Gene annotation
Transcriptome id Sobic.006G253400.1
Synonym
Functional annotation expressed protein
UniProt C6JS86 , A0A1B6PNV1
Pfam -
Panther DB PTHR22939 PTHR22939:SF96
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g06814.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G253400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G250000 - -
2 Sobic.005G025700 RNA recognition motif containing protein, putative, expressed K13093: HIV Tat-specific factor 1
3 Sobic.007G071950 - -
4 Sobic.003G205501 - -
5 Sobic.010G245000 DTW domain containing protein, putative, expressed -
6 Sobic.010G225226 - -
7 Sobic.006G128800 expressed protein -
8 Sobic.007G089600 OsGrx_S15.1 - glutaredoxin subgroup II, expressed -
9 Sobic.004G204200 EMB2423, putative, expressed K11137: TELO2, telomere length regulation protein
10 Sobic.005G001900 - -
11 Sobic.003G056100 transcription initiation factor, putative, expressed K03129: transcription initiation factor TFIID subunit 4
12 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
13 Sobic.001G176200 FHA domain containing protein, putative, expressed K13216: PPP1R8, nuclear inhibitor of protein phosphatase 1
14 Sobic.006G045700 - -
15 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
16 Sobic.006G072900 hydrolase, putative, expressed -
17 Sobic.003G008500 VHS and GAT domain containing protein, expressed -
18 Sobic.004G132150 - -
19 Sobic.010G164350 - -
20 Sobic.003G012500 expressed protein -


Gene co-expression network
sample Sobic006G253400 Sobic006G253400 Sobic006G250000 Sobic006G250000 Sobic006G253400--Sobic006G250000 Sobic005G025700 Sobic005G025700 Sobic006G253400--Sobic005G025700 Sobic007G071950 Sobic007G071950 Sobic006G253400--Sobic007G071950 Sobic003G205501 Sobic003G205501 Sobic006G253400--Sobic003G205501 Sobic010G245000 Sobic010G245000 Sobic006G253400--Sobic010G245000 Sobic010G225226 Sobic010G225226 Sobic006G253400--Sobic010G225226 Sobic006G128800 Sobic006G128800 Sobic006G253400--Sobic006G128800 Sobic007G089600 Sobic007G089600 Sobic006G253400--Sobic007G089600 Sobic004G204200 Sobic004G204200 Sobic006G253400--Sobic004G204200 Sobic006G250000--Sobic006G253400 Sobic003G087400 Sobic003G087400 Sobic006G250000--Sobic003G087400 Sobic002G144966 Sobic002G144966 Sobic006G250000--Sobic002G144966 Sobic006G250000--Sobic010G225226 Sobic006G250000--Sobic004G204200 Sobic004G039700 Sobic004G039700 Sobic006G250000--Sobic004G039700 Sobic009G104201 Sobic009G104201 Sobic006G250000--Sobic009G104201 Sobic010G028800 Sobic010G028800 Sobic006G250000--Sobic010G028800 Sobic003G056100 Sobic003G056100 Sobic006G250000--Sobic003G056100 Sobic003G008500 Sobic003G008500 Sobic005G025700--Sobic003G008500 Sobic001G155000 Sobic001G155000 Sobic005G025700--Sobic001G155000 Sobic007G217000 Sobic007G217000 Sobic005G025700--Sobic007G217000 Sobic006G173100 Sobic006G173100 Sobic005G025700--Sobic006G173100 Sobic007G118600 Sobic007G118600 Sobic005G025700--Sobic007G118600 Sobic002G370900 Sobic002G370900 Sobic005G025700--Sobic002G370900 Sobic008G067600 Sobic008G067600 Sobic005G025700--Sobic008G067600 Sobic002G310200 Sobic002G310200 Sobic005G025700--Sobic002G310200 Sobic001G452000 Sobic001G452000 Sobic005G025700--Sobic001G452000 Sobic007G072000 Sobic007G072000 Sobic007G071950--Sobic007G072000 Sobic009G117400 Sobic009G117400 Sobic007G071950--Sobic009G117400 Sobic008G055432 Sobic008G055432 Sobic007G071950--Sobic008G055432 Sobic009G040700 Sobic009G040700 Sobic007G071950--Sobic009G040700 Sobic001G464200 Sobic001G464200 Sobic007G071950--Sobic001G464200 Sobic006G009400 Sobic006G009400 Sobic007G071950--Sobic006G009400 Sobic010G263800 Sobic010G263800 Sobic007G071950--Sobic010G263800 Sobic005G141801 Sobic005G141801 Sobic007G071950--Sobic005G141801 Sobic004G256600 Sobic004G256600 Sobic007G071950--Sobic004G256600 Sobic001G408700 Sobic001G408700 Sobic003G205501--Sobic001G408700 Sobic003G205501--Sobic006G128800 Sobic004G345700 Sobic004G345700 Sobic003G205501--Sobic004G345700 Sobic006G267300 Sobic006G267300 Sobic003G205501--Sobic006G267300 Sobic010G202600 Sobic010G202600 Sobic003G205501--Sobic010G202600 Sobic003G205501--Sobic010G245000 Sobic008G127400 Sobic008G127400 Sobic003G205501--Sobic008G127400 Sobic008G058800 Sobic008G058800 Sobic003G205501--Sobic008G058800 Sobic003G248500 Sobic003G248500 Sobic003G205501--Sobic003G248500 Sobic002G056701 Sobic002G056701 Sobic010G245000--Sobic002G056701 Sobic001G176200 Sobic001G176200 Sobic010G245000--Sobic001G176200 Sobic010G245000--Sobic004G345700 Sobic004G084300 Sobic004G084300 Sobic010G245000--Sobic004G084300 Sobic005G154500 Sobic005G154500 Sobic010G245000--Sobic005G154500 Sobic002G264200 Sobic002G264200 Sobic010G245000--Sobic002G264200 Sobic008G173100 Sobic008G173100 Sobic010G245000--Sobic008G173100 Sobic003G241200 Sobic003G241200 Sobic010G245000--Sobic003G241200 Sobic002G260400 Sobic002G260400 Sobic010G245000--Sobic002G260400 Sobic001G272532 Sobic001G272532 Sobic010G225226--Sobic001G272532 Sobic010G225226--Sobic009G104201 Sobic003G020000 Sobic003G020000 Sobic010G225226--Sobic003G020000 Sobic001G288301 Sobic001G288301 Sobic010G225226--Sobic001G288301 Sobic007G178700 Sobic007G178700 Sobic010G225226--Sobic007G178700 Sobic010G225226--Sobic003G087400 Sobic004G007100 Sobic004G007100 Sobic010G225226--Sobic004G007100 Sobic003G176400 Sobic003G176400 Sobic010G225226--Sobic003G176400 Sobic010G225226--Sobic002G144966 Sobic006G128800--Sobic003G205501 Sobic010G174800 Sobic010G174800 Sobic006G128800--Sobic010G174800 Sobic004G349900 Sobic004G349900 Sobic006G128800--Sobic004G349900 Sobic002G157300 Sobic002G157300 Sobic006G128800--Sobic002G157300 Sobic003G261300 Sobic003G261300 Sobic006G128800--Sobic003G261300 Sobic006G128800--Sobic003G248500 Sobic006G130200 Sobic006G130200 Sobic006G128800--Sobic006G130200 Sobic001G514000 Sobic001G514000 Sobic006G128800--Sobic001G514000 Sobic006G128800--Sobic003G008500 Sobic007G142050 Sobic007G142050 Sobic007G089600--Sobic007G142050 Sobic010G139301 Sobic010G139301 Sobic007G089600--Sobic010G139301 Sobic004G169501 Sobic004G169501 Sobic007G089600--Sobic004G169501 Sobic008G068800 Sobic008G068800 Sobic007G089600--Sobic008G068800 Sobic003G315332 Sobic003G315332 Sobic007G089600--Sobic003G315332 Sobic009G104300 Sobic009G104300 Sobic007G089600--Sobic009G104300 Sobic001G272000 Sobic001G272000 Sobic007G089600--Sobic001G272000 SobicK009900 SobicK009900 Sobic007G089600--SobicK009900 Sobic005G001900 Sobic005G001900 Sobic007G089600--Sobic005G001900 Sobic002G158700 Sobic002G158700 Sobic004G204200--Sobic002G158700 Sobic004G204200--Sobic002G310200 Sobic001G474600 Sobic001G474600 Sobic004G204200--Sobic001G474600 Sobic004G204200--Sobic008G067600 Sobic001G311500 Sobic001G311500 Sobic004G204200--Sobic001G311500 Sobic008G014500 Sobic008G014500 Sobic004G204200--Sobic008G014500 Sobic004G204200--Sobic003G056100 Sobic002G275600 Sobic002G275600 Sobic004G204200--Sobic002G275600 Sobic001G167200 Sobic001G167200 Sobic004G204200--Sobic001G167200
Octagon: transcription factors


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