Gene annotation
Transcriptome id Sobic.003G196700.1
Synonym Sb03g025950
Functional annotation esterase/lipase/thioesterase, putative, expressed
UniProt A0A1B6Q4D2
Pfam PF12695
Panther DB PTHR10992 PTHR10992:SF834
NCBI CDD KOG4667; Predicted esterase
KEGG Orthology K06889; uncharacterized protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G47590 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g39790.1 : esterase/lipase/thioesterase, putative, expressed
MaizeGDB (Corn) Zm00025a028491
Brachypodium KQK08429 , KQK08428 , KQK08425 , PNT72252 , PNT72251
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G196700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G315000 expressed protein -
2 Sobic.001G139700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.006G165400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glutamate dehydrogenase protein, putative, expressed K00261: GLUD1_2, glutamate dehydrogenase (NAD(P)+)
4 Sobic.004G286100 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
5 Sobic.004G273100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@jmjC domain containing protein, expressed -
6 Sobic.002G220100 expressed protein -
7 Sobic.004G123000 expressed protein -
8 Sobic.001G322500 trehalase precursor, putative, expressed K01194: TREH, treA, alpha,alpha-trehalase
9 Sobic.009G176500 similar to Putative uncharacterized protein(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
10 Sobic.003G340700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
11 Sobic.005G033100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
12 Sobic.001G282900 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase
13 Sobic.010G216400 expressed protein -
14 Sobic.010G072300 sucrose synthase(PubMedID : 26616172)@"Sh1(Ortholog in maize:Jiang et al., 2013)"(PubMedID : 31659931)@sucrose synthase, putative, expressed K00695: sucrose synthase
15 Sobic.002G034700 similar to Putative uncharacterized protein(PubMedID : 29862293)@CAMK_KIN1/SNF1/Nim1_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
16 Sobic.001G508466 - -
17 Sobic.001G044500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transporter-related, putative, expressed -
18 Sobic.001G118300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@GLTP domain containing protein, putative, expressed -
19 Sobic.002G423000 zinc finger family protein, putative, expressed -
20 Sobic.002G173200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic003G196700 Sobic003G196700 Sobic004G315000 Sobic004G315000 Sobic003G196700--Sobic004G315000 Sobic001G139700 Sobic001G139700 Sobic003G196700--Sobic001G139700 Sobic006G165400 Sobic006G165400 Sobic003G196700--Sobic006G165400 Sobic004G286100 Sobic004G286100 Sobic003G196700--Sobic004G286100 Sobic004G273100 Sobic004G273100 Sobic003G196700--Sobic004G273100 Sobic002G220100 Sobic002G220100 Sobic003G196700--Sobic002G220100 Sobic004G123000 Sobic004G123000 Sobic003G196700--Sobic004G123000 Sobic001G322500 Sobic001G322500 Sobic003G196700--Sobic001G322500 Sobic009G176500 Sobic009G176500 Sobic003G196700--Sobic009G176500 Sobic004G315000--Sobic009G176500 Sobic001G282900 Sobic001G282900 Sobic004G315000--Sobic001G282900 Sobic002G379200 Sobic002G379200 Sobic004G315000--Sobic002G379200 Sobic010G216400 Sobic010G216400 Sobic004G315000--Sobic010G216400 Sobic002G227300 Sobic002G227300 Sobic004G315000--Sobic002G227300 Sobic009G186600 Sobic009G186600 Sobic004G315000--Sobic009G186600 Sobic001G533400 Sobic001G533400 Sobic004G315000--Sobic001G533400 Sobic006G224000 Sobic006G224000 Sobic004G315000--Sobic006G224000 Sobic002G183400 Sobic002G183400 Sobic004G315000--Sobic002G183400 Sobic005G058700 Sobic005G058700 Sobic001G139700--Sobic005G058700 Sobic003G128100 Sobic003G128100 Sobic001G139700--Sobic003G128100 Sobic003G436400 Sobic003G436400 Sobic001G139700--Sobic003G436400 Sobic008G010400 Sobic008G010400 Sobic001G139700--Sobic008G010400 Sobic005G033100 Sobic005G033100 Sobic001G139700--Sobic005G033100 Sobic002G260100 Sobic002G260100 Sobic001G139700--Sobic002G260100 Sobic003G208000 Sobic003G208000 Sobic001G139700--Sobic003G208000 Sobic009G087900 Sobic009G087900 Sobic001G139700--Sobic009G087900 Sobic006G059400 Sobic006G059400 Sobic001G139700--Sobic006G059400 Sobic002G090200 Sobic002G090200 Sobic006G165400--Sobic002G090200 Sobic006G218300 Sobic006G218300 Sobic006G165400--Sobic006G218300 Sobic004G050000 Sobic004G050000 Sobic006G165400--Sobic004G050000 Sobic006G121500 Sobic006G121500 Sobic006G165400--Sobic006G121500 Sobic001G066000 Sobic001G066000 Sobic006G165400--Sobic001G066000 Sobic003G280900 Sobic003G280900 Sobic006G165400--Sobic003G280900 Sobic009G009600 Sobic009G009600 Sobic006G165400--Sobic009G009600 Sobic010G069200 Sobic010G069200 Sobic006G165400--Sobic010G069200 Sobic002G367400 Sobic002G367400 Sobic006G165400--Sobic002G367400 Sobic004G259200 Sobic004G259200 Sobic004G286100--Sobic004G259200 Sobic002G135200 Sobic002G135200 Sobic004G286100--Sobic002G135200 Sobic001G074700 Sobic001G074700 Sobic004G286100--Sobic001G074700 Sobic004G170400 Sobic004G170400 Sobic004G286100--Sobic004G170400 Sobic004G310300 Sobic004G310300 Sobic004G286100--Sobic004G310300 Sobic001G513500 Sobic001G513500 Sobic004G286100--Sobic001G513500 Sobic009G119900 Sobic009G119900 Sobic004G286100--Sobic009G119900 Sobic003G209000 Sobic003G209000 Sobic004G286100--Sobic003G209000 Sobic001G465800 Sobic001G465800 Sobic004G286100--Sobic001G465800 Sobic006G039600 Sobic006G039600 Sobic004G273100--Sobic006G039600 Sobic009G120000 Sobic009G120000 Sobic004G273100--Sobic009G120000 Sobic004G273100--Sobic002G090200 Sobic004G273100--Sobic001G533400 Sobic004G030501 Sobic004G030501 Sobic004G273100--Sobic004G030501 Sobic010G001900 Sobic010G001900 Sobic004G273100--Sobic010G001900 Sobic008G112600 Sobic008G112600 Sobic004G273100--Sobic008G112600 Sobic002G267500 Sobic002G267500 Sobic004G273100--Sobic002G267500 Sobic003G227300 Sobic003G227300 Sobic004G273100--Sobic003G227300 Sobic002G220100--Sobic001G282900 Sobic002G220100--Sobic009G176500 Sobic002G220100--Sobic004G315000 Sobic002G220100--Sobic005G033100 Sobic002G220100--Sobic010G216400 Sobic002G329900 Sobic002G329900 Sobic002G220100--Sobic002G329900 Sobic002G173200 Sobic002G173200 Sobic002G220100--Sobic002G173200 Sobic001G047800 Sobic001G047800 Sobic002G220100--Sobic001G047800 Sobic003G296800 Sobic003G296800 Sobic002G220100--Sobic003G296800 Sobic009G054000 Sobic009G054000 Sobic004G123000--Sobic009G054000 Sobic006G239300 Sobic006G239300 Sobic004G123000--Sobic006G239300 Sobic001G350600 Sobic001G350600 Sobic004G123000--Sobic001G350600 Sobic004G123000--Sobic003G209000 Sobic002G296200 Sobic002G296200 Sobic004G123000--Sobic002G296200 Sobic006G013000 Sobic006G013000 Sobic004G123000--Sobic006G013000 Sobic003G155400 Sobic003G155400 Sobic004G123000--Sobic003G155400 Sobic004G159000 Sobic004G159000 Sobic004G123000--Sobic004G159000 Sobic001G404800 Sobic001G404800 Sobic004G123000--Sobic001G404800 Sobic001G322500--Sobic003G155400 Sobic003G386000 Sobic003G386000 Sobic001G322500--Sobic003G386000 Sobic001G224400 Sobic001G224400 Sobic001G322500--Sobic001G224400 Sobic001G322500--Sobic004G170400 Sobic006G182100 Sobic006G182100 Sobic001G322500--Sobic006G182100 Sobic001G322500--Sobic001G350600 Sobic005G188100 Sobic005G188100 Sobic001G322500--Sobic005G188100 Sobic002G190900 Sobic002G190900 Sobic001G322500--Sobic002G190900 Sobic002G046100 Sobic002G046100 Sobic001G322500--Sobic002G046100 Sobic009G176500--Sobic004G315000 Sobic009G176500--Sobic010G216400 Sobic009G176500--Sobic006G224000 Sobic009G176500--Sobic001G282900 Sobic004G159400 Sobic004G159400 Sobic009G176500--Sobic004G159400 Sobic009G176500--Sobic002G227300 Sobic009G176500--Sobic002G220100 Sobic001G508466 Sobic001G508466 Sobic009G176500--Sobic001G508466 Sobic008G006300 Sobic008G006300 Sobic009G176500--Sobic008G006300
Octagon: transcription factors


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