Gene annotation
Transcriptome id Sobic.007G142700.1
Synonym Sb07g021800, ADAP
Functional annotation AP2 domain containing protein, expressed
UniProt A0A1Z5RAE8
Pfam PF00847
Panther DB PTHR32467 PTHR32467:SF14
NCBI CDD -
KEGG Orthology K09285; OVM, AP2-like factor, ANT lineage
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0007275multicellular organism development


Orthologs (automatic annotation)
TAIR AT3G54320 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os12g03290.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044949 , Zm00025a009489 , Zm00025a016203 , Zm00025a047064 , Zm00025a005840
Brachypodium KQJ90293 , PNT68181 , PNT68180 , PNT68183 , PNT68182 , KQK19882 , PNT68173 , PNT68174 , PNT68175 , PNT68176 , PNT68177 , PNT68178 , PNT68179 , KQJ98420
Barley -
Wheat TraesCS5A02G405400 , TraesCS6A02G125700 , TraesCS6B02G153800 , TraesCS5D02G229400 , TraesCS5B02G410200 , TraesCS5B02G220400 , TraesCS5B02G220400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G020300 AT hook motif domain containing protein, expressed -
2 Sobic.001G028600 expressed protein -
3 Sobic.003G357600 laccase precursor protein, putative, expressed K05909: laccase
4 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
5 Sobic.007G099500 hypothetical protein -
6 Sobic.003G393300 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
7 Sobic.007G035600 MSP domain containing protein, putative, expressed -
8 Sobic.001G056300 BHLH transcription factor, putative, expressed -
9 Sobic.002G285200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
10 Sobic.001G347600 paramyosin, putative, expressed -
11 Sobic.003G357500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@laccase precursor protein, putative, expressed K05909: laccase
12 Sobic.005G054000 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
13 Sobic.K016900 arginyl-tRNA--protein transferase 1, putative, expressed -
14 Sobic.004G212800 - -
15 Sobic.006G273100 - -
16 Sobic.002G017300 expressed protein -
17 Sobic.002G221700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
18 Sobic.004G164600 - -
19 Sobic.004G020401 - -
20 Sobic.001G359400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic007G142700 Sobic007G142700 Sobic007G020300 Sobic007G020300 Sobic007G142700--Sobic007G020300 Sobic001G028600 Sobic001G028600 Sobic007G142700--Sobic001G028600 Sobic003G357600 Sobic003G357600 Sobic007G142700--Sobic003G357600 Sobic007G073400 Sobic007G073400 Sobic007G142700--Sobic007G073400 Sobic007G099500 Sobic007G099500 Sobic007G142700--Sobic007G099500 Sobic003G393300 Sobic003G393300 Sobic007G142700--Sobic003G393300 Sobic007G035600 Sobic007G035600 Sobic007G142700--Sobic007G035600 Sobic001G056300 Sobic001G056300 Sobic007G142700--Sobic001G056300 Sobic002G285200 Sobic002G285200 Sobic007G142700--Sobic002G285200 Sobic006G130501 Sobic006G130501 Sobic007G020300--Sobic006G130501 Sobic006G213100 Sobic006G213100 Sobic007G020300--Sobic006G213100 Sobic007G020300--Sobic007G035600 Sobic006G098200 Sobic006G098200 Sobic007G020300--Sobic006G098200 Sobic001G216600 Sobic001G216600 Sobic007G020300--Sobic001G216600 Sobic004G086100 Sobic004G086100 Sobic007G020300--Sobic004G086100 Sobic005G096000 Sobic005G096000 Sobic007G020300--Sobic005G096000 Sobic005G096300 Sobic005G096300 Sobic007G020300--Sobic005G096300 Sobic002G017300 Sobic002G017300 Sobic007G020300--Sobic002G017300 Sobic002G007250 Sobic002G007250 Sobic001G028600--Sobic002G007250 Sobic004G212800 Sobic004G212800 Sobic001G028600--Sobic004G212800 Sobic002G108800 Sobic002G108800 Sobic001G028600--Sobic002G108800 Sobic001G028600--Sobic002G285200 Sobic001G345333 Sobic001G345333 Sobic001G028600--Sobic001G345333 Sobic007G156500 Sobic007G156500 Sobic001G028600--Sobic007G156500 Sobic010G248200 Sobic010G248200 Sobic001G028600--Sobic010G248200 Sobic002G253500 Sobic002G253500 Sobic001G028600--Sobic002G253500 Sobic008G161401 Sobic008G161401 Sobic001G028600--Sobic008G161401 Sobic003G357500 Sobic003G357500 Sobic003G357600--Sobic003G357500 Sobic003G057800 Sobic003G057800 Sobic003G357600--Sobic003G057800 Sobic003G357600--Sobic007G073400 Sobic003G357600--Sobic010G248200 Sobic004G020401 Sobic004G020401 Sobic003G357600--Sobic004G020401 Sobic002G150766 Sobic002G150766 Sobic003G357600--Sobic002G150766 Sobic004G143700 Sobic004G143700 Sobic003G357600--Sobic004G143700 Sobic007G023700 Sobic007G023700 Sobic003G357600--Sobic007G023700 Sobic001G272000 Sobic001G272000 Sobic003G357600--Sobic001G272000 Sobic007G073400--Sobic004G212800 Sobic004G164600 Sobic004G164600 Sobic007G073400--Sobic004G164600 Sobic004G076732 Sobic004G076732 Sobic007G073400--Sobic004G076732 Sobic008G009500 Sobic008G009500 Sobic007G073400--Sobic008G009500 Sobic009G113600 Sobic009G113600 Sobic007G073400--Sobic009G113600 Sobic008G031350 Sobic008G031350 Sobic007G073400--Sobic008G031350 Sobic008G042250 Sobic008G042250 Sobic007G073400--Sobic008G042250 Sobic005G110430 Sobic005G110430 Sobic007G073400--Sobic005G110430 Sobic007G073400--Sobic004G143700 Sobic009G059600 Sobic009G059600 Sobic007G099500--Sobic009G059600 Sobic007G099500--Sobic004G164600 Sobic002G090400 Sobic002G090400 Sobic007G099500--Sobic002G090400 Sobic007G099500--Sobic007G073400 Sobic003G424100 Sobic003G424100 Sobic007G099500--Sobic003G424100 Sobic004G240900 Sobic004G240900 Sobic007G099500--Sobic004G240900 Sobic007G099500--Sobic008G031350 Sobic007G099500--Sobic004G212800 Sobic002G221700 Sobic002G221700 Sobic007G099500--Sobic002G221700 SobicK016900 SobicK016900 Sobic003G393300--SobicK016900 Sobic002G115801 Sobic002G115801 Sobic003G393300--Sobic002G115801 SobicK009900 SobicK009900 Sobic003G393300--SobicK009900 Sobic004G198000 Sobic004G198000 Sobic003G393300--Sobic004G198000 Sobic005G167300 Sobic005G167300 Sobic003G393300--Sobic005G167300 Sobic009G157500 Sobic009G157500 Sobic003G393300--Sobic009G157500 Sobic001G451000 Sobic001G451000 Sobic003G393300--Sobic001G451000 Sobic001G287301 Sobic001G287301 Sobic003G393300--Sobic001G287301 Sobic003G393300--Sobic001G272000 Sobic007G205800 Sobic007G205800 Sobic007G035600--Sobic007G205800 Sobic001G347600 Sobic001G347600 Sobic007G035600--Sobic001G347600 Sobic003G324000 Sobic003G324000 Sobic007G035600--Sobic003G324000 Sobic003G093600 Sobic003G093600 Sobic007G035600--Sobic003G093600 Sobic007G035600--Sobic004G143700 Sobic009G198900 Sobic009G198900 Sobic007G035600--Sobic009G198900 Sobic001G368400 Sobic001G368400 Sobic007G035600--Sobic001G368400 Sobic009G087800 Sobic009G087800 Sobic007G035600--Sobic009G087800 Sobic007G035600--SobicK016900 Sobic001G056300--Sobic007G073400 Sobic001G056300--Sobic009G113600 Sobic001G056300--Sobic008G009500 Sobic002G062300 Sobic002G062300 Sobic001G056300--Sobic002G062300 SobicK024000 SobicK024000 Sobic001G056300--SobicK024000 Sobic001G056300--Sobic007G099500 Sobic002G376800 Sobic002G376800 Sobic001G056300--Sobic002G376800 Sobic001G056300--Sobic004G164600 Sobic003G044900 Sobic003G044900 Sobic001G056300--Sobic003G044900 Sobic002G285200--Sobic004G076732 Sobic002G410200 Sobic002G410200 Sobic002G285200--Sobic002G410200 Sobic007G115000 Sobic007G115000 Sobic002G285200--Sobic007G115000 Sobic002G285200--Sobic004G212800 Sobic002G285200--SobicK009900 Sobic001G253100 Sobic001G253100 Sobic002G285200--Sobic001G253100 Sobic002G285200--Sobic004G164600 Sobic002G285200--Sobic007G073400 Sobic002G285200--Sobic003G424100
Octagon: transcription factors


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