Gene annotation
Transcriptome id Sobic.001G009300.1,Sobic.001G009300.2
Synonym Sb01g000910, DER2.2
Functional annotation Der1-like family domain containing protein, expressed
UniProt C5WS18 , A0A1B6QGQ2
Pfam PF04511
Panther DB PTHR11009
NCBI CDD KOG0858; Predicted membrane protein
KEGG Orthology K13989; Derlin-2/3
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G04860 : DERLIN-2.2
RAP-DB (Rice) LOC_Os03g63520.1 : Der1-like family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009076 , Zm00025a016316
Brachypodium KQK12054
Barley HORVU5Hr1G123160.2 , HORVU5Hr1G123160.3
Wheat TraesCS5D02G557200 , TraesCS5B02G539000 , TraesCS4A02G326100
Populus -


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cDNA sequences
Sobic.001G009300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -
2 Sobic.008G073000 expressed protein -
3 Sobic.002G045400 MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
4 Sobic.003G189900 expressed protein -
5 Sobic.003G355000 Transcription initiation factor TFIID subunit A containing protein, expressed K03126: transcription initiation factor TFIID subunit 12
6 Sobic.001G215400 OsFBX387 - F-box domain containing protein, expressed -
7 Sobic.006G161000 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
8 Sobic.009G017200 transporter family protein, putative, expressed K15276: SLC35B2, solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
9 Sobic.006G278200 RNA-binding region RNP-1, putative, expressed -
10 Sobic.003G051700 universal stress protein domain containing protein, putative, expressed -
11 Sobic.010G095700 DCN1-like protein 2, putative, expressed K17822: DCN1-like protein 1/2
12 Sobic.003G417900 cullin-1, putative, expressed -
13 Sobic.009G137900 OsFBL9 - F-box domain and LRR containing protein, expressed -
14 Sobic.001G497900 XS domain containing protein, expressed -
15 Sobic.009G042400 OsFBX159 - F-box domain containing protein, expressed -
16 Sobic.002G159200 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
17 Sobic.009G160600 Yip1 domain containing protein, expressed -
18 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
19 Sobic.009G198100 expressed protein -
20 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1


Gene co-expression network
sample Sobic001G009300 Sobic001G009300 Sobic008G058800 Sobic008G058800 Sobic001G009300--Sobic008G058800 Sobic008G073000 Sobic008G073000 Sobic001G009300--Sobic008G073000 Sobic002G045400 Sobic002G045400 Sobic001G009300--Sobic002G045400 Sobic003G189900 Sobic003G189900 Sobic001G009300--Sobic003G189900 Sobic003G355000 Sobic003G355000 Sobic001G009300--Sobic003G355000 Sobic001G215400 Sobic001G215400 Sobic001G009300--Sobic001G215400 Sobic006G161000 Sobic006G161000 Sobic001G009300--Sobic006G161000 Sobic009G017200 Sobic009G017200 Sobic001G009300--Sobic009G017200 Sobic006G278200 Sobic006G278200 Sobic001G009300--Sobic006G278200 Sobic001G042200 Sobic001G042200 Sobic008G058800--Sobic001G042200 Sobic009G129600 Sobic009G129600 Sobic008G058800--Sobic009G129600 Sobic006G248500 Sobic006G248500 Sobic008G058800--Sobic006G248500 Sobic003G205501 Sobic003G205501 Sobic008G058800--Sobic003G205501 Sobic010G077500 Sobic010G077500 Sobic008G058800--Sobic010G077500 Sobic002G264200 Sobic002G264200 Sobic008G058800--Sobic002G264200 Sobic007G026000 Sobic007G026000 Sobic008G058800--Sobic007G026000 Sobic008G127400 Sobic008G127400 Sobic008G058800--Sobic008G127400 Sobic004G180900 Sobic004G180900 Sobic008G058800--Sobic004G180900 Sobic005G030300 Sobic005G030300 Sobic008G073000--Sobic005G030300 Sobic008G073000--Sobic002G045400 Sobic002G095700 Sobic002G095700 Sobic008G073000--Sobic002G095700 Sobic008G101800 Sobic008G101800 Sobic008G073000--Sobic008G101800 Sobic001G202266 Sobic001G202266 Sobic008G073000--Sobic001G202266 Sobic008G073000--Sobic006G278200 Sobic008G165100 Sobic008G165100 Sobic008G073000--Sobic008G165100 Sobic010G174800 Sobic010G174800 Sobic008G073000--Sobic010G174800 Sobic002G067800 Sobic002G067800 Sobic008G073000--Sobic002G067800 Sobic002G045400--Sobic008G073000 Sobic002G045400--Sobic003G355000 Sobic003G433500 Sobic003G433500 Sobic002G045400--Sobic003G433500 Sobic008G174300 Sobic008G174300 Sobic002G045400--Sobic008G174300 Sobic002G045400--Sobic008G101800 Sobic009G198100 Sobic009G198100 Sobic002G045400--Sobic009G198100 Sobic009G216000 Sobic009G216000 Sobic002G045400--Sobic009G216000 Sobic010G202600 Sobic010G202600 Sobic002G045400--Sobic010G202600 Sobic002G045400--Sobic005G030300 Sobic001G390500 Sobic001G390500 Sobic003G189900--Sobic001G390500 Sobic001G309100 Sobic001G309100 Sobic003G189900--Sobic001G309100 Sobic008G108500 Sobic008G108500 Sobic003G189900--Sobic008G108500 Sobic007G038800 Sobic007G038800 Sobic003G189900--Sobic007G038800 Sobic002G176400 Sobic002G176400 Sobic003G189900--Sobic002G176400 Sobic003G311000 Sobic003G311000 Sobic003G189900--Sobic003G311000 Sobic001G083600 Sobic001G083600 Sobic003G189900--Sobic001G083600 Sobic006G002500 Sobic006G002500 Sobic003G189900--Sobic006G002500 Sobic010G071200 Sobic010G071200 Sobic003G189900--Sobic010G071200 Sobic003G355000--Sobic009G198100 Sobic002G034600 Sobic002G034600 Sobic003G355000--Sobic002G034600 Sobic003G355000--Sobic002G045400 Sobic003G355000--Sobic003G433500 Sobic003G355000--Sobic008G174300 Sobic001G517500 Sobic001G517500 Sobic003G355000--Sobic001G517500 Sobic007G118200 Sobic007G118200 Sobic003G355000--Sobic007G118200 Sobic010G033400 Sobic010G033400 Sobic003G355000--Sobic010G033400 Sobic001G497900 Sobic001G497900 Sobic003G355000--Sobic001G497900 Sobic003G289400 Sobic003G289400 Sobic001G215400--Sobic003G289400 Sobic009G151200 Sobic009G151200 Sobic001G215400--Sobic009G151200 Sobic010G235600 Sobic010G235600 Sobic001G215400--Sobic010G235600 Sobic001G215400--Sobic008G058800 Sobic001G246500 Sobic001G246500 Sobic001G215400--Sobic001G246500 Sobic009G137100 Sobic009G137100 Sobic001G215400--Sobic009G137100 Sobic001G215400--Sobic008G127400 Sobic001G215400--Sobic007G026000 Sobic009G195200 Sobic009G195200 Sobic001G215400--Sobic009G195200 Sobic003G038100 Sobic003G038100 Sobic006G161000--Sobic003G038100 Sobic004G049700 Sobic004G049700 Sobic006G161000--Sobic004G049700 Sobic001G405300 Sobic001G405300 Sobic006G161000--Sobic001G405300 Sobic006G186400 Sobic006G186400 Sobic006G161000--Sobic006G186400 Sobic006G161000--Sobic010G077500 Sobic006G161000--Sobic007G026000 Sobic003G114500 Sobic003G114500 Sobic006G161000--Sobic003G114500 Sobic006G161000--Sobic004G180900 Sobic007G146900 Sobic007G146900 Sobic006G161000--Sobic007G146900 Sobic009G017200--Sobic004G180900 Sobic009G059400 Sobic009G059400 Sobic009G017200--Sobic009G059400 Sobic009G137900 Sobic009G137900 Sobic009G017200--Sobic009G137900 Sobic009G017200--Sobic008G058800 Sobic006G144000 Sobic006G144000 Sobic009G017200--Sobic006G144000 Sobic001G425000 Sobic001G425000 Sobic009G017200--Sobic001G425000 Sobic009G017200--Sobic001G042200 Sobic009G017200--Sobic010G077500 Sobic005G198200 Sobic005G198200 Sobic009G017200--Sobic005G198200 Sobic006G278200--Sobic002G095700 Sobic006G278200--Sobic008G073000 Sobic005G072400 Sobic005G072400 Sobic006G278200--Sobic005G072400 Sobic006G278200--Sobic005G030300 Sobic006G278200--Sobic001G202266 Sobic002G341100 Sobic002G341100 Sobic006G278200--Sobic002G341100 Sobic006G278200--Sobic009G137900 Sobic002G089900 Sobic002G089900 Sobic006G278200--Sobic002G089900 Sobic006G278200--Sobic002G067800
Octagon: transcription factors


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