Gene annotation
Transcriptome id Sobic.007G060700.2,Sobic.007G060700.1
Synonym Sb07g004820, ATCOAB, COAB
Functional annotation phosphopantothenate--cysteine ligase, putative, expressed
UniProt C5YHW1
Pfam PF04127
Panther DB PTHR12290 PTHR12290:SF17
NCBI CDD KOG2728; Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase
KEGG Orthology K01922; PPCS, phosphopantothenate---cysteine ligase (ATP)
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G12350 : 4-phospho-panto-thenoylcysteine synthetase
RAP-DB (Rice) LOC_Os08g07880.1 : phosphopantothenate--cysteine ligase, putative, expressed
MaizeGDB (Corn) Zm00025a054999
Brachypodium -
Barley -
Wheat TraesCS7A02G521200
Populus -


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cDNA sequences
Sobic.007G060700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G431000 transporter, putative, expressed -
2 Sobic.010G261600 ubiquitin interaction motif family protein, expressed -
3 Sobic.003G087000 expressed protein -
4 Sobic.010G064600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LIM domain-containing protein, putative, expressed -
5 Sobic.003G338500 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
6 Sobic.003G156400 OsPDIL2-2 protein disulfide isomerase PDIL2-2, expressed K09584: PDIA6, protein disulfide-isomerase A6
7 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
8 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
9 Sobic.006G232000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
10 Sobic.010G184300 glycosyltransferase family protein, putative, expressed K00771: protein xylosyltransferase
11 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
12 Sobic.005G139400 SNARE associated Golgi protein, putative, expressed -
13 Sobic.009G224000 OsQSOXL1 quiescin-sulfhydryl oxidase-like OsQSOXL1, expressed K10758: thiol oxidase
14 Sobic.002G295700 transporter family protein, putative, expressed -
15 Sobic.005G090300 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
16 Sobic.002G426300 actin, putative, expressed K17260: ACTR2, actin-related protein 2
17 Sobic.001G220900 adaptin ear-binding coat-associated protein 2, putative, expressed -
18 Sobic.005G059600 WD domain, G-beta repeat domain containing protein, expressed -
19 Sobic.005G177700 transmembrane protein 49, putative, expressed -
20 Sobic.006G114400 OsGrx_S15.2 - glutaredoxin subgroup II, expressed K07390: grxD, monothiol glutaredoxin


Gene co-expression network
sample Sobic007G060700 Sobic007G060700 Sobic002G431000 Sobic002G431000 Sobic007G060700--Sobic002G431000 Sobic010G261600 Sobic010G261600 Sobic007G060700--Sobic010G261600 Sobic003G087000 Sobic003G087000 Sobic007G060700--Sobic003G087000 Sobic010G064600 Sobic010G064600 Sobic007G060700--Sobic010G064600 Sobic003G338500 Sobic003G338500 Sobic007G060700--Sobic003G338500 Sobic003G156400 Sobic003G156400 Sobic007G060700--Sobic003G156400 Sobic007G173700 Sobic007G173700 Sobic007G060700--Sobic007G173700 Sobic008G129600 Sobic008G129600 Sobic007G060700--Sobic008G129600 Sobic006G232000 Sobic006G232000 Sobic007G060700--Sobic006G232000 Sobic010G184300 Sobic010G184300 Sobic002G431000--Sobic010G184300 Sobic002G295700 Sobic002G295700 Sobic002G431000--Sobic002G295700 Sobic003G377000 Sobic003G377000 Sobic002G431000--Sobic003G377000 Sobic001G457700 Sobic001G457700 Sobic002G431000--Sobic001G457700 Sobic004G236200 Sobic004G236200 Sobic002G431000--Sobic004G236200 Sobic005G177700 Sobic005G177700 Sobic002G431000--Sobic005G177700 Sobic004G112900 Sobic004G112900 Sobic002G431000--Sobic004G112900 Sobic007G056100 Sobic007G056100 Sobic002G431000--Sobic007G056100 Sobic002G431000--Sobic010G064600 Sobic010G261600--Sobic003G338500 Sobic002G303600 Sobic002G303600 Sobic010G261600--Sobic002G303600 Sobic002G008800 Sobic002G008800 Sobic010G261600--Sobic002G008800 Sobic004G228800 Sobic004G228800 Sobic010G261600--Sobic004G228800 Sobic004G323700 Sobic004G323700 Sobic010G261600--Sobic004G323700 Sobic002G262900 Sobic002G262900 Sobic010G261600--Sobic002G262900 Sobic009G228700 Sobic009G228700 Sobic010G261600--Sobic009G228700 Sobic004G275700 Sobic004G275700 Sobic010G261600--Sobic004G275700 Sobic010G020400 Sobic010G020400 Sobic010G261600--Sobic010G020400 Sobic003G087000--Sobic010G064600 Sobic003G087000--Sobic010G261600 Sobic006G114400 Sobic006G114400 Sobic003G087000--Sobic006G114400 Sobic008G093000 Sobic008G093000 Sobic003G087000--Sobic008G093000 Sobic007G075500 Sobic007G075500 Sobic003G087000--Sobic007G075500 Sobic009G225000 Sobic009G225000 Sobic003G087000--Sobic009G225000 Sobic003G087000--Sobic004G228800 Sobic003G312200 Sobic003G312200 Sobic003G087000--Sobic003G312200 Sobic009G139800 Sobic009G139800 Sobic003G087000--Sobic009G139800 Sobic010G064600--Sobic003G087000 Sobic010G064600--Sobic008G093000 Sobic010G064600--Sobic010G261600 Sobic010G064600--Sobic004G228800 Sobic010G064600--Sobic010G184300 Sobic006G281800 Sobic006G281800 Sobic010G064600--Sobic006G281800 Sobic009G072700 Sobic009G072700 Sobic010G064600--Sobic009G072700 Sobic001G089800 Sobic001G089800 Sobic010G064600--Sobic001G089800 Sobic001G003000 Sobic001G003000 Sobic010G064600--Sobic001G003000 Sobic010G223300 Sobic010G223300 Sobic003G338500--Sobic010G223300 Sobic003G338500--Sobic010G261600 Sobic003G338500--Sobic010G020400 Sobic003G338500--Sobic004G275700 Sobic008G055900 Sobic008G055900 Sobic003G338500--Sobic008G055900 Sobic009G192000 Sobic009G192000 Sobic003G338500--Sobic009G192000 Sobic009G224000 Sobic009G224000 Sobic003G338500--Sobic009G224000 Sobic001G049400 Sobic001G049400 Sobic003G338500--Sobic001G049400 Sobic003G338500--Sobic002G008800 Sobic001G047600 Sobic001G047600 Sobic003G156400--Sobic001G047600 Sobic006G012700 Sobic006G012700 Sobic003G156400--Sobic006G012700 Sobic001G205100 Sobic001G205100 Sobic003G156400--Sobic001G205100 Sobic008G097900 Sobic008G097900 Sobic003G156400--Sobic008G097900 Sobic008G171400 Sobic008G171400 Sobic003G156400--Sobic008G171400 Sobic008G168200 Sobic008G168200 Sobic003G156400--Sobic008G168200 Sobic001G253300 Sobic001G253300 Sobic003G156400--Sobic001G253300 Sobic001G389200 Sobic001G389200 Sobic003G156400--Sobic001G389200 Sobic003G365100 Sobic003G365100 Sobic003G156400--Sobic003G365100 Sobic002G029300 Sobic002G029300 Sobic007G173700--Sobic002G029300 Sobic004G000100 Sobic004G000100 Sobic007G173700--Sobic004G000100 Sobic001G023100 Sobic001G023100 Sobic007G173700--Sobic001G023100 Sobic001G193100 Sobic001G193100 Sobic007G173700--Sobic001G193100 Sobic001G161700 Sobic001G161700 Sobic007G173700--Sobic001G161700 Sobic001G061200 Sobic001G061200 Sobic007G173700--Sobic001G061200 Sobic002G141700 Sobic002G141700 Sobic007G173700--Sobic002G141700 Sobic007G173700--Sobic001G049400 Sobic003G394200 Sobic003G394200 Sobic007G173700--Sobic003G394200 Sobic008G129600--Sobic008G055900 Sobic007G177300 Sobic007G177300 Sobic008G129600--Sobic007G177300 Sobic006G056200 Sobic006G056200 Sobic008G129600--Sobic006G056200 Sobic008G103300 Sobic008G103300 Sobic008G129600--Sobic008G103300 Sobic010G264000 Sobic010G264000 Sobic008G129600--Sobic010G264000 Sobic001G467100 Sobic001G467100 Sobic008G129600--Sobic001G467100 Sobic001G449900 Sobic001G449900 Sobic008G129600--Sobic001G449900 Sobic003G182300 Sobic003G182300 Sobic008G129600--Sobic003G182300 Sobic006G270600 Sobic006G270600 Sobic008G129600--Sobic006G270600 Sobic009G238800 Sobic009G238800 Sobic006G232000--Sobic009G238800 Sobic003G009300 Sobic003G009300 Sobic006G232000--Sobic003G009300 Sobic006G148200 Sobic006G148200 Sobic006G232000--Sobic006G148200 Sobic001G077900 Sobic001G077900 Sobic006G232000--Sobic001G077900 Sobic003G270600 Sobic003G270600 Sobic006G232000--Sobic003G270600 Sobic004G010900 Sobic004G010900 Sobic006G232000--Sobic004G010900 Sobic006G232000--Sobic010G261600 Sobic006G232000--Sobic010G064600 Sobic002G294200 Sobic002G294200 Sobic006G232000--Sobic002G294200
Octagon: transcription factors


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