 Sobic006G039600 Sobic010G043200--Sobic006G039600 Sobic005G019100 Sobic005G019100 Sobic010G043200--Sobic005G019100 Sobic003G129900 Sobic003G129900 Sobic010G043200--Sobic003G129900 Sobic004G170400 Sobic004G170400 Sobic010G043200--Sobic004G170400 Sobic001G118300--Sobic005G019100 Sobic001G118300--Sobic006G039600 Sobic004G256700 Sobic004G256700 Sobic001G118300--Sobic004G256700 Sobic010G262300 Sobic010G262300 Sobic001G118300--Sobic010G262300 Sobic003G196600 Sobic003G196600 Sobic001G118300--Sobic003G196600 Sobic010G031000 Sobic010G031000 Sobic001G118300--Sobic010G031000 Sobic004G159400 Sobic004G159400 Sobic001G118300--Sobic004G159400 Sobic004G159000 Sobic004G159000 Sobic001G118300--Sobic004G159000 Sobic003G273000 Sobic003G273000 Sobic001G118300--Sobic003G273000 Sobic005G044300 Sobic005G044300 Sobic002G423000--Sobic005G044300 Sobic002G423000--Sobic001G118300 Sobic002G423000--Sobic009G088800 Sobic007G212100 Sobic007G212100 Sobic002G423000--Sobic007G212100 Sobic001G217500 Sobic001G217500 Sobic002G423000--Sobic001G217500 Sobic004G173700 Sobic004G173700 Sobic002G423000--Sobic004G173700 Sobic010G216400 Sobic010G216400 Sobic002G423000--Sobic010G216400 Sobic003G218400 Sobic003G218400 Sobic002G423000--Sobic003G218400 Sobic002G423000--Sobic003G129900 Sobic001G057600 Sobic001G057600 Sobic009G088800--Sobic001G057600 Sobic009G088800--Sobic005G044300 Sobic004G192800 Sobic004G192800 Sobic009G088800--Sobic004G192800 Sobic009G088800--Sobic001G118300 Sobic009G088800--Sobic004G256700 Sobic002G139600 Sobic002G139600 Sobic009G088800--Sobic002G139600 Sobic009G088800--Sobic003G129900 Sobic009G088800--Sobic002G423000 Sobic003G273900 Sobic003G273900 Sobic009G088800--Sobic003G273900 Sobic003G340700--Sobic004G159000 Sobic004G030000 Sobic004G030000 Sobic003G340700--Sobic004G030000 Sobic003G340700--Sobic003G196600 Sobic001G031900 Sobic001G031900 Sobic003G340700--Sobic001G031900 Sobic003G152900 Sobic003G152900 Sobic003G340700--Sobic003G152900 Sobic003G340700--Sobic004G170400 Sobic001G350600 Sobic001G350600 Sobic003G340700--Sobic001G350600 Sobic008G102600 Sobic008G102600 Sobic003G340700--Sobic008G102600 Sobic009G112900 Sobic009G112900 Sobic003G340700--Sobic009G112900 Sobic009G235600 Sobic009G235600 Sobic001G044500--Sobic009G235600 Sobic001G044500--Sobic010G043200 Sobic001G044500--Sobic004G192800 Sobic007G106900 Sobic007G106900 Sobic001G044500--Sobic007G106900 Sobic001G044500--Sobic001G118300 Sobic009G241000 Sobic009G241000 Sobic001G044500--Sobic009G241000 Sobic001G044500--Sobic002G139600 Sobic001G044500--Sobic009G088800 Sobic001G151800 Sobic001G151800 Sobic001G044500--Sobic001G151800 Sobic004G273100 Sobic004G273100 Sobic006G039600--Sobic004G273100 Sobic005G058800 Sobic005G058800 Sobic006G039600--Sobic005G058800 Sobic006G039600--Sobic001G118300 Sobic009G069600 Sobic009G069600 Sobic006G039600--Sobic009G069600 Sobic006G039600--Sobic010G031000 Sobic007G016100 Sobic007G016100 Sobic006G039600--Sobic007G016100 Sobic001G508466 Sobic001G508466 Sobic006G039600--Sobic001G508466 Sobic009G128700 Sobic009G128700 Sobic006G039600--Sobic009G128700 Sobic001G533400 Sobic001G533400 Sobic006G039600--Sobic001G533400 Sobic005G019100--Sobic003G129900 Sobic005G019100--Sobic004G256700 Sobic001G387200 Sobic001G387200 Sobic005G019100--Sobic001G387200 Sobic006G120900 Sobic006G120900 Sobic005G019100--Sobic006G120900 Sobic005G019100--Sobic004G173700 Sobic001G518500 Sobic001G518500 Sobic005G019100--Sobic001G518500 Sobic001G408400 Sobic001G408400 Sobic005G019100--Sobic001G408400 Sobic003G137600 Sobic003G137600 Sobic005G019100--Sobic003G137600 Sobic007G219500 Sobic007G219500 Sobic005G019100--Sobic007G219500 Sobic003G129900--Sobic001G387200 Sobic004G093600 Sobic004G093600 Sobic003G129900--Sobic004G093600 Sobic003G129900--Sobic006G120900 Sobic003G129900--Sobic005G019100 Sobic003G129900--Sobic004G173700 Sobic003G129900--Sobic004G256700 Sobic002G420600 Sobic002G420600 Sobic003G129900--Sobic002G420600 Sobic003G034900 Sobic003G034900 Sobic003G129900--Sobic003G034900 Sobic003G129900--Sobic001G518500 Sobic004G170400--Sobic001G350600 Sobic004G259200 Sobic004G259200 Sobic004G170400--Sobic004G259200 Sobic001G074700 Sobic001G074700 Sobic004G170400--Sobic001G074700 Sobic001G465800 Sobic001G465800 Sobic004G170400--Sobic001G465800 Sobic009G119900 Sobic009G119900 Sobic004G170400--Sobic009G119900 Sobic002G356400 Sobic002G356400 Sobic004G170400--Sobic002G356400 Sobic003G209000 Sobic003G209000 Sobic004G170400--Sobic003G209000 Sobic004G310300 Sobic004G310300 Sobic004G170400--Sobic004G310300 Sobic002G418400 Sobic002G418400 Sobic004G170400--Sobic002G418400
Octagon: transcription factors


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