Gene annotation
Transcriptome id Sobic.006G106500.1
Synonym Sb06g018940
Functional annotation expressed protein
UniProt C5Y9U3
Pfam -
Panther DB PTHR36726
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g36730.1 : expressed protein
MaizeGDB (Corn) Zm00025a020801 , Zm00025a011122
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G444000 peptide transporter, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
2 Sobic.001G022800 actin, putative, expressed K10355: actin, other eukaryote
3 Sobic.001G480000 OsFBX171 - F-box domain containing protein, expressed -
4 Sobic.001G109300 adenylyl cyclase-associated protein, putative, expressed K17261: CAP1_2, adenylyl cyclase-associated protein
5 Sobic.003G338400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase NAK, putative, expressed -
6 Sobic.003G269700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@SAM dependent carboxyl methyltransferase, putative, expressed -
7 Sobic.008G091728 - -
8 Sobic.006G126400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed -
9 Sobic.009G038501 - -
10 Sobic.008G044000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
11 Sobic.009G004200 MAC/Perforin domain containing protein, putative, expressed -
12 Sobic.004G102400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
13 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
14 Sobic.001G092000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G488500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"OsFBK12(Ortholog in rice:Chen et al., 2013)"(PubMedID : 31659851)@OsFBK12 - F-box domain and kelch repeat containing protein, expressed -
16 Sobic.010G064700 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
17 Sobic.001G251900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed -
18 Sobic.004G341200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
19 Sobic.004G246200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dihydroorotate dihydrogenase protein, putative, expressed K00207: dihydropyrimidine dehydrogenase (NADP+)
20 Sobic.006G114800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A


Gene co-expression network
sample Sobic006G106500 Sobic006G106500 Sobic001G444000 Sobic001G444000 Sobic006G106500--Sobic001G444000 Sobic001G022800 Sobic001G022800 Sobic006G106500--Sobic001G022800 Sobic001G480000 Sobic001G480000 Sobic006G106500--Sobic001G480000 Sobic001G109300 Sobic001G109300 Sobic006G106500--Sobic001G109300 Sobic003G338400 Sobic003G338400 Sobic006G106500--Sobic003G338400 Sobic003G269700 Sobic003G269700 Sobic006G106500--Sobic003G269700 Sobic008G091728 Sobic008G091728 Sobic006G106500--Sobic008G091728 Sobic006G126400 Sobic006G126400 Sobic006G106500--Sobic006G126400 Sobic009G038501 Sobic009G038501 Sobic006G106500--Sobic009G038501 Sobic001G444000--Sobic003G269700 Sobic005G151700 Sobic005G151700 Sobic001G444000--Sobic005G151700 Sobic003G219600 Sobic003G219600 Sobic001G444000--Sobic003G219600 Sobic005G018500 Sobic005G018500 Sobic001G444000--Sobic005G018500 Sobic004G255000 Sobic004G255000 Sobic001G444000--Sobic004G255000 Sobic005G152100 Sobic005G152100 Sobic001G444000--Sobic005G152100 Sobic004G236600 Sobic004G236600 Sobic001G444000--Sobic004G236600 Sobic006G100400 Sobic006G100400 Sobic001G444000--Sobic006G100400 Sobic009G054500 Sobic009G054500 Sobic001G444000--Sobic009G054500 Sobic001G283200 Sobic001G283200 Sobic001G022800--Sobic001G283200 Sobic004G275700 Sobic004G275700 Sobic001G022800--Sobic004G275700 Sobic004G132300 Sobic004G132300 Sobic001G022800--Sobic004G132300 Sobic009G249100 Sobic009G249100 Sobic001G022800--Sobic009G249100 Sobic003G261400 Sobic003G261400 Sobic001G022800--Sobic003G261400 Sobic001G022800--Sobic001G109300 Sobic007G136100 Sobic007G136100 Sobic001G022800--Sobic007G136100 Sobic002G226900 Sobic002G226900 Sobic001G022800--Sobic002G226900 Sobic009G005900 Sobic009G005900 Sobic001G022800--Sobic009G005900 Sobic001G459700 Sobic001G459700 Sobic001G480000--Sobic001G459700 Sobic007G206000 Sobic007G206000 Sobic001G480000--Sobic007G206000 Sobic010G167200 Sobic010G167200 Sobic001G480000--Sobic010G167200 Sobic008G032400 Sobic008G032400 Sobic001G480000--Sobic008G032400 Sobic001G133200 Sobic001G133200 Sobic001G480000--Sobic001G133200 Sobic007G176200 Sobic007G176200 Sobic001G109300--Sobic007G176200 Sobic009G139800 Sobic009G139800 Sobic001G109300--Sobic009G139800 Sobic006G252200 Sobic006G252200 Sobic001G109300--Sobic006G252200 Sobic001G010700 Sobic001G010700 Sobic001G109300--Sobic001G010700 Sobic003G428200 Sobic003G428200 Sobic001G109300--Sobic003G428200 Sobic003G330500 Sobic003G330500 Sobic001G109300--Sobic003G330500 Sobic001G281900 Sobic001G281900 Sobic001G109300--Sobic001G281900 Sobic001G458700 Sobic001G458700 Sobic001G109300--Sobic001G458700 Sobic009G067000 Sobic009G067000 Sobic001G109300--Sobic009G067000 Sobic004G102400 Sobic004G102400 Sobic003G338400--Sobic004G102400 Sobic003G348400 Sobic003G348400 Sobic003G338400--Sobic003G348400 Sobic004G341200 Sobic004G341200 Sobic003G338400--Sobic004G341200 Sobic009G167700 Sobic009G167700 Sobic003G338400--Sobic009G167700 Sobic010G016400 Sobic010G016400 Sobic003G338400--Sobic010G016400 Sobic001G003000 Sobic001G003000 Sobic003G338400--Sobic001G003000 Sobic001G158500 Sobic001G158500 Sobic003G338400--Sobic001G158500 Sobic006G140000 Sobic006G140000 Sobic003G338400--Sobic006G140000 Sobic001G089800 Sobic001G089800 Sobic003G338400--Sobic001G089800 Sobic003G269700--Sobic004G255000 Sobic001G412700 Sobic001G412700 Sobic003G269700--Sobic001G412700 Sobic009G029600 Sobic009G029600 Sobic003G269700--Sobic009G029600 Sobic001G483500 Sobic001G483500 Sobic003G269700--Sobic001G483500 Sobic003G269700--Sobic003G219600 Sobic003G269700--Sobic005G151700 Sobic003G269700--Sobic006G100400 Sobic010G170550 Sobic010G170550 Sobic003G269700--Sobic010G170550 Sobic003G259200 Sobic003G259200 Sobic003G269700--Sobic003G259200 Sobic010G098100 Sobic010G098100 Sobic008G091728--Sobic010G098100 Sobic008G091728--Sobic001G483500 Sobic001G280200 Sobic001G280200 Sobic008G091728--Sobic001G280200 Sobic008G091728--Sobic001G444000 Sobic008G091728--Sobic003G269700 Sobic008G091728--Sobic005G151700 SobicK030700 SobicK030700 Sobic008G091728--SobicK030700 Sobic008G091728--Sobic003G219600 Sobic001G212000 Sobic001G212000 Sobic008G091728--Sobic001G212000 Sobic003G441100 Sobic003G441100 Sobic006G126400--Sobic003G441100 Sobic010G016800 Sobic010G016800 Sobic006G126400--Sobic010G016800 Sobic001G251900 Sobic001G251900 Sobic006G126400--Sobic001G251900 Sobic004G006966 Sobic004G006966 Sobic006G126400--Sobic004G006966 Sobic001G101400 Sobic001G101400 Sobic006G126400--Sobic001G101400 Sobic008G144500 Sobic008G144500 Sobic009G038501--Sobic008G144500 Sobic009G038501--Sobic004G236600 Sobic004G236000 Sobic004G236000 Sobic009G038501--Sobic004G236000 Sobic003G360900 Sobic003G360900 Sobic009G038501--Sobic003G360900 Sobic009G038501--Sobic001G251900 Sobic009G038501--Sobic005G152100 Sobic009G038501--Sobic001G212000 Sobic007G178100 Sobic007G178100 Sobic009G038501--Sobic007G178100 Sobic009G236200 Sobic009G236200 Sobic009G038501--Sobic009G236200
Octagon: transcription factors


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