Gene annotation
Transcriptome id Sobic.006G073900.2,Sobic.006G073900.1,Sobic.006G073900.3
Synonym Sb06g016130
Functional annotation HVA22, putative, expressed
UniProt A0A1B6PKS4 , C5YG94 , A0A1Z5RD67
Pfam PF03134
Panther DB PTHR12300 PTHR12300:SF55
NCBI CDD -
KEGG Orthology K17338; receptor expression-enhancing protein 1/2/3/4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42560 : Abscisic acid-responsive (TB2/DP1, HVA22) family protein
RAP-DB (Rice) LOC_Os04g33880.1 : HVA22, putative, expressed
MaizeGDB (Corn) Zm00025a056008
Brachypodium KQJ82543 , KQJ82542
Barley HORVU2Hr1G073410.5 , HORVU2Hr1G073410.4 , HORVU2Hr1G073410.7 , HORVU2Hr1G073410.6 , HORVU2Hr1G073410.1 , HORVU2Hr1G073410.3 , HORVU2Hr1G073410.2 , HORVU2Hr1G073410.9 , HORVU2Hr1G073410.8 , HORVU2Hr1G073410.20 , HORVU2Hr1G073410.21 , HORVU2Hr1G073410.11 , HORVU2Hr1G073410.10 , HORVU2Hr1G073410.13 , HORVU2Hr1G073410.12 , HORVU2Hr1G073410.15 , HORVU2Hr1G073410.14 , HORVU2Hr1G073410.17 , HORVU2Hr1G073410.16 , HORVU2Hr1G073410.19 , HORVU2Hr1G073410.18
Wheat TraesCS2A02G296800 , TraesCS2A02G296800 , TraesCS2D02G294700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G445100 RNA recognition motif containing protein, putative, expressed K13195: cold-inducible RNA-binding protein
2 Sobic.007G194700 phosphoribulokinase/Uridine kinase family protein, expressed K00876: udk, uridine kinase
3 Sobic.001G072800 expressed protein -
4 Sobic.003G075000 expressed protein -
5 Sobic.003G385700 - -
6 Sobic.001G024500 uncharacterized Cys-rich domain containing protein, putative, expressed -
7 Sobic.007G171950 - -
8 Sobic.006G010800 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
9 Sobic.002G367700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
10 Sobic.001G169700 ZOS3-14 - C2H2 zinc finger protein, expressed -
11 Sobic.006G201700 wall-associated kinase 1, putative, expressed -
12 Sobic.010G067700 expressed protein -
13 Sobic.004G139000 expressed protein -
14 Sobic.001G098600 expressed protein -
15 Sobic.008G002700 receptor protein kinase CRINKLY4 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
16 Sobic.008G035501 - -
17 Sobic.008G079400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.006G090800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
19 Sobic.007G213300 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
20 Sobic.001G344600 late embryogenesis abundant protein, putative, expressed -


Gene co-expression network
sample Sobic006G073900 Sobic006G073900 Sobic003G445100 Sobic003G445100 Sobic006G073900--Sobic003G445100 Sobic007G194700 Sobic007G194700 Sobic006G073900--Sobic007G194700 Sobic001G072800 Sobic001G072800 Sobic006G073900--Sobic001G072800 Sobic003G075000 Sobic003G075000 Sobic006G073900--Sobic003G075000 Sobic003G385700 Sobic003G385700 Sobic006G073900--Sobic003G385700 Sobic001G024500 Sobic001G024500 Sobic006G073900--Sobic001G024500 Sobic007G171950 Sobic007G171950 Sobic006G073900--Sobic007G171950 Sobic006G010800 Sobic006G010800 Sobic006G073900--Sobic006G010800 Sobic002G367700 Sobic002G367700 Sobic006G073900--Sobic002G367700 Sobic003G383300 Sobic003G383300 Sobic003G445100--Sobic003G383300 Sobic004G175600 Sobic004G175600 Sobic003G445100--Sobic004G175600 Sobic001G532700 Sobic001G532700 Sobic003G445100--Sobic001G532700 Sobic003G445100--Sobic007G171950 Sobic010G005600 Sobic010G005600 Sobic003G445100--Sobic010G005600 Sobic007G225800 Sobic007G225800 Sobic003G445100--Sobic007G225800 Sobic004G296500 Sobic004G296500 Sobic003G445100--Sobic004G296500 Sobic006G059200 Sobic006G059200 Sobic003G445100--Sobic006G059200 Sobic007G201650 Sobic007G201650 Sobic003G445100--Sobic007G201650 Sobic009G146800 Sobic009G146800 Sobic007G194700--Sobic009G146800 Sobic004G236300 Sobic004G236300 Sobic007G194700--Sobic004G236300 Sobic004G272300 Sobic004G272300 Sobic007G194700--Sobic004G272300 Sobic007G194700--Sobic003G075000 Sobic009G198500 Sobic009G198500 Sobic007G194700--Sobic009G198500 Sobic006G100600 Sobic006G100600 Sobic007G194700--Sobic006G100600 Sobic001G314500 Sobic001G314500 Sobic007G194700--Sobic001G314500 Sobic001G087900 Sobic001G087900 Sobic007G194700--Sobic001G087900 Sobic004G130100 Sobic004G130100 Sobic007G194700--Sobic004G130100 Sobic006G269000 Sobic006G269000 Sobic001G072800--Sobic006G269000 Sobic008G118900 Sobic008G118900 Sobic001G072800--Sobic008G118900 Sobic001G004700 Sobic001G004700 Sobic001G072800--Sobic001G004700 Sobic006G168400 Sobic006G168400 Sobic001G072800--Sobic006G168400 Sobic004G083300 Sobic004G083300 Sobic001G072800--Sobic004G083300 Sobic001G072800--Sobic003G075000 Sobic007G213300 Sobic007G213300 Sobic001G072800--Sobic007G213300 Sobic003G291400 Sobic003G291400 Sobic001G072800--Sobic003G291400 Sobic001G072800--Sobic007G171950 Sobic003G075000--Sobic001G024500 Sobic001G131400 Sobic001G131400 Sobic003G075000--Sobic001G131400 Sobic003G075000--Sobic006G100600 Sobic003G075000--Sobic007G194700 Sobic002G345850 Sobic002G345850 Sobic003G075000--Sobic002G345850 Sobic005G107300 Sobic005G107300 Sobic003G075000--Sobic005G107300 Sobic003G075000--Sobic001G087900 Sobic003G075000--Sobic001G072800 Sobic002G066400 Sobic002G066400 Sobic003G075000--Sobic002G066400 Sobic004G201400 Sobic004G201400 Sobic003G385700--Sobic004G201400 Sobic008G036350 Sobic008G036350 Sobic003G385700--Sobic008G036350 Sobic010G128000 Sobic010G128000 Sobic003G385700--Sobic010G128000 Sobic001G344600 Sobic001G344600 Sobic003G385700--Sobic001G344600 Sobic001G169200 Sobic001G169200 Sobic003G385700--Sobic001G169200 Sobic001G435500 Sobic001G435500 Sobic003G385700--Sobic001G435500 Sobic003G163700 Sobic003G163700 Sobic003G385700--Sobic003G163700 Sobic001G260850 Sobic001G260850 Sobic003G385700--Sobic001G260850 Sobic007G220700 Sobic007G220700 Sobic003G385700--Sobic007G220700 Sobic001G093900 Sobic001G093900 Sobic001G024500--Sobic001G093900 Sobic008G002700 Sobic008G002700 Sobic001G024500--Sobic008G002700 Sobic001G024500--Sobic007G220700 Sobic002G376000 Sobic002G376000 Sobic001G024500--Sobic002G376000 Sobic010G179800 Sobic010G179800 Sobic001G024500--Sobic010G179800 Sobic001G024500--Sobic003G075000 Sobic001G075000 Sobic001G075000 Sobic001G024500--Sobic001G075000 Sobic005G161100 Sobic005G161100 Sobic001G024500--Sobic005G161100 Sobic001G182600 Sobic001G182600 Sobic001G024500--Sobic001G182600 Sobic008G067100 Sobic008G067100 Sobic007G171950--Sobic008G067100 Sobic001G096300 Sobic001G096300 Sobic007G171950--Sobic001G096300 Sobic007G095500 Sobic007G095500 Sobic007G171950--Sobic007G095500 Sobic002G122600 Sobic002G122600 Sobic007G171950--Sobic002G122600 Sobic001G296400 Sobic001G296400 Sobic007G171950--Sobic001G296400 Sobic010G108900 Sobic010G108900 Sobic007G171950--Sobic010G108900 Sobic009G207100 Sobic009G207100 Sobic007G171950--Sobic009G207100 Sobic001G263000 Sobic001G263000 Sobic007G171950--Sobic001G263000 Sobic003G265500 Sobic003G265500 Sobic007G171950--Sobic003G265500 Sobic010G241300 Sobic010G241300 Sobic006G010800--Sobic010G241300 Sobic009G190500 Sobic009G190500 Sobic006G010800--Sobic009G190500 Sobic001G240800 Sobic001G240800 Sobic006G010800--Sobic001G240800 Sobic006G010800--Sobic007G213300 Sobic010G225600 Sobic010G225600 Sobic006G010800--Sobic010G225600 Sobic007G129201 Sobic007G129201 Sobic006G010800--Sobic007G129201 Sobic009G084500 Sobic009G084500 Sobic006G010800--Sobic009G084500 Sobic009G034600 Sobic009G034600 Sobic006G010800--Sobic009G034600 Sobic007G059500 Sobic007G059500 Sobic006G010800--Sobic007G059500 Sobic006G241350 Sobic006G241350 Sobic002G367700--Sobic006G241350 Sobic003G123300 Sobic003G123300 Sobic002G367700--Sobic003G123300 Sobic001G078900 Sobic001G078900 Sobic002G367700--Sobic001G078900 Sobic006G051100 Sobic006G051100 Sobic002G367700--Sobic006G051100 Sobic001G465100 Sobic001G465100 Sobic002G367700--Sobic001G465100 Sobic004G325900 Sobic004G325900 Sobic002G367700--Sobic004G325900 Sobic002G016300 Sobic002G016300 Sobic002G367700--Sobic002G016300 Sobic007G028700 Sobic007G028700 Sobic002G367700--Sobic007G028700 Sobic006G241400 Sobic006G241400 Sobic002G367700--Sobic006G241400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.