Gene annotation
Transcriptome id Sobic.007G118100.1
Synonym
Functional annotation -
UniProt A0A1B6PHD5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G118100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G000300 transmembrane BAX inhibitor motif-containing protein, putative, expressed -
2 Sobic.010G037400 RNA recognition motif containing protein, putative, expressed -
3 Sobic.007G166400 mediator of RNA polymerase II transcription subunit 31, putative, expressed K15153: MED31, mediator of RNA polymerase II transcription subunit 31
4 Sobic.002G347000 WD domain, G-beta repeat domain containing protein, expressed K14963: WDR5, SWD3, COMPASS component SWD3
5 Sobic.007G167900 signal peptide peptidase domain containing protein, expressed K09598: signal peptide peptidase-like 3
6 Sobic.009G049300 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.001G497900 XS domain containing protein, expressed -
8 Sobic.007G189000 WTG1(Ortholog in rice:Wang et al. (2017))(PubMedID : 31659909)@ubiquitin thioesterase otubain-like, putative, expressed K09602: ubiquitin thioesterase protein OTUB1
9 Sobic.007G166100 no apical meristem protein, putative, expressed -
10 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
11 Sobic.007G159500 uncharacterized protein, YigZ family, putative, expressed -
12 Sobic.002G398000 SFT2, putative, expressed -
13 Sobic.003G273400 glycylpeptide N-tetradecanoyltransferase 1, putative, expressed K00671: glycylpeptide N-tetradecanoyltransferase
14 Sobic.001G067400 arv1, putative, expressed -
15 Sobic.002G034600 zinc ion binding protein, putative, expressed -
16 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
17 Sobic.010G027600 transcription factor TFIIF, putative, expressed K11341: YEATS4, GAS41, YEATS domain-containing protein 4
18 Sobic.002G059300 OsFBX181 - F-box domain containing protein, expressed -
19 Sobic.001G207500 ZOS10-06 - C2H2 zinc finger protein, expressed K15685: E3 ubiquitin-protein ligase Hakai
20 Sobic.001G009300 Der1-like family domain containing protein, expressed K13989: Derlin-2/3


Gene co-expression network
sample Sobic007G118100 Sobic007G118100 Sobic010G000300 Sobic010G000300 Sobic007G118100--Sobic010G000300 Sobic010G037400 Sobic010G037400 Sobic007G118100--Sobic010G037400 Sobic007G166400 Sobic007G166400 Sobic007G118100--Sobic007G166400 Sobic002G347000 Sobic002G347000 Sobic007G118100--Sobic002G347000 Sobic007G167900 Sobic007G167900 Sobic007G118100--Sobic007G167900 Sobic009G049300 Sobic009G049300 Sobic007G118100--Sobic009G049300 Sobic001G497900 Sobic001G497900 Sobic007G118100--Sobic001G497900 Sobic007G189000 Sobic007G189000 Sobic007G118100--Sobic007G189000 Sobic007G166100 Sobic007G166100 Sobic007G118100--Sobic007G166100 Sobic010G000300--Sobic007G166100 Sobic001G218800 Sobic001G218800 Sobic010G000300--Sobic001G218800 Sobic010G000300--Sobic010G037400 Sobic010G000300--Sobic002G347000 Sobic003G123000 Sobic003G123000 Sobic010G000300--Sobic003G123000 Sobic001G114500 Sobic001G114500 Sobic010G000300--Sobic001G114500 Sobic003G071000 Sobic003G071000 Sobic010G000300--Sobic003G071000 Sobic003G273400 Sobic003G273400 Sobic010G000300--Sobic003G273400 Sobic010G000300--Sobic009G049300 Sobic007G091600 Sobic007G091600 Sobic010G037400--Sobic007G091600 Sobic010G037400--Sobic010G000300 Sobic010G266500 Sobic010G266500 Sobic010G037400--Sobic010G266500 Sobic001G249700 Sobic001G249700 Sobic010G037400--Sobic001G249700 Sobic010G037400--Sobic001G114500 Sobic003G220700 Sobic003G220700 Sobic010G037400--Sobic003G220700 Sobic004G186000 Sobic004G186000 Sobic010G037400--Sobic004G186000 Sobic009G164000 Sobic009G164000 Sobic010G037400--Sobic009G164000 Sobic002G242200 Sobic002G242200 Sobic010G037400--Sobic002G242200 Sobic006G101700 Sobic006G101700 Sobic007G166400--Sobic006G101700 Sobic003G264200 Sobic003G264200 Sobic007G166400--Sobic003G264200 Sobic009G222500 Sobic009G222500 Sobic007G166400--Sobic009G222500 Sobic006G049700 Sobic006G049700 Sobic007G166400--Sobic006G049700 Sobic007G166400--Sobic007G167900 Sobic004G066200 Sobic004G066200 Sobic007G166400--Sobic004G066200 Sobic006G044600 Sobic006G044600 Sobic007G166400--Sobic006G044600 Sobic008G153500 Sobic008G153500 Sobic007G166400--Sobic008G153500 Sobic007G166400--Sobic001G114500 Sobic003G143200 Sobic003G143200 Sobic002G347000--Sobic003G143200 Sobic005G160400 Sobic005G160400 Sobic002G347000--Sobic005G160400 Sobic001G309400 Sobic001G309400 Sobic002G347000--Sobic001G309400 Sobic006G180000 Sobic006G180000 Sobic002G347000--Sobic006G180000 Sobic007G115200 Sobic007G115200 Sobic002G347000--Sobic007G115200 Sobic006G199200 Sobic006G199200 Sobic002G347000--Sobic006G199200 Sobic002G347000--Sobic007G167900 Sobic001G281600 Sobic001G281600 Sobic002G347000--Sobic001G281600 Sobic008G076800 Sobic008G076800 Sobic002G347000--Sobic008G076800 Sobic001G085100 Sobic001G085100 Sobic007G167900--Sobic001G085100 Sobic009G192000 Sobic009G192000 Sobic007G167900--Sobic009G192000 Sobic004G092500 Sobic004G092500 Sobic007G167900--Sobic004G092500 Sobic001G206900 Sobic001G206900 Sobic007G167900--Sobic001G206900 Sobic002G047700 Sobic002G047700 Sobic007G167900--Sobic002G047700 Sobic007G167900--Sobic006G101700 Sobic010G020400 Sobic010G020400 Sobic007G167900--Sobic010G020400 Sobic007G167900--Sobic009G222500 Sobic001G341500 Sobic001G341500 Sobic007G167900--Sobic001G341500 Sobic009G049300--Sobic005G160400 Sobic007G078600 Sobic007G078600 Sobic009G049300--Sobic007G078600 Sobic006G096900 Sobic006G096900 Sobic009G049300--Sobic006G096900 Sobic010G082700 Sobic010G082700 Sobic009G049300--Sobic010G082700 Sobic001G080700 Sobic001G080700 Sobic009G049300--Sobic001G080700 Sobic010G021500 Sobic010G021500 Sobic009G049300--Sobic010G021500 Sobic007G136800 Sobic007G136800 Sobic009G049300--Sobic007G136800 Sobic002G121600 Sobic002G121600 Sobic009G049300--Sobic002G121600 Sobic007G159500 Sobic007G159500 Sobic009G049300--Sobic007G159500 Sobic002G034600 Sobic002G034600 Sobic001G497900--Sobic002G034600 Sobic003G355000 Sobic003G355000 Sobic001G497900--Sobic003G355000 Sobic009G198100 Sobic009G198100 Sobic001G497900--Sobic009G198100 Sobic001G473600 Sobic001G473600 Sobic001G497900--Sobic001G473600 Sobic006G121300 Sobic006G121300 Sobic001G497900--Sobic006G121300 Sobic001G497900--Sobic007G091600 Sobic001G356600 Sobic001G356600 Sobic001G497900--Sobic001G356600 Sobic010G095700 Sobic010G095700 Sobic001G497900--Sobic010G095700 Sobic001G395100 Sobic001G395100 Sobic001G497900--Sobic001G395100 Sobic007G056500 Sobic007G056500 Sobic007G189000--Sobic007G056500 Sobic007G105900 Sobic007G105900 Sobic007G189000--Sobic007G105900 Sobic009G124700 Sobic009G124700 Sobic007G189000--Sobic009G124700 Sobic001G169600 Sobic001G169600 Sobic007G189000--Sobic001G169600 Sobic001G106100 Sobic001G106100 Sobic007G189000--Sobic001G106100 Sobic007G189000--Sobic002G347000 Sobic006G219000 Sobic006G219000 Sobic007G189000--Sobic006G219000 Sobic009G224000 Sobic009G224000 Sobic007G189000--Sobic009G224000 Sobic009G160600 Sobic009G160600 Sobic007G189000--Sobic009G160600 Sobic001G395400 Sobic001G395400 Sobic007G166100--Sobic001G395400 Sobic010G000900 Sobic010G000900 Sobic007G166100--Sobic010G000900 Sobic004G356900 Sobic004G356900 Sobic007G166100--Sobic004G356900 Sobic002G400000 Sobic002G400000 Sobic007G166100--Sobic002G400000 Sobic004G104900 Sobic004G104900 Sobic007G166100--Sobic004G104900 Sobic009G004600 Sobic009G004600 Sobic007G166100--Sobic009G004600 Sobic007G166100--Sobic001G085100 Sobic010G027600 Sobic010G027600 Sobic007G166100--Sobic010G027600 Sobic007G166100--Sobic004G066200
Octagon: transcription factors


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