Gene annotation
Transcriptome id Sobic.004G139000.1
Synonym Sb04g016950
Functional annotation expressed protein
UniProt C5Y122
Pfam -
Panther DB PTHR33320
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57123 : -
RAP-DB (Rice) LOC_Os06g44980.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G247300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
2 Sobic.006G025900 - -
3 Sobic.009G036800 expressed protein -
4 Sobic.004G245200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.007G194700 phosphoribulokinase/Uridine kinase family protein, expressed K00876: udk, uridine kinase
6 Sobic.009G114500 thiamin pyrophosphokinase 1, putative, expressed K00949: thiN, TPK1, thiamine pyrophosphokinase
7 Sobic.001G024500 uncharacterized Cys-rich domain containing protein, putative, expressed -
8 Sobic.001G032000 peptide transporter PTR2, putative, expressed -
9 Sobic.003G290300 expressed protein -
10 Sobic.009G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.002G018400 plant protein of unknown function domain containing protein, expressed -
12 Sobic.003G075000 expressed protein -
13 Sobic.002G066400 OsFBDUF18 - F-box and DUF domain containing protein, expressed -
14 Sobic.003G271201 - -
15 Sobic.006G073900 HVA22, putative, expressed K17338: receptor expression-enhancing protein 1/2/3/4
16 Sobic.010G003700 scarecrow, putative, expressed -
17 Sobic.008G043700 expressed protein -
18 Sobic.003G385700 - -
19 Sobic.003G346800 hypothetical protein -
20 Sobic.002G369800 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -


Gene co-expression network
sample Sobic004G139000 Sobic004G139000 Sobic010G247300 Sobic010G247300 Sobic004G139000--Sobic010G247300 Sobic006G025900 Sobic006G025900 Sobic004G139000--Sobic006G025900 Sobic009G036800 Sobic009G036800 Sobic004G139000--Sobic009G036800 Sobic004G245200 Sobic004G245200 Sobic004G139000--Sobic004G245200 Sobic007G194700 Sobic007G194700 Sobic004G139000--Sobic007G194700 Sobic009G114500 Sobic009G114500 Sobic004G139000--Sobic009G114500 Sobic001G024500 Sobic001G024500 Sobic004G139000--Sobic001G024500 Sobic001G032000 Sobic001G032000 Sobic004G139000--Sobic001G032000 Sobic003G290300 Sobic003G290300 Sobic004G139000--Sobic003G290300 Sobic007G115500 Sobic007G115500 Sobic010G247300--Sobic007G115500 Sobic007G058200 Sobic007G058200 Sobic010G247300--Sobic007G058200 Sobic008G060100 Sobic008G060100 Sobic010G247300--Sobic008G060100 Sobic005G175800 Sobic005G175800 Sobic010G247300--Sobic005G175800 Sobic001G108000 Sobic001G108000 Sobic010G247300--Sobic001G108000 Sobic002G415000 Sobic002G415000 Sobic010G247300--Sobic002G415000 Sobic010G102050 Sobic010G102050 Sobic010G247300--Sobic010G102050 Sobic004G121900 Sobic004G121900 Sobic010G247300--Sobic004G121900 Sobic001G189300 Sobic001G189300 Sobic010G247300--Sobic001G189300 Sobic009G038100 Sobic009G038100 Sobic006G025900--Sobic009G038100 Sobic006G025900--Sobic001G189300 Sobic009G121900 Sobic009G121900 Sobic006G025900--Sobic009G121900 Sobic001G052000 Sobic001G052000 Sobic006G025900--Sobic001G052000 Sobic006G026000 Sobic006G026000 Sobic006G025900--Sobic006G026000 Sobic006G025900--Sobic001G032000 Sobic003G341600 Sobic003G341600 Sobic006G025900--Sobic003G341600 Sobic001G280800 Sobic001G280800 Sobic006G025900--Sobic001G280800 Sobic008G036800 Sobic008G036800 Sobic006G025900--Sobic008G036800 Sobic005G107300 Sobic005G107300 Sobic009G036800--Sobic005G107300 Sobic006G206700 Sobic006G206700 Sobic009G036800--Sobic006G206700 Sobic003G325500 Sobic003G325500 Sobic009G036800--Sobic003G325500 Sobic009G036800--Sobic004G245200 Sobic004G179700 Sobic004G179700 Sobic009G036800--Sobic004G179700 Sobic001G093900 Sobic001G093900 Sobic009G036800--Sobic001G093900 Sobic002G369800 Sobic002G369800 Sobic009G036800--Sobic002G369800 Sobic001G353600 Sobic001G353600 Sobic009G036800--Sobic001G353600 Sobic003G075000 Sobic003G075000 Sobic009G036800--Sobic003G075000 Sobic010G160033 Sobic010G160033 Sobic004G245200--Sobic010G160033 Sobic003G110200 Sobic003G110200 Sobic004G245200--Sobic003G110200 Sobic001G234800 Sobic001G234800 Sobic004G245200--Sobic001G234800 Sobic006G009000 Sobic006G009000 Sobic004G245200--Sobic006G009000 Sobic001G225600 Sobic001G225600 Sobic004G245200--Sobic001G225600 Sobic004G233400 Sobic004G233400 Sobic004G245200--Sobic004G233400 Sobic003G102200 Sobic003G102200 Sobic004G245200--Sobic003G102200 Sobic006G113000 Sobic006G113000 Sobic004G245200--Sobic006G113000 Sobic001G195100 Sobic001G195100 Sobic004G245200--Sobic001G195100 Sobic009G146800 Sobic009G146800 Sobic007G194700--Sobic009G146800 Sobic004G236300 Sobic004G236300 Sobic007G194700--Sobic004G236300 Sobic004G272300 Sobic004G272300 Sobic007G194700--Sobic004G272300 Sobic007G194700--Sobic003G075000 Sobic009G198500 Sobic009G198500 Sobic007G194700--Sobic009G198500 Sobic006G100600 Sobic006G100600 Sobic007G194700--Sobic006G100600 Sobic001G314500 Sobic001G314500 Sobic007G194700--Sobic001G314500 Sobic001G087900 Sobic001G087900 Sobic007G194700--Sobic001G087900 Sobic004G130100 Sobic004G130100 Sobic007G194700--Sobic004G130100 Sobic004G151400 Sobic004G151400 Sobic009G114500--Sobic004G151400 Sobic001G131400 Sobic001G131400 Sobic009G114500--Sobic001G131400 Sobic002G073800 Sobic002G073800 Sobic009G114500--Sobic002G073800 Sobic004G196300 Sobic004G196300 Sobic009G114500--Sobic004G196300 Sobic009G062000 Sobic009G062000 Sobic009G114500--Sobic009G062000 Sobic010G237000 Sobic010G237000 Sobic009G114500--Sobic010G237000 Sobic002G335300 Sobic002G335300 Sobic009G114500--Sobic002G335300 Sobic010G018400 Sobic010G018400 Sobic009G114500--Sobic010G018400 Sobic004G293100 Sobic004G293100 Sobic009G114500--Sobic004G293100 Sobic001G024500--Sobic001G093900 Sobic008G002700 Sobic008G002700 Sobic001G024500--Sobic008G002700 Sobic007G220700 Sobic007G220700 Sobic001G024500--Sobic007G220700 Sobic002G376000 Sobic002G376000 Sobic001G024500--Sobic002G376000 Sobic010G179800 Sobic010G179800 Sobic001G024500--Sobic010G179800 Sobic001G024500--Sobic003G075000 Sobic001G075000 Sobic001G075000 Sobic001G024500--Sobic001G075000 Sobic005G161100 Sobic005G161100 Sobic001G024500--Sobic005G161100 Sobic001G182600 Sobic001G182600 Sobic001G024500--Sobic001G182600 Sobic001G032000--Sobic003G290300 Sobic009G023200 Sobic009G023200 Sobic001G032000--Sobic009G023200 Sobic003G082600 Sobic003G082600 Sobic001G032000--Sobic003G082600 Sobic001G032000--Sobic001G234800 Sobic003G202200 Sobic003G202200 Sobic001G032000--Sobic003G202200 Sobic002G405600 Sobic002G405600 Sobic001G032000--Sobic002G405600 Sobic002G345850 Sobic002G345850 Sobic001G032000--Sobic002G345850 Sobic010G204600 Sobic010G204600 Sobic001G032000--Sobic010G204600 Sobic006G206000 Sobic006G206000 Sobic001G032000--Sobic006G206000 Sobic003G290300--Sobic001G032000 Sobic006G157500 Sobic006G157500 Sobic003G290300--Sobic006G157500 Sobic002G328400 Sobic002G328400 Sobic003G290300--Sobic002G328400 Sobic003G265200 Sobic003G265200 Sobic003G290300--Sobic003G265200 Sobic003G290300--Sobic002G405600 Sobic003G290300--Sobic006G206000 Sobic001G481100 Sobic001G481100 Sobic003G290300--Sobic001G481100 Sobic003G290300--Sobic003G202200 Sobic004G212900 Sobic004G212900 Sobic003G290300--Sobic004G212900
Octagon: transcription factors


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