Gene annotation
Transcriptome id Sobic.006G147200.1
Synonym Sb06g022590
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
MazG nucleotide pyrophosphohydrolase domain containing protein, expressed
UniProt C5YC31
Pfam PF03819
Panther DB PTHR14552 PTHR14552:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G25400 : -
RAP-DB (Rice) LOC_Os04g43550.1 : MazG nucleotide pyrophosphohydrolase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a010697 , Zm00025a056508
Brachypodium KQJ83572
Barley HORVU2Hr1G089130.3 , HORVU2Hr1G089130.2 , HORVU2Hr1G089130.1
Wheat TraesCS2D02G379600 , TraesCS2A02G383300 , TraesCS2B02G400500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G216800 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
2 Sobic.002G361700 expressed protein -
3 Sobic.009G247700 WRKY111, expressed -
4 Sobic.002G196350 - K14011: UBXN6, UBX domain-containing protein 6
5 Sobic.004G212300 determined the crystal structures of SbHCT in its apo-form and ternary complex with shikimate and p-coumaroyl-CoA(PubMedID : 23624856)@"shikimate hydroxycinnamoyl transferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
6 Sobic.009G232900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
7 Sobic.009G234000 expressed protein -
8 Sobic.007G009100 dehydrogenase, putative, expressed -
9 Sobic.001G106400 serine esterase family protein, putative, expressed K10606: FANCL, E3 ubiquitin-protein ligase FANCL
10 Sobic.008G186600 ergosterol biosynthetic protein 28, putative, expressed -
11 Sobic.006G013000 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
12 Sobic.003G248400 WRKY16, expressed -
13 Sobic.004G063500 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
14 Sobic.005G211400 cytochrome P450, putative, expressed -
15 Sobic.002G040600 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
16 Sobic.009G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
17 Sobic.009G241700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
18 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
19 Sobic.001G353300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
20 Sobic.008G161000 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic006G147200 Sobic006G147200 Sobic009G216800 Sobic009G216800 Sobic006G147200--Sobic009G216800 Sobic002G361700 Sobic002G361700 Sobic006G147200--Sobic002G361700 Sobic009G247700 Sobic009G247700 Sobic006G147200--Sobic009G247700 Sobic002G196350 Sobic002G196350 Sobic006G147200--Sobic002G196350 Sobic004G212300 Sobic004G212300 Sobic006G147200--Sobic004G212300 Sobic009G232900 Sobic009G232900 Sobic006G147200--Sobic009G232900 Sobic009G234000 Sobic009G234000 Sobic006G147200--Sobic009G234000 Sobic007G009100 Sobic007G009100 Sobic006G147200--Sobic007G009100 Sobic001G106400 Sobic001G106400 Sobic006G147200--Sobic001G106400 Sobic002G372400 Sobic002G372400 Sobic009G216800--Sobic002G372400 Sobic002G348100 Sobic002G348100 Sobic009G216800--Sobic002G348100 Sobic003G078200 Sobic003G078200 Sobic009G216800--Sobic003G078200 Sobic002G251900 Sobic002G251900 Sobic009G216800--Sobic002G251900 Sobic008G186600 Sobic008G186600 Sobic009G216800--Sobic008G186600 Sobic004G055700 Sobic004G055700 Sobic009G216800--Sobic004G055700 Sobic006G136800 Sobic006G136800 Sobic009G216800--Sobic006G136800 Sobic001G403500 Sobic001G403500 Sobic009G216800--Sobic001G403500 Sobic003G109600 Sobic003G109600 Sobic009G216800--Sobic003G109600 Sobic006G156000 Sobic006G156000 Sobic002G361700--Sobic006G156000 Sobic001G418900 Sobic001G418900 Sobic002G361700--Sobic001G418900 Sobic002G361700--Sobic004G212300 Sobic002G257300 Sobic002G257300 Sobic002G361700--Sobic002G257300 Sobic003G443300 Sobic003G443300 Sobic002G361700--Sobic003G443300 Sobic009G238900 Sobic009G238900 Sobic002G361700--Sobic009G238900 Sobic003G219800 Sobic003G219800 Sobic002G361700--Sobic003G219800 Sobic004G138800 Sobic004G138800 Sobic002G361700--Sobic004G138800 Sobic001G505500 Sobic001G505500 Sobic002G361700--Sobic001G505500 Sobic002G040600 Sobic002G040600 Sobic009G247700--Sobic002G040600 Sobic009G247700--Sobic006G136800 Sobic010G027300 Sobic010G027300 Sobic009G247700--Sobic010G027300 Sobic006G158400 Sobic006G158400 Sobic009G247700--Sobic006G158400 Sobic007G204700 Sobic007G204700 Sobic009G247700--Sobic007G204700 Sobic004G117600 Sobic004G117600 Sobic009G247700--Sobic004G117600 Sobic002G213600 Sobic002G213600 Sobic009G247700--Sobic002G213600 Sobic002G393600 Sobic002G393600 Sobic009G247700--Sobic002G393600 Sobic003G363900 Sobic003G363900 Sobic009G247700--Sobic003G363900 Sobic010G213400 Sobic010G213400 Sobic002G196350--Sobic010G213400 Sobic006G062800 Sobic006G062800 Sobic002G196350--Sobic006G062800 Sobic004G026200 Sobic004G026200 Sobic002G196350--Sobic004G026200 Sobic003G063200 Sobic003G063200 Sobic002G196350--Sobic003G063200 Sobic005G028700 Sobic005G028700 Sobic002G196350--Sobic005G028700 Sobic008G185400 Sobic008G185400 Sobic002G196350--Sobic008G185400 Sobic009G129000 Sobic009G129000 Sobic002G196350--Sobic009G129000 Sobic002G046100 Sobic002G046100 Sobic002G196350--Sobic002G046100 Sobic009G033700 Sobic009G033700 Sobic002G196350--Sobic009G033700 Sobic010G052200 Sobic010G052200 Sobic004G212300--Sobic010G052200 Sobic001G532200 Sobic001G532200 Sobic004G212300--Sobic001G532200 Sobic003G119500 Sobic003G119500 Sobic004G212300--Sobic003G119500 Sobic004G062500 Sobic004G062500 Sobic004G212300--Sobic004G062500 Sobic001G084100 Sobic001G084100 Sobic004G212300--Sobic001G084100 Sobic001G516600 Sobic001G516600 Sobic004G212300--Sobic001G516600 Sobic004G212300--Sobic006G156000 Sobic004G212300--Sobic002G040600 Sobic010G252500 Sobic010G252500 Sobic004G212300--Sobic010G252500 Sobic005G168100 Sobic005G168100 Sobic009G232900--Sobic005G168100 Sobic001G432000 Sobic001G432000 Sobic009G232900--Sobic001G432000 Sobic003G150000 Sobic003G150000 Sobic009G232900--Sobic003G150000 Sobic010G204500 Sobic010G204500 Sobic009G232900--Sobic010G204500 Sobic002G296200 Sobic002G296200 Sobic009G232900--Sobic002G296200 Sobic007G134900 Sobic007G134900 Sobic009G232900--Sobic007G134900 Sobic009G232900--Sobic003G063200 Sobic010G251600 Sobic010G251600 Sobic009G232900--Sobic010G251600 Sobic001G128400 Sobic001G128400 Sobic009G232900--Sobic001G128400 Sobic010G175900 Sobic010G175900 Sobic009G234000--Sobic010G175900 Sobic004G306300 Sobic004G306300 Sobic009G234000--Sobic004G306300 Sobic009G234000--Sobic005G028700 Sobic004G259600 Sobic004G259600 Sobic009G234000--Sobic004G259600 Sobic006G100700 Sobic006G100700 Sobic009G234000--Sobic006G100700 Sobic002G202100 Sobic002G202100 Sobic009G234000--Sobic002G202100 Sobic009G234000--Sobic003G063200 Sobic004G247200 Sobic004G247200 Sobic009G234000--Sobic004G247200 Sobic009G234000--Sobic005G168100 Sobic007G078100 Sobic007G078100 Sobic007G009100--Sobic007G078100 Sobic001G201100 Sobic001G201100 Sobic007G009100--Sobic001G201100 Sobic010G080500 Sobic010G080500 Sobic007G009100--Sobic010G080500 Sobic004G276100 Sobic004G276100 Sobic007G009100--Sobic004G276100 Sobic001G010400 Sobic001G010400 Sobic007G009100--Sobic001G010400 Sobic004G166500 Sobic004G166500 Sobic007G009100--Sobic004G166500 Sobic002G231600 Sobic002G231600 Sobic007G009100--Sobic002G231600 Sobic010G072300 Sobic010G072300 Sobic007G009100--Sobic010G072300 Sobic004G069200 Sobic004G069200 Sobic007G009100--Sobic004G069200 Sobic004G067900 Sobic004G067900 Sobic001G106400--Sobic004G067900 Sobic002G308400 Sobic002G308400 Sobic001G106400--Sobic002G308400 Sobic006G096300 Sobic006G096300 Sobic001G106400--Sobic006G096300 Sobic006G066600 Sobic006G066600 Sobic001G106400--Sobic006G066600 Sobic001G106400--Sobic002G393600 Sobic010G168200 Sobic010G168200 Sobic001G106400--Sobic010G168200 Sobic009G232800 Sobic009G232800 Sobic001G106400--Sobic009G232800 Sobic004G102900 Sobic004G102900 Sobic001G106400--Sobic004G102900 Sobic009G070200 Sobic009G070200 Sobic001G106400--Sobic009G070200
Octagon: transcription factors


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