Gene annotation
Transcriptome id Sobic.007G153900.1
Synonym NIA2, CHL3, Sb07g022750, NR2, B29, NR, ATNR2, NIA2-1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
nitrate reductase, putative, expressed
UniProt C5YM76
Pfam PF00173 PF00970 PF00175 PF00174 PF03404
Panther DB PTHR19370 PTHR19370:SF100
NCBI CDD -
KEGG Orthology K10534; nitrate reductase (NAD(P)H)
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G77760 : nitrate reductase 1
RAP-DB (Rice) LOC_Os08g36480.1 : nitrate reductase, putative, expressed
MaizeGDB (Corn) Zm00025a005399 , Zm00025a033068 , Zm00025a030626 , Zm00025a022255 , Zm00025a049635 , Zm00025a021370
Brachypodium KQK01703 , KQJ98598
Barley HORVU6Hr1G003300.4 , HORVU6Hr1G003300.2 , HORVU6Hr1G003300.3 , HORVU6Hr1G003300.1
Wheat TraesCS6B02G356800 , TraesCS7D02G073700 , TraesCS6A02G017500 , TraesCS6A02G017500 , TraesCS4A02G376700 , TraesCS7A02G078500 , TraesCS6A02G326200 , TraesCS6D02G306000 , TraesCS6B02G024900 , TraesCS6D02G020700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G372400 amidophosphoribosyltransferase, chloroplast precursor, putative, expressed K00764: purF, amidophosphoribosyltransferase
2 Sobic.005G089600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
3 Sobic.003G371250 - -
4 Sobic.002G402700 -(PubMedID : 26976818)@ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed K00284: GLU, glutamate synthase (ferredoxin)
5 Sobic.006G093100 ferric-chelate reductase, putative, expressed -
6 Sobic.001G183000 peptidase M50 family protein, putative, expressed -
7 Sobic.001G521200 expressed protein -
8 Sobic.004G006400 cytochrome P450, putative, expressed -
9 Sobic.002G005600 Aldolase-type TIM barrel family protein(PubMedID : 26465154)@SOR/SNZ family protein, putative, expressed K06215: pdxS, pyridoxal 5'-phosphate synthase pdxS subunit
10 Sobic.003G097600 - -
11 Sobic.006G168650 - -
12 Sobic.003G154300 OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
13 Sobic.010G079000 Phosphotyrosine protein phosphatases superfamily protein(PubMedID : 26465154)@Phosphotyrosine protein phosphatases superfamily protein(PubMedID : 26465154)@tyrosine phosphatase family protein, putative, expressed K18045: SIW14, tyrosine-protein phosphatase SIW14
14 Sobic.003G037300 Twin LOV 1, putative, expressed -
15 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
16 Sobic.008G033200 stem-specific protein TSJT1, putative, expressed -
17 Sobic.002G230700 - -
18 Sobic.005G001700 mitochondrial substrate carrier family protein, putative, expressed -
19 Sobic.003G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
20 Sobic.004G165500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic007G153900 Sobic007G153900 Sobic003G372400 Sobic003G372400 Sobic007G153900--Sobic003G372400 Sobic005G089600 Sobic005G089600 Sobic007G153900--Sobic005G089600 Sobic003G371250 Sobic003G371250 Sobic007G153900--Sobic003G371250 Sobic002G402700 Sobic002G402700 Sobic007G153900--Sobic002G402700 Sobic006G093100 Sobic006G093100 Sobic007G153900--Sobic006G093100 Sobic001G183000 Sobic001G183000 Sobic007G153900--Sobic001G183000 Sobic001G521200 Sobic001G521200 Sobic007G153900--Sobic001G521200 Sobic004G006400 Sobic004G006400 Sobic007G153900--Sobic004G006400 Sobic002G005600 Sobic002G005600 Sobic007G153900--Sobic002G005600 Sobic004G215800 Sobic004G215800 Sobic003G372400--Sobic004G215800 Sobic002G056500 Sobic002G056500 Sobic003G372400--Sobic002G056500 Sobic005G231500 Sobic005G231500 Sobic003G372400--Sobic005G231500 Sobic003G097600 Sobic003G097600 Sobic003G372400--Sobic003G097600 Sobic007G105500 Sobic007G105500 Sobic003G372400--Sobic007G105500 Sobic003G314000 Sobic003G314000 Sobic003G372400--Sobic003G314000 Sobic003G372400--Sobic006G093100 Sobic008G129900 Sobic008G129900 Sobic003G372400--Sobic008G129900 Sobic003G372400--Sobic003G371250 Sobic003G431700 Sobic003G431700 Sobic005G089600--Sobic003G431700 Sobic003G367500 Sobic003G367500 Sobic005G089600--Sobic003G367500 Sobic008G053200 Sobic008G053200 Sobic005G089600--Sobic008G053200 Sobic003G398800 Sobic003G398800 Sobic005G089600--Sobic003G398800 Sobic002G324500 Sobic002G324500 Sobic005G089600--Sobic002G324500 Sobic003G431900 Sobic003G431900 Sobic005G089600--Sobic003G431900 Sobic001G519800 Sobic001G519800 Sobic005G089600--Sobic001G519800 Sobic002G036000 Sobic002G036000 Sobic005G089600--Sobic002G036000 Sobic005G089600--Sobic003G371250 Sobic003G371250--Sobic005G089600 Sobic003G371250--Sobic003G097600 Sobic004G202200 Sobic004G202200 Sobic003G371250--Sobic004G202200 Sobic002G306800 Sobic002G306800 Sobic003G371250--Sobic002G306800 Sobic001G180200 Sobic001G180200 Sobic003G371250--Sobic001G180200 Sobic003G094100 Sobic003G094100 Sobic003G371250--Sobic003G094100 Sobic007G006400 Sobic007G006400 Sobic003G371250--Sobic007G006400 Sobic003G371250--Sobic008G129900 Sobic001G289500 Sobic001G289500 Sobic003G371250--Sobic001G289500 Sobic008G033000 Sobic008G033000 Sobic002G402700--Sobic008G033000 Sobic002G402700--Sobic008G129900 Sobic001G217900 Sobic001G217900 Sobic002G402700--Sobic001G217900 Sobic002G206300 Sobic002G206300 Sobic002G402700--Sobic002G206300 Sobic001G504400 Sobic001G504400 Sobic002G402700--Sobic001G504400 Sobic005G001700 Sobic005G001700 Sobic002G402700--Sobic005G001700 Sobic001G540600 Sobic001G540600 Sobic002G402700--Sobic001G540600 Sobic010G231300 Sobic010G231300 Sobic002G402700--Sobic010G231300 Sobic001G378100 Sobic001G378100 Sobic002G402700--Sobic001G378100 Sobic006G093100--Sobic004G215800 Sobic002G390100 Sobic002G390100 Sobic006G093100--Sobic002G390100 Sobic003G036200 Sobic003G036200 Sobic006G093100--Sobic003G036200 Sobic002G196600 Sobic002G196600 Sobic006G093100--Sobic002G196600 Sobic006G093100--Sobic007G105500 Sobic008G033200 Sobic008G033200 Sobic006G093100--Sobic008G033200 Sobic003G042900 Sobic003G042900 Sobic006G093100--Sobic003G042900 Sobic006G093100--Sobic008G033000 Sobic002G404800 Sobic002G404800 Sobic006G093100--Sobic002G404800 Sobic006G101500 Sobic006G101500 Sobic001G183000--Sobic006G101500 Sobic002G258600 Sobic002G258600 Sobic001G183000--Sobic002G258600 Sobic009G237000 Sobic009G237000 Sobic001G183000--Sobic009G237000 Sobic001G134700 Sobic001G134700 Sobic001G183000--Sobic001G134700 Sobic004G211600 Sobic004G211600 Sobic001G183000--Sobic004G211600 Sobic008G006100 Sobic008G006100 Sobic001G183000--Sobic008G006100 Sobic003G160800 Sobic003G160800 Sobic001G183000--Sobic003G160800 Sobic001G183000--Sobic001G521200 Sobic001G183000--Sobic005G001700 Sobic001G521200--Sobic001G183000 Sobic001G521200--Sobic008G006100 Sobic003G037300 Sobic003G037300 Sobic001G521200--Sobic003G037300 Sobic003G233700 Sobic003G233700 Sobic001G521200--Sobic003G233700 Sobic001G521200--Sobic002G402700 Sobic001G521200--Sobic004G006400 Sobic002G133900 Sobic002G133900 Sobic001G521200--Sobic002G133900 Sobic005G100300 Sobic005G100300 Sobic001G521200--Sobic005G100300 Sobic009G062400 Sobic009G062400 Sobic001G521200--Sobic009G062400 Sobic004G154400 Sobic004G154400 Sobic004G006400--Sobic004G154400 Sobic001G286600 Sobic001G286600 Sobic004G006400--Sobic001G286600 Sobic004G006400--Sobic009G062400 Sobic003G328100 Sobic003G328100 Sobic004G006400--Sobic003G328100 Sobic004G006400--Sobic008G006100 Sobic004G006400--Sobic003G037300 Sobic006G158700 Sobic006G158700 Sobic004G006400--Sobic006G158700 Sobic004G006400--Sobic001G521200 Sobic006G226601 Sobic006G226601 Sobic004G006400--Sobic006G226601 Sobic009G207900 Sobic009G207900 Sobic002G005600--Sobic009G207900 Sobic002G005600--Sobic002G206300 Sobic002G005600--Sobic001G180200 Sobic006G212800 Sobic006G212800 Sobic002G005600--Sobic006G212800 Sobic002G005600--Sobic001G504400 Sobic007G058001 Sobic007G058001 Sobic002G005600--Sobic007G058001 Sobic001G054000 Sobic001G054000 Sobic002G005600--Sobic001G054000 Sobic002G005600--Sobic001G540600 Sobic003G345500 Sobic003G345500 Sobic002G005600--Sobic003G345500
Octagon: transcription factors


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