Gene annotation
Transcriptome id Sobic.006G058500.1
Synonym Sb06g014650
Functional annotation expressed protein
UniProt C5YF90
Pfam PF15630
Panther DB PTHR22980 PTHR22980:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50930 : Histone superfamily protein
RAP-DB (Rice) LOC_Os04g32600.1 : expressed protein
MaizeGDB (Corn) Zm00025a011666
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G277200 zinc knuckle domain containing protein, expressed K10904: TIMELESS-interacting protein
2 Sobic.009G148200 deoxynucleoside kinase family, putative, expressed -
3 Sobic.009G031500 agenet domain containing protein, putative, expressed -
4 Sobic.002G139000 OsFBX237 - F-box domain containing protein, expressed -
5 Sobic.003G436600 expressed protein -
6 Sobic.001G047200 carboxyl-terminal peptidase, putative, expressed -
7 Sobic.002G302600 OsFBX291 - F-box domain containing protein, expressed -
8 Sobic.010G013500 growth-regulating factor, putative, expressed -
9 Sobic.001G065300 GRF zinc finger family protein, expressed -
10 Sobic.009G056300 PHD finger protein, putative, expressed -
11 Sobic.009G253400 hyaluronan/mRNA binding family domain containing protein, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein
12 Sobic.002G017900 tetratricopeptide repeat containing protein, putative, expressed K11291: nuclear autoantigenic sperm protein
13 Sobic.003G098200 expressed protein -
14 Sobic.002G177500 expressed protein -
15 Sobic.002G370400 expressed protein -
16 Sobic.004G199200 expressed protein K10858: DNA mismatch repair protein PMS2
17 Sobic.009G096100 endoribonuclease Dicer, putative, expressed -
18 Sobic.002G110500 expressed protein K14308: NUP54, nuclear pore complex protein Nup54
19 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
20 Sobic.001G235700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@translin, putative, expressed -


Gene co-expression network
sample Sobic006G058500 Sobic006G058500 Sobic010G277200 Sobic010G277200 Sobic006G058500--Sobic010G277200 Sobic009G148200 Sobic009G148200 Sobic006G058500--Sobic009G148200 Sobic009G031500 Sobic009G031500 Sobic006G058500--Sobic009G031500 Sobic002G139000 Sobic002G139000 Sobic006G058500--Sobic002G139000 Sobic003G436600 Sobic003G436600 Sobic006G058500--Sobic003G436600 Sobic001G047200 Sobic001G047200 Sobic006G058500--Sobic001G047200 Sobic002G302600 Sobic002G302600 Sobic006G058500--Sobic002G302600 Sobic010G013500 Sobic010G013500 Sobic006G058500--Sobic010G013500 Sobic001G065300 Sobic001G065300 Sobic006G058500--Sobic001G065300 Sobic007G038700 Sobic007G038700 Sobic010G277200--Sobic007G038700 Sobic003G153900 Sobic003G153900 Sobic010G277200--Sobic003G153900 Sobic010G277200--Sobic009G148200 Sobic004G199200 Sobic004G199200 Sobic010G277200--Sobic004G199200 Sobic001G408300 Sobic001G408300 Sobic010G277200--Sobic001G408300 Sobic008G169400 Sobic008G169400 Sobic010G277200--Sobic008G169400 Sobic007G031300 Sobic007G031300 Sobic010G277200--Sobic007G031300 Sobic006G109400 Sobic006G109400 Sobic010G277200--Sobic006G109400 Sobic003G351900 Sobic003G351900 Sobic010G277200--Sobic003G351900 Sobic006G067700 Sobic006G067700 Sobic009G148200--Sobic006G067700 Sobic003G104100 Sobic003G104100 Sobic009G148200--Sobic003G104100 Sobic010G050700 Sobic010G050700 Sobic009G148200--Sobic010G050700 Sobic009G148200--Sobic004G199200 Sobic009G148200--Sobic010G277200 Sobic001G453500 Sobic001G453500 Sobic009G148200--Sobic001G453500 Sobic002G216600 Sobic002G216600 Sobic009G148200--Sobic002G216600 Sobic009G066400 Sobic009G066400 Sobic009G148200--Sobic009G066400 Sobic001G368300 Sobic001G368300 Sobic009G148200--Sobic001G368300 Sobic004G207000 Sobic004G207000 Sobic009G031500--Sobic004G207000 Sobic001G540700 Sobic001G540700 Sobic009G031500--Sobic001G540700 Sobic006G126600 Sobic006G126600 Sobic009G031500--Sobic006G126600 Sobic007G125700 Sobic007G125700 Sobic009G031500--Sobic007G125700 Sobic001G487200 Sobic001G487200 Sobic009G031500--Sobic001G487200 Sobic003G274400 Sobic003G274400 Sobic009G031500--Sobic003G274400 Sobic003G077500 Sobic003G077500 Sobic009G031500--Sobic003G077500 Sobic004G206300 Sobic004G206300 Sobic009G031500--Sobic004G206300 Sobic003G027800 Sobic003G027800 Sobic009G031500--Sobic003G027800 Sobic004G027000 Sobic004G027000 Sobic002G139000--Sobic004G027000 Sobic001G422700 Sobic001G422700 Sobic002G139000--Sobic001G422700 Sobic001G217100 Sobic001G217100 Sobic002G139000--Sobic001G217100 Sobic006G167300 Sobic006G167300 Sobic002G139000--Sobic006G167300 Sobic002G139000--Sobic006G067700 Sobic009G056300 Sobic009G056300 Sobic002G139000--Sobic009G056300 Sobic001G296800 Sobic001G296800 Sobic002G139000--Sobic001G296800 Sobic010G217100 Sobic010G217100 Sobic002G139000--Sobic010G217100 Sobic004G225300 Sobic004G225300 Sobic002G139000--Sobic004G225300 Sobic009G163600 Sobic009G163600 Sobic003G436600--Sobic009G163600 Sobic003G425100 Sobic003G425100 Sobic003G436600--Sobic003G425100 Sobic002G177500 Sobic002G177500 Sobic003G436600--Sobic002G177500 Sobic004G027400 Sobic004G027400 Sobic003G436600--Sobic004G027400 Sobic007G059700 Sobic007G059700 Sobic003G436600--Sobic007G059700 Sobic003G436600--Sobic001G368300 Sobic005G088900 Sobic005G088900 Sobic003G436600--Sobic005G088900 Sobic003G361400 Sobic003G361400 Sobic003G436600--Sobic003G361400 Sobic003G436600--Sobic001G453500 Sobic002G311000 Sobic002G311000 Sobic001G047200--Sobic002G311000 Sobic002G142500 Sobic002G142500 Sobic001G047200--Sobic002G142500 Sobic010G135300 Sobic010G135300 Sobic001G047200--Sobic010G135300 Sobic002G377300 Sobic002G377300 Sobic001G047200--Sobic002G377300 Sobic003G096300 Sobic003G096300 Sobic001G047200--Sobic003G096300 Sobic001G482300 Sobic001G482300 Sobic001G047200--Sobic001G482300 Sobic003G420800 Sobic003G420800 Sobic001G047200--Sobic003G420800 Sobic001G157100 Sobic001G157100 Sobic001G047200--Sobic001G157100 Sobic001G047200--Sobic009G148200 Sobic002G302600--Sobic001G540700 Sobic002G302600--Sobic004G207000 Sobic006G272800 Sobic006G272800 Sobic002G302600--Sobic006G272800 Sobic001G468000 Sobic001G468000 Sobic002G302600--Sobic001G468000 Sobic002G284100 Sobic002G284100 Sobic002G302600--Sobic002G284100 Sobic002G302600--Sobic006G126600 Sobic009G006900 Sobic009G006900 Sobic002G302600--Sobic009G006900 Sobic002G302600--Sobic009G031500 Sobic007G197100 Sobic007G197100 Sobic002G302600--Sobic007G197100 Sobic009G000600 Sobic009G000600 Sobic010G013500--Sobic009G000600 Sobic010G013500--Sobic004G199200 Sobic006G022400 Sobic006G022400 Sobic010G013500--Sobic006G022400 Sobic002G223300 Sobic002G223300 Sobic010G013500--Sobic002G223300 Sobic002G284400 Sobic002G284400 Sobic010G013500--Sobic002G284400 Sobic001G290500 Sobic001G290500 Sobic010G013500--Sobic001G290500 Sobic001G372900 Sobic001G372900 Sobic010G013500--Sobic001G372900 Sobic006G281900 Sobic006G281900 Sobic010G013500--Sobic006G281900 Sobic005G120600 Sobic005G120600 Sobic010G013500--Sobic005G120600 Sobic002G050500 Sobic002G050500 Sobic001G065300--Sobic002G050500 Sobic006G022500 Sobic006G022500 Sobic001G065300--Sobic006G022500 Sobic009G011500 Sobic009G011500 Sobic001G065300--Sobic009G011500 Sobic001G065300--Sobic006G022400 Sobic002G060450 Sobic002G060450 Sobic001G065300--Sobic002G060450 Sobic001G384600 Sobic001G384600 Sobic001G065300--Sobic001G384600 Sobic001G065300--Sobic002G223300 Sobic010G173900 Sobic010G173900 Sobic001G065300--Sobic010G173900 Sobic005G177900 Sobic005G177900 Sobic001G065300--Sobic005G177900
Octagon: transcription factors


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