Gene annotation
Transcriptome id Sobic.010G247300.1
Synonym Sb10g028610
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
AAA ATPase, putative, expressed
UniProt A0A194YLB8
Pfam PF00004
Panther DB PTHR23070 PTHR23070:SF41
NCBI CDD -
KEGG Orthology K08900; mitochondrial chaperone BCS1
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT3G28510 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os06g48240.1 : AAA ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a018314 , Zm00025a018315 , Zm00025a004879
Brachypodium KQK15975 , KQK17345 , KQJ98547
Barley HORVU7Hr1G098240.1 , HORVU2Hr1G046240.1 , HORVU2Hr1G046240.2 , HORVU2Hr1G046240.3 , HORVU2Hr1G046310.2 , HORVU2Hr1G046310.3 , HORVU7Hr1G098220.4 , HORVU7Hr1G098220.5 , HORVU7Hr1G098220.6 , HORVU7Hr1G098220.1 , HORVU7Hr1G098220.2 , HORVU7Hr1G098220.3 , HORVU7Hr1G098210.1
Wheat TraesCS2B02G247000 , TraesCS2A02G221700 , TraesCS7D02G417800 , TraesCS2D02G227400 , TraesCS2A02G221500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G115500 plant protein of unknown function domain containing protein, expressed -
2 Sobic.007G058200 - -
3 Sobic.008G060100 - -
4 Sobic.005G175800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@EF hand family protein, putative K02183: calmodulin
5 Sobic.001G108000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@maf, putative, expressed K06287: septum formation protein
6 Sobic.002G415000 POEI49 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
7 Sobic.010G102050 - -
8 Sobic.004G121900 expansin precursor, putative, expressed -
9 Sobic.001G189300 AMP-binding domain containing protein, expressed -
10 Sobic.004G139000 expressed protein -
11 Sobic.003G111100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pathogen-related protein, putative, expressed -
12 Sobic.006G201700 wall-associated kinase 1, putative, expressed -
13 Sobic.001G322100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family protein, putative, expressed -
14 Sobic.006G012200 flavin monooxygenase, putative, expressed K11816: indole-3-pyruvate monooxygenase
15 Sobic.007G194700 phosphoribulokinase/Uridine kinase family protein, expressed K00876: udk, uridine kinase
16 Sobic.008G043700 expressed protein -
17 Sobic.003G228200 cytochrome P450 72A1, putative, expressed -
18 Sobic.002G255200 BHLH transcription factor, putative, expressed -
19 Sobic.003G199600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G318200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, N-terminal domain containing protein, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic010G247300 Sobic010G247300 Sobic007G115500 Sobic007G115500 Sobic010G247300--Sobic007G115500 Sobic007G058200 Sobic007G058200 Sobic010G247300--Sobic007G058200 Sobic008G060100 Sobic008G060100 Sobic010G247300--Sobic008G060100 Sobic005G175800 Sobic005G175800 Sobic010G247300--Sobic005G175800 Sobic001G108000 Sobic001G108000 Sobic010G247300--Sobic001G108000 Sobic002G415000 Sobic002G415000 Sobic010G247300--Sobic002G415000 Sobic010G102050 Sobic010G102050 Sobic010G247300--Sobic010G102050 Sobic004G121900 Sobic004G121900 Sobic010G247300--Sobic004G121900 Sobic001G189300 Sobic001G189300 Sobic010G247300--Sobic001G189300 Sobic003G228200 Sobic003G228200 Sobic007G115500--Sobic003G228200 Sobic002G327300 Sobic002G327300 Sobic007G115500--Sobic002G327300 Sobic001G318200 Sobic001G318200 Sobic007G115500--Sobic001G318200 Sobic007G127100 Sobic007G127100 Sobic007G115500--Sobic007G127100 Sobic002G024000 Sobic002G024000 Sobic007G115500--Sobic002G024000 Sobic009G065300 Sobic009G065300 Sobic007G115500--Sobic009G065300 Sobic003G360200 Sobic003G360200 Sobic007G115500--Sobic003G360200 Sobic003G192100 Sobic003G192100 Sobic007G115500--Sobic003G192100 Sobic005G080200 Sobic005G080200 Sobic007G115500--Sobic005G080200 Sobic001G297400 Sobic001G297400 Sobic007G058200--Sobic001G297400 Sobic001G098600 Sobic001G098600 Sobic007G058200--Sobic001G098600 Sobic003G237600 Sobic003G237600 Sobic007G058200--Sobic003G237600 Sobic005G037300 Sobic005G037300 Sobic007G058200--Sobic005G037300 Sobic009G254600 Sobic009G254600 Sobic007G058200--Sobic009G254600 Sobic004G035700 Sobic004G035700 Sobic007G058200--Sobic004G035700 Sobic001G068400 Sobic001G068400 Sobic007G058200--Sobic001G068400 Sobic001G189100 Sobic001G189100 Sobic007G058200--Sobic001G189100 Sobic004G333150 Sobic004G333150 Sobic008G060100--Sobic004G333150 Sobic004G252400 Sobic004G252400 Sobic008G060100--Sobic004G252400 Sobic003G271500 Sobic003G271500 Sobic008G060100--Sobic003G271500 Sobic001G100700 Sobic001G100700 Sobic008G060100--Sobic001G100700 Sobic009G106800 Sobic009G106800 Sobic008G060100--Sobic009G106800 Sobic005G182500 Sobic005G182500 Sobic008G060100--Sobic005G182500 Sobic010G079600 Sobic010G079600 Sobic008G060100--Sobic010G079600 Sobic004G111800 Sobic004G111800 Sobic008G060100--Sobic004G111800 Sobic003G206900 Sobic003G206900 Sobic008G060100--Sobic003G206900 Sobic005G175800--Sobic001G318200 Sobic005G228700 Sobic005G228700 Sobic005G175800--Sobic005G228700 Sobic007G194700 Sobic007G194700 Sobic005G175800--Sobic007G194700 Sobic005G175800--Sobic005G182500 Sobic005G175800--Sobic010G247300 Sobic005G175800--Sobic008G060100 Sobic005G175800--Sobic005G037300 Sobic004G236300 Sobic004G236300 Sobic005G175800--Sobic004G236300 Sobic005G175800--Sobic010G102050 Sobic006G229100 Sobic006G229100 Sobic001G108000--Sobic006G229100 Sobic004G126700 Sobic004G126700 Sobic001G108000--Sobic004G126700 Sobic007G165400 Sobic007G165400 Sobic001G108000--Sobic007G165400 Sobic003G203600 Sobic003G203600 Sobic001G108000--Sobic003G203600 Sobic003G287200 Sobic003G287200 Sobic001G108000--Sobic003G287200 Sobic006G183900 Sobic006G183900 Sobic001G108000--Sobic006G183900 Sobic002G185800 Sobic002G185800 Sobic001G108000--Sobic002G185800 Sobic007G170300 Sobic007G170300 Sobic001G108000--Sobic007G170300 Sobic010G151200 Sobic010G151200 Sobic001G108000--Sobic010G151200 Sobic003G157700 Sobic003G157700 Sobic002G415000--Sobic003G157700 Sobic003G384700 Sobic003G384700 Sobic002G415000--Sobic003G384700 Sobic009G074500 Sobic009G074500 Sobic002G415000--Sobic009G074500 Sobic010G113100 Sobic010G113100 Sobic002G415000--Sobic010G113100 Sobic002G101400 Sobic002G101400 Sobic002G415000--Sobic002G101400 Sobic003G128800 Sobic003G128800 Sobic002G415000--Sobic003G128800 Sobic005G061200 Sobic005G061200 Sobic002G415000--Sobic005G061200 Sobic002G042200 Sobic002G042200 Sobic002G415000--Sobic002G042200 Sobic004G009500 Sobic004G009500 Sobic002G415000--Sobic004G009500 Sobic001G355600 Sobic001G355600 Sobic010G102050--Sobic001G355600 Sobic010G102050--Sobic007G058200 Sobic004G245300 Sobic004G245300 Sobic010G102050--Sobic004G245300 Sobic002G195100 Sobic002G195100 Sobic010G102050--Sobic002G195100 Sobic010G102050--Sobic001G098600 Sobic010G102050--Sobic003G237600 Sobic010G102050--Sobic005G037300 Sobic010G102050--Sobic001G189100 Sobic007G057300 Sobic007G057300 Sobic004G121900--Sobic007G057300 Sobic008G079800 Sobic008G079800 Sobic004G121900--Sobic008G079800 Sobic006G117100 Sobic006G117100 Sobic004G121900--Sobic006G117100 Sobic008G099300 Sobic008G099300 Sobic004G121900--Sobic008G099300 Sobic004G121900--Sobic002G415000 Sobic004G121900--Sobic003G128800 Sobic004G306900 Sobic004G306900 Sobic004G121900--Sobic004G306900 Sobic002G195600 Sobic002G195600 Sobic004G121900--Sobic002G195600 Sobic006G102300 Sobic006G102300 Sobic004G121900--Sobic006G102300 Sobic001G189300--Sobic002G327300 Sobic004G046200 Sobic004G046200 Sobic001G189300--Sobic004G046200 Sobic010G008400 Sobic010G008400 Sobic001G189300--Sobic010G008400 Sobic003G016100 Sobic003G016100 Sobic001G189300--Sobic003G016100 Sobic006G141700 Sobic006G141700 Sobic001G189300--Sobic006G141700 Sobic002G176100 Sobic002G176100 Sobic001G189300--Sobic002G176100 Sobic003G264600 Sobic003G264600 Sobic001G189300--Sobic003G264600 Sobic009G187200 Sobic009G187200 Sobic001G189300--Sobic009G187200 Sobic003G084400 Sobic003G084400 Sobic001G189300--Sobic003G084400
Octagon: transcription factors


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